Array 1 120363-120859 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AEJM01000016.1 Aggregatibacter actinomycetemcomitans serotype e str. SC1083 contig00026, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=================================	==================================	==================
    120363	    33	  97.0	    33	................................T	CCTCTAGTTTTAACTGCTCTTTCAACTTTTCGA 	
    120429	    33	 100.0	    33	.................................	TTACCTGCACCAATCGATTTATTAGTAGTAATA 	
    120495	    33	  97.0	    33	.................G...............	TCCCACGTCTGCGCAATATATTTTGAGCAATAT 	
    120561	    33	  97.0	    33	.................G...............	TCCCACGTCTGCGCAATATATTTTGAGCAATAT 	
    120627	    33	  97.0	    34	..............A..................	AAAACGGTGATGATAAATGCGCCGTTTTGCCTGA	
    120694	    33	 100.0	    34	.................................	ATGACTTTGAATTGTTTTGCAGATCTAGGCAAAA	
    120761	    33	 100.0	    31	.................................	GATGGTGTACTAAACCTGATGTAATGCTAGT   	
    120827	    33	  78.8	     0	..A....C.C..........A....C.....TT	|                                 	
==========	======	======	======	=================================	==================================	==================
         8	    33	  95.8	    33	GCGGCCATCTTCGGGTGACTGTGTGTTGAAACA	                                  	       

# Left flank :   TTTGATCAATGCCGACAATGATTTTGAACAGACTGTATTGCCCATTGGTGCAGGGCTACTGTTAGTCGTAAAAAATAACCGTTAACTGTAGATTGGGTTGCGACGTTCTGTTTAATTCAACTTACAAATGCTTTTAGTCACTCCGAAAACCGATTGGTTAAAAACAAAAAGTGCGGTCTAAAATATACGGAAACTGCAATATATTCCCTGCATTATTCCATCAGGCACATTTTTATTTGGGGAATTTTGTTGGTGCTATCTTTTTTAATAGTATTAACGGCGTACCTTCAGCGATGTGCTTGTTATTCAGTTCGCTAGCCCATGCTTCTCATCAAATTCCTGCAAGCTAGCGATCCTTATTTTCTTTAACAATTTGCAATAGTTAATTCATTTGTATAACGATGACATGCTCGTTATACTTATTCCACTCTCTATTTTGAAATAAGTTAGCGAAAGACAGTAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGTA
# Right flank :  TACTTGGTATACGCTTTTTATGAGCATTTAATCGGTTAAAAATATATGAGCTTGTTGCCTAATGGTAGGGCGGCGTTTAACAAAACGCTCTGTGCGAGTTTGATACTCGCCAAGCTCACTATTTATTGCCCTGCACAATTTTATGTAATCCTTTCTCAATTTTATTCAACATACGGGTAATCTCCAAAAAAACACCTCTAAAATCGACCGCACTTTTCCCCATAAATAAAAAAGCTGAATCTCTCTCGAAATCCAGCTTTTCTTTTACCTATTTATTACGCTAATTCAGTGCGTAATTTTTTCGTGACGTCAACCATGACTTTCAGTTGTTCTAGGGTTTCTTTCCAGCCGCGGGTTTTAAGTCCACAGTCTGGATTTACCCATAAACGCTCTTTTGGCACCACTTGTAACGCTTTACGGAGTAAGTGTTCGATTTCGGCGGCGGTTGGGACGCGTGGGCTATGGATGTCGTACACGCCCGGGCCTATGTCGTTCGGGTA

# Questionable array : NO	 Score: 5.74
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGGCCATCTTCGGGTGACTGTGTGTTGAAACA
# Alternate repeat :   GCGGCCATCTTCGGGTGGCTGTGTGTTGAAACA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.40,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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