Array 1 1724600-1716286 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044450.1 Acinetobacter indicus strain MMS9-2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1724599 28 100.0 32 ............................ AATAATAATATGGTTAAAGTTTAATTATAAAT 1724539 28 100.0 32 ............................ GAGACATCCCGCCATTTACCAAATTCTTTAAT 1724479 28 100.0 32 ............................ TGAAGCTAACTACAAAGTCGATTTGGCCGAGA 1724419 28 100.0 32 ............................ TAATAACTCAAAAATCGGGGTGAATGGTTACT 1724359 28 100.0 32 ............................ ATCAAAGTCGATCTGATCCTTGTACTTGACCC 1724299 28 100.0 32 ............................ TAGTACGTCTGTAGCAGCTGCTCCGGCTGTAG 1724239 28 100.0 32 ............................ ATTGATATACAGGTTTTCACCTTGCGAAATTG 1724179 28 100.0 32 ............................ ATTGGTTTTAGCGACATATTCCGTCTCCGACC 1724119 28 100.0 32 ............................ TTTTGGTTGCGGCTCTCGTACTCCTGCAGTTC 1724059 28 100.0 32 ............................ TTTTGAGCCTTGGCTCGATCAGCAGCTTCACT 1723999 28 100.0 32 ............................ AATCATTGGAGACAAGATTGCTCTACGAACCT 1723939 28 100.0 32 ............................ CATCGCTATACAACGGTTCAGACAAATAAGTC 1723879 28 100.0 32 ............................ AAATGAAGAAGAAGAAAAGCAGATTGAAGCAA 1723819 28 100.0 32 ............................ AAAAAAGCCAATATCAAGGCATTTTTAAGGCT 1723759 28 100.0 32 ............................ AGATTGACACCCTATTAATTCAGGATGACCTA 1723699 28 100.0 32 ............................ TACATGCGTTTTTATCGTGGCTATTGTTAAGC 1723639 28 100.0 32 ............................ ACACTGCGATTTAAGTGCTGCAAATGAATTGT 1723579 28 100.0 32 ............................ ATAATTTGCACCTTCGCTTAGTACAGGTGCTT 1723519 28 100.0 32 ............................ AACACCAACCAGGCGCAATTACCGCGAAACCT 1723459 28 100.0 32 ............................ TGGTATTCCATCCATGCATCCGCATCTTTGAA 1723399 28 100.0 33 ............................ AGATAGTTTTGATCGTGCAAATCAAAGGTGATT 1723338 28 100.0 32 ............................ TTGCGTGCGTAATTCTGCCATTTGCGAGTACT 1723278 28 100.0 32 ............................ TCAATCAAACACATACACAAAAGCAGAAGTAG 1723218 28 100.0 32 ............................ TGTGAAGTGGCATAAATCCCCTGCACATCAAG 1723158 28 100.0 32 ............................ ATTGATTTTGGGGCTTTTTAATATGCAAATTT 1723098 28 100.0 32 ............................ AAAAGGATCTTCTTTTTGATCGCGCTTAGACA 1723038 28 100.0 32 ............................ AATCGACTTTGCAATATATAAGCAGCGTGTTC 1722978 28 100.0 32 ............................ GAGCGCGATGCTGATTTCGATGAGGATTTCGT 1722918 28 100.0 32 ............................ AGCGCTAGGGCATCCATGAATCCAGAGGAATA 1722858 28 100.0 32 ............................ TGCCACTCCATTCATGCGACCAGCACTGCAAA 1722798 28 100.0 32 ............................ AATGCCCGGCGATTTCGTAATCGCACAAAACG 1722738 28 100.0 32 ............................ AGTAGTAGCGTAAATGTCATGAATGGCATGCT 1722678 28 100.0 32 ............................ TTTACAGCTCCGTGTTCACCTATGCAGTTAGA 1722618 28 100.0 32 ............................ AAACCGGAAGTAGAAAAAAAACCTGATAACAG 1722558 28 100.0 32 ............................ TGTAATCGTCATGTCAGCTTTCGGCAATGAAG 1722498 28 100.0 32 ............................ TGGCGTATGAAGCATTGTTGCTTATCGGGGAT 1722438 28 100.0 32 ............................ TTTAATGAAGCAATTTCTTTTGCCCGTAAACC 1722378 28 100.0 32 ............................ ACAGAAACCGAAGCCATTTCCACTAAATTAGA 1722318 28 100.0 32 ............................ ATTTCGGAAATGCAGGATTTCTACAATATGGC 1722258 28 100.0 32 ............................ TTGGCACAATGGTTTAAAGGGAAGGAGAAAAT 1722198 28 100.0 32 ............................ TTTTAGCAAATGAAGTGATTAAACACTTACAC 1722138 28 100.0 32 ............................ ATTGTTCCAAAATTACAAACGTATGATGATGA 1722078 28 100.0 32 ............................ ATTACGATTTACAAGTGAGCGATAGTAAGTTT 1722018 28 100.0 32 ............................ TCTCATGCTCTTTTGAGCGTGGGGGGCTGGAA 1721958 28 100.0 32 ............................ TGAATCGCAATACCCGAAGTGGCATTGGTATC 1721898 28 100.0 32 ............................ AGGCGCGAAATGGCTGTAGCTGCAGATAAGCT 1721838 28 100.0 32 ............................ AGGTAAAGCGATTGGTCTGAACCATCAAAACG 1721778 28 100.0 32 ............................ AGATTTAGATAGAACAACGGCGTTATTCGGAG 1721718 28 100.0 32 ............................ AAAGCCGTTATTTTGTGAGTTTTGATACTCAC 1721658 28 100.0 32 ............................ TACCGTTTTAAAGTCCCATACGAGCAGTTACA 1721598 28 100.0 32 ............................ ATTTAGCTCAATGGTACGAGTGTCAATCAGGA 1721538 28 100.0 32 ............................ AAGGTAAACATTTTCACGATTGAGATATTTAT 1721478 28 100.0 32 ............................ AAGGGATGTGCCGTGGCTACAAGAATGGCAAT 1721418 28 100.0 32 ............................ TCAAGAATGTTACAACAGTACACAATTGTTAA 1721358 28 100.0 32 ............................ AGTTTATGTTTATATAGGCAAGTCACAACATT 1721298 28 100.0 32 ............................ AATAAAGGTAAAGCGTTCTGTTTCATTGTATT 1721238 28 100.0 32 ............................ TTTTCGATGATCAGCCGCCGCCGCACTTCACA 1721178 28 100.0 32 ............................ ATAGATTCCGCAAAGAACCACTCATAAATGCA 1721118 28 100.0 32 ............................ AGGCTTTTAAAAATGAAAACACAAAGTTTCTT 1721058 28 100.0 32 ............................ CACTGATAAACCAATGTTTCCAAAATGAACAT 1720998 28 100.0 32 ............................ TACAGAGCACCTAGAATTTTCAAATTTGCTTA 1720938 28 100.0 32 ............................ TTATCGCCTTCTTTTAAATAACCTAATAGTTC 1720878 28 100.0 32 ............................ GTTCTTAAATATTGAGGGACAGATAGGTATTG 1720818 28 100.0 32 ............................ AACTGAAACATCAGGACGAATAACATAGTCTC 1720758 28 100.0 32 ............................ TTGGTGTTCCCGAAAACTTAAAATACGCTTTT 1720698 28 100.0 32 ............................ TCACAGCCACCTTCTGAGAATTGGAAATTTGC 1720638 28 100.0 32 ............................ TGAGGTGTTCACCGGTTTGATTGGTGTTGCAT 1720578 28 100.0 32 ............................ TACCGAGTTAATTGCGCACCGTGATTCTATAA 1720518 28 100.0 32 ............................ AACTAAAACAACTGGATTCTTTGGAACAATCC 1720458 28 100.0 32 ............................ ATGCTCAAGCTTGTGGTTTTAAAGATGGAAGT 1720398 28 100.0 33 ............................ ACCAGGACACGTTCAACTTCGAGATATTGACAT 1720337 28 100.0 32 ............................ AGATTTACTGGCTGATCTGCGAGAACAACAAA 1720277 28 100.0 32 ............................ GAATAAGCACATTAAAAAACGGAGCATCTTGT 1720217 28 100.0 32 ............................ AATATCCCAATCAGGATGATGCTTGTGTGTTG 1720157 28 100.0 32 ............................ TGAGTGGGGCTGAGCTTGAGTTGAGTTCATCA 1720097 28 100.0 32 ............................ AGATCATGTAGGTCCGGTACTTCAGATGGAGT 1720037 28 100.0 32 ............................ GGCACTTAAACTGCTGAACCAGAATCTGCATC 1719977 28 100.0 32 ............................ TTTCCCTTGTCACATGAGCACAGGCCAGTCTT 1719917 28 100.0 32 ............................ AGTGAATAGCATTCATTTAGTGCCGTGAGATA 1719857 28 100.0 33 ............................ TTCTTTAGCAAACTGCATCACTGTATCTTGGTT 1719796 28 100.0 32 ............................ ATTCAACCATTGCTTCTTGTTTTGAAGTCATA 1719736 28 100.0 32 ............................ ACTAAGAAGGCATACCGCAATCAACCATTCCT 1719676 28 100.0 33 ............................ CCAAAACGTACTCTTTGAATTTGATCAGCTCAT 1719615 28 100.0 32 ............................ AGTAGCTACCGCCGCTATCTCTTGAAGGGTGA 1719555 28 100.0 32 ............................ TAGCGCTTCAAGTGAGCCGTTGTGAACGTGAA 1719495 28 100.0 33 ............................ GGATGGCTCCGTCAAGAAAGATGCTAATGGCAA 1719434 28 100.0 32 ............................ ATCTGACAATACCAAGTCTGAACCAGTAGAAA 1719374 28 100.0 32 ............................ ATGAGAACAAGAACAATATCTACTTGCTTAAA 1719314 28 100.0 32 ............................ AATTGCCACAATCACCAAGAAAGCCAGTACAA 1719254 28 100.0 32 ............................ AATAATTTAGTTGAGTTGTTTGATCTGTTAGA 1719194 28 100.0 32 ............................ TAAGCGACTCTATCCCTCTTATTAACCCCGCA 1719134 28 100.0 32 ............................ TTGTATGATTTGCCTACAGCTACGCTCGTTCA 1719074 28 100.0 32 ............................ AATTTAAACATAAGCTCGGTAGTGATTTTGCT 1719014 28 100.0 33 ............................ AGTAGAGATTAAAGAAAATTTTTATATTCATAC 1718953 28 100.0 32 ............................ GTAAATAAAATTAAATAAGGTTAAAAATTCTT 1718893 28 100.0 32 ............................ TTTAGGGTTAGCAACAAGTAAAATCATATATT 1718833 28 100.0 32 ............................ AGATGATTTGATGTATGCCTGGGAGATGAAGC 1718773 28 100.0 32 ............................ AAACATTATTCCTAGAGAGAAATTAACTGAGA 1718713 28 100.0 32 ............................ GATATAATTCGGGCTTTTGAGAAAAGCTACAG 1718653 28 100.0 32 ............................ TTCAAGATGAAAGTCTTCAATCTCAGCACCCT 1718593 28 100.0 32 ............................ AGGCAAGGAGGGCGGTTTTGCAGTAAGAGAAT 1718533 28 100.0 32 ............................ TGTTGCAACAATACTCGCCGTAGTCACCCCTT 1718473 28 100.0 32 ............................ AAGCACTCCACGCACATTCATTACGTTTGCCA 1718413 28 100.0 32 ............................ ACCAGGCTACACAGCTGAGCAAAGTCGCGGTG 1718353 28 100.0 32 ............................ AGTTGTGAGAGGAAGTGAATCAATCGAAGTGA 1718293 28 100.0 32 ............................ AAGCCAGTAACTGCTGCAGCCCTGGCGCGACT 1718233 28 100.0 32 ............................ TGGCTGCAGCTGAAGAAGCAGGGGAGATTCAA 1718173 28 100.0 32 ............................ ACCGCGGATGGGCACGCGCTCCGCTGTAATAT 1718113 28 100.0 32 ............................ ATACATATTCAACTGATTCTCAAACTGATACT 1718053 28 100.0 32 ............................ TCTTGCTATCCGTCGAGCTAAAGAGTCTCAAT 1717993 28 100.0 32 ............................ TCAATTGAAGCCGCCAAACCAATAATGACAAC 1717933 28 100.0 32 ............................ ACTTGGGTTGGGTGAGGGGGCTGTCGTATCAT 1717873 28 100.0 32 ............................ TGTGGGTCCACGTTTGGCAGACTCAACAACTC 1717813 28 100.0 32 ............................ TGATATGTACCGATAAATATTTCAGGCTTTTC 1717753 28 100.0 32 ............................ GTAGAACTTAATTGTTTTTAACATATCAATCC 1717693 28 100.0 32 ............................ TGGTGACGATCATGTCAGAAGCACCATCGAGT 1717633 28 100.0 32 ............................ AGGCTGAACAAAAGCAACTCGGTCAAATGATT 1717573 28 100.0 32 ............................ TTGCTGTACCATAGTTTCAGATGAAATCAAAA 1717513 28 100.0 32 ............................ TGTGATGGGGCTGTTAAAGCAACTTGAAGCAG 1717453 28 100.0 32 ............................ TTTTTTAGCCAAAAAAGCTACCAAGTTACCTA 1717393 28 100.0 32 ............................ ATGTATCCCGCAAGTTGGCGAGTTGCCACAGA 1717333 28 100.0 32 ............................ TGAGACTCTTCATTACTTAATGACATGCTATC 1717273 28 100.0 32 ............................ AAGCCTATTAGCAATGGCCGGCATGATGGGGC 1717213 28 100.0 32 ............................ AAAGACACTACAGAGAAAATGGGGAAGGCTTT 1717153 28 100.0 32 ............................ AAGATGGCTTTACTAAACTTGCATCTGCACAT 1717093 28 100.0 32 ............................ AGCGTTTAAGGTGGGTTATGGAACAATTCCGG 1717033 28 100.0 32 ............................ TGCAAAATGAATTCCTGAAAATTCAGTGCGAT 1716973 28 100.0 32 ............................ GCGTATTTCACCAGCTCGCATGGCGGTCTCAA 1716913 28 100.0 32 ............................ AACCCAACCTATGGTGAAGTGGAAATCCAAGA 1716853 28 100.0 33 ............................ TCTCCTTTAGCATAATCCTGTTGAATGTCTTTC 1716792 28 100.0 31 ............................ TTGGTGAATTTCATGCAGGTCATTTTTGCCA 1716733 28 100.0 32 ............................ AGCGAACCAGATTGGTCACACTATCTATTTTG 1716673 28 100.0 32 ............................ AGGATCAATCGAATGTCTTTATGAATGGAATC 1716613 28 100.0 32 ............................ GGCCATCCTCATGTGCCAGGTCCTGATAGCAG 1716553 28 100.0 32 ............................ AACATTGCAGATAAATGTGATGCGCTAGGTGT 1716493 28 100.0 32 ............................ CAAATCTCTGCGCTCGTCACGCCCAGCTTGGA 1716433 28 100.0 32 ............................ TCCTTAATTCTTCCGATCTGGACAACATTTCC 1716373 28 100.0 32 ............................ TATTAAGCGTATTAAAAAGAATATTATGAATT 1716313 28 85.7 0 ............G.......T..CT... | ========== ====== ====== ====== ============================ ================================= ================== 139 28 99.9 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TGGAGATAAGAAAGTGGTTAGAACATTTTGAAGATTATGTACATATCACATCAATTCGTGAGGTACCTACAGAAATTAAAGGTTATGCGATCTATAAACGTAAACAGGTAAAAACGAATGCTCAGCGTCTGGCACGGCATCGTATTAAACGTGGAGATATTGGTTTTGAAGAAGCATTAGCACGATATAGCAATGTGGTGACAACCACTGATTTACCCTATATCGAAATGCAGAGCTTAAGCAGCTCAGATGAGCAAAGCAAAAAGCGTTTTAAATTGTTTATTGAAAAACTTCCCGCTGAAAAATCTGAAAATCAGGTTTTTAGCACCTATGGTTTAAGTTCGGAAAGTGCTGTACCTGAATTTTAACCCGATATTTTTTTGACTCTTTAACAGCTTAATAAAATCAATGAGTTATGATGGTAAGTTAAAACTTGGGTCTTTTATAGGTTTTGGACTTTAACTTACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : AATCACCCCAAATAAAACCGGAGCATCTCCCCGGTTTTATTCTTCATCTATTTATTCTTCTAACAGGCTTCTTAACATCCAGGCAGTTTTTTCATGGACTTCCAATCGTTGGGTCAGTACATCCGCAGTTGGCTGGTCATTGGCTTCTTCCACCACATCAAAAATACTGCGTGCGGTACGGGCAACTGTTTCATGGGCACGAACCAATAACTCCACCATTTCATTGGCTTTTGGTACACCTTCGACTTCTTCAATCGACGCCAGTTTTACAAATTCTTTATAGGTTCCCGGCGCCGGAAAACCCAGCGCACGAATCCGCTCGGCAATAACATCCAGTGCATTCCATTGCTCGGTATATTGTGTCATAAACATGGTGTGCAGGCTGTTAAACTGTGGCCCGGTCACGTTCCAGTGGAAATTATGGGTCATTAAATATAGGGTATAACTGTCGGCCAGAAGTCGGGAAAGCCCTTCGACAATTTTGGCCCGGTTATCTTCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //