Array 1 46096-46674 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000023.1 Streptomyces sp. CAI-155 NODE_23_length_83154_cov_449.454, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46096 29 100.0 32 ............................. AGTCGAGGCCCGCCCCCACATCCGGGGGCGGG 46157 29 100.0 32 ............................. TCGCTCGACGGCATCGGCTTGGTGGGGGCGGG 46218 29 100.0 32 ............................. GGGCACTGGGTGGGGTCGAACGGCGGGGCCTT 46279 29 100.0 32 ............................. CCGGTGATTTGCGTACCGGGTACGACGCTGGA 46340 29 100.0 32 ............................. TCGTTCATGGCGTCCATCCGGGTCATGCCGGA 46401 29 100.0 32 ............................. GTGTACCTGCGGGTGGTGTGGGATGTGGAGCT 46462 29 100.0 32 ............................. GTCTCTAGGCAGGAGCACCGGGTGCCTCCTGC 46523 29 100.0 32 ............................. ATCTCGATCAGGAGGGGCAGGGACGTGCCGGG 46584 29 96.6 32 ............................T GCCTCCAGGGCATACGTAGGAACCGCGCAAGT 46645 29 86.2 0 ..C..................AC.....G | A [46670] ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GCGGCCATCGACTCCCCCGTGCGCTTCCTCCGCCACCGTCTGACGACCAAGACCCCACCCCAACTCCCCACCGAAAACACCGGATCGGGCACCACTGCCGCCACCGCCCGCAGCCTCCTCGTCGAATGCACGGAGTGCGGCACCCCGGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCCACAGCAACGGGGCCGTGGACCCGTCACCCGCACCCACCGAGGCACCGGACATCAAGGCCCGCATGGCCAACCTCCGGAACCTCCTCAGAAGCGTCTGAGGCAGGCGACGGCGGTTCAGCATCGATTTGGGCGGCCTCTTATCCGGGAAACGAGCCGCCAGCCTCGGCCAACAGGGGCAGAATCTCCCCAGGCAGGCCCCGAGTCCGGAAACGGCCGTCTGCACGGCGAGGGAGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACGAGCCTCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : GCCTCCGTGGTCGATCCCCCACCGGGCAGTCGGCGCACAGGAACCCTGCTTGTCCGGGCAGTCCGCGAGGTCCGCTGAGTCCGGGCTACAGCGCCTCGCCGGGAATCGACAGATAGGCCTCGCGGAGGCGGCCCAGCAGCGGGTGCTCGGCGGCGAACCCGGTCCCGTCGATGGCCGCCAGGGGGCGGACGCCGATGCCCGCGTTCGTCGCGAAAGCGGCCACCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTGGGCGGGCGGCGTCGGGTGCTCGCGCAGCAGGGCCATGGTGACGCCGGGCAGTACGCCGGATCGTGGCCACAGCACGGTGCCGTCCCGGTCGATGAGGCCCACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCCACGAACAGCGCGTCGTCGTAACCGGCGAGCTGCGCCGCGCGCCGGGCGTGCAGGGCGCCGAACAGCCCGGTGTGCTTGACCTGGGAGAGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 109143-110227 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000003.1 Streptomyces sp. CAI-155 NODE_3_length_505060_cov_440.509, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================== ================== 109143 29 100.0 32 ............................. TTCGTCCGCCCGCCCGGCGGCAACATCAAGGG 109204 29 100.0 32 ............................. GGCCGTCGACCTGCGGGAGGGCGAGCGGATGA 109265 29 100.0 32 ............................. GACAACGACCGCGGCCAGGGCGCCGACGCCGA 109326 29 100.0 32 ............................. GCACCTGGGATATGAGCTGCTGGAGGTCACCG 109387 29 100.0 32 ............................. GGTCCGGCCAGGGACTGCTCCTGGTGGACGAG 109448 29 100.0 32 ............................. CGGGCAACCGGGTGCAACCGGGGGGATCAACC 109509 29 100.0 32 ............................. ATCTGCGAGACGCCGGGCGGCAGGAGGTTGTG 109570 29 100.0 32 ............................. CGCTACAACTTGCCGGGATCGCCCTGTTGCCG 109631 29 100.0 32 ............................. CTGAAGACCGTCCTGCCCGGCGGCCACGGGTG 109692 29 100.0 32 ............................. TTGTACTGGGCGTGCGGGTCGTCAGCCATGGG 109753 29 100.0 32 ............................. CTTCGGGTGTTCCGGAGATGTCGGAGGTGACT 109814 29 100.0 32 ............................. CACCCGGTACCCGTGCCCCATCGGCTGCTCCT 109875 29 100.0 32 ............................. ATCCTTGCTATCCGACCTTGATCAAGGAGAGG 109936 29 100.0 32 ............................. AAGGGCGAGGAGGGACAGGCGGCCCGGTACCT 109997 29 100.0 32 ............................. CGCGTCGACACGTGGCAGTACGGGCCGTACTG 110058 29 100.0 32 ............................. GTCGTACGCGCCCGCTGACCCCGCCCGGCCCG 110119 29 100.0 51 ............................. GGCAACGCTGCCGCGACCGCTGCCGCCCTCGCGTTCCTGGACCGTCTCGCA 110199 28 82.8 0 .............AC......G.-.C... | A [110226] ========== ====== ====== ====== ============================= =================================================== ================== 18 29 99.0 33 GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : CACCGCGCTCACGGCAGGCCTCCCGGCCGAGATCAACTCCCCGGTGGGCTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCACTCCCGCCGCCCGCGTCCTGGTGGAATGCACGGACTGCGGCACACCGGGCCCCTCCGAGGCCCTTCCTGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCAGCCCTGCAACTCCGCCACCCGCCCTGCCCGCACCACCCGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCCGACGGCACCCTATTCAGGGGAACGGGGGTCGGCCTTGGCAACCGAGGGGCAGAATCGCCTCTGGCAGGGCGAGCAGCCGACCCAACGGCGATCAACACGGTGGGGGATATGTCCGTTTCCCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGACCT # Right flank : CTCAGCGAAGCTGGGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGCCGAGGGCCGCGACCGGCTGATCATGACGGCCCGCGGAGGGTCGGGCCGCAGCTACCTAGCCATCAGCCGTGACGGTGTGGATACGGCGCCCCGTATCGTCCCGCCATGATCATGCTATCTGTTGACCCCGTCTCGCGGAGCTACGCCGATGGCCAGGCAGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAGCCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATTTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCCAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGGGCCTGCGGAGATCAAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 74714-75412 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000005.1 Streptomyces sp. CAI-155 NODE_5_length_418277_cov_462.403, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74714 29 100.0 32 ............................. CAGACCGTCTTCCACGATGAGCCGATGGACTG 74775 29 100.0 32 ............................. GCCCAGATGTCGCCCGGTGAGCGGTCGAACAG 74836 29 100.0 32 ............................. ACGATCCGCTTCCCGCGCTTGTACGAATCCAG 74897 29 100.0 32 ............................. TGGCGGGCCGACTTGGAGCCAGATCCGATCTT 74958 29 100.0 32 ............................. TGCTTCAGCTTGGCCAGCTTCTTCTCCAGGCC 75019 29 100.0 32 ............................. GTCGCCTCCGGGCGCAGCGCCTCCGTGATCAG 75080 29 100.0 32 ............................. ACTGCCAGGTGCCCGATCCCCAGACCGTCCAT 75141 29 100.0 31 ............................. CCCCGTCGTGCAGGTGACCGTGGAGCGCGAA 75201 29 100.0 32 ............................. GCGGCGATGGCCTCGGGGACGGTGAGAGAGAA 75262 29 100.0 32 ............................. GTCGGGGGCACGGGCTGCCGGTGGGCCTGCTC 75323 29 100.0 32 ............................. TCCTACCCGGCCGTCGACTACCGGAAGTTGAT 75384 29 89.7 0 .....................A.AG.... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.1 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : AGAACACCTCGCCCGACACTCCGGCCCCGACCGCCCGCCGCATCCTTATGGAATGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAGCCCACAGCACGAAGCCCGGTGAACTCCCGGCCCACCCCACTGAAGCCGCCGACGTCAAGGCCCGCATGAGTAACCTTCGCGACCTGCTCAGAACCGTCTGAGGCTGAAGCCTGCAAGGTCAGTTCGCGCCAGCAGAGAGCGCGGACACGTATCGGGGCACTGGCGCGGCACCCGTTCGCCTTCACAGTTTCCTGGGCAGATGCCGCACGGCCTTCCTTGAGGAAGGGGGCGCCCCCGGGGGTGGTTGGCGGGCAGAATGACCCCTGGCATGCCCAGTCTCGGGTAAGGGCTGGTTGCAACGCGGGAGAGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCGCACGTCACGAACT # Right flank : CGACCGCCCGAAACCGGAAATCGATCATTTTCTGTCGAGTTCGAATCACTTTTGAACAACTGGCCTCTACAGGGCATTTCCGCATGTCAAATGCCCACATGCCCGCGATCGACACGGAACTCCTCACCGCGTTCCGCCACCTCTCCCCCACCGCCCGCACCCCCTGGGGCAAGCACGATCGGCCGACCGAACAGTGGCTCCCCCTGTGGCGGCACATGGCCGACAGTGCAGCCGTGGCAGGCAGGCTCTGGGACGAGTGGGTGCCCGACAACGTGAAGGAGCTGGTCGCGGACGTCTTCCCTCAAGGGGCCGACGACGCACGGCAGGTGGCCGTATACCTCGCCTGTGTGCACGACATCGGCAAGGCCACCCCCGCCTTCGCCTGTCAGGTGGACGGGCTCGCGGACCGGATGCGGGCGGCCGGGCTCGAGATGCCGTATCTGAAGCAGTTCGGGGCGGATCGCAGGATGGCTCCGCACGGGCTGGCCGGGCAACTGCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 380862-380040 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000006.1 Streptomyces sp. CAI-155 NODE_6_length_386889_cov_418.01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 380861 29 96.6 32 .........A................... GCGCCGCCCGCCTTCTCTCGTTGTCGTGGGGC 380800 29 100.0 32 ............................. GCTGGACCCATGCCCGTCACCGTCACCGACAC 380739 29 96.6 32 ...........................T. GGTGTCTCCCAGGTGAGCCGGGCGCCGCGTCT 380678 29 100.0 32 ............................. TCACAAGCCCCTGAGCTTCGAGCGCCTTGTAG 380617 29 100.0 32 ............................. GCGAACTGATGCCCACAGCGATGAGCGCAAAG 380556 29 100.0 32 ............................. CACGAACTGTTCCGGAAGACGGGCTTCTCCGC 380495 29 100.0 32 ............................. TTCGAGCGGCCCGAGGACATCGTGGTGCAGCA 380434 29 100.0 32 ............................. GAGGAATCCCTCACGACCCGGGGCCTGAAGAT 380373 29 100.0 32 ............................. ATGCGCGGAACCTTCGCCGTCGCCAGTGGTTA 380312 29 100.0 32 ............................. GACAACAAGAGCCGAGGGTACGAGCGCAACGA 380251 29 100.0 32 ............................. GCGCCCCGGAAACTCCCGGCCGCGTCTACGTA 380190 29 100.0 32 ............................. TTGTCGCCTGTGATGGGGCGGAGAGCGCCGGT 380129 29 100.0 32 ............................. GCTTCCCCTTCGTCGTCGATGGCGGTGTTGCG 380068 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.3 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CCAATTTGGGCGCCCAGGAGGAGGATTCCAGAAGCCAGTTCACCGATCGCCTGTGGTGAACCAGCATCCGGGGGCCCGCCGTACCGACCCGTCCTGTCTCCGGGCGCGGCGGGGAAATCGGGCGCTTCGGCGGAGGCGGGGTCTTCGGCGGGTGGTCCGGGGCGTGATCCGACACATTGGCTCCAGGGGCGGCGGGGCGCCCATCGTATGGCCGCTCATCACGGCTCTTGCCCCCGATGAGCCGCCCCTTCACCCGTACAGATGGGGCTCCCCGTACAACTTGACGCGATTTTGCGCCAGGTTTAGCAGGCAGGAGGGGACGCGGGGGACGTAGGCGCATACCTGCACAGCGCCTTGCGGTATGCCAACGCAAAGCGCTGCCCGTGCAGCAAGACGTTTGCCGTCGCTGACTGTTCCAGCTCTGTCACCATGTCAGGGTGAGGACGGCAGGCATGAGTCAAGAATTGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGA # Right flank : CGGCCCCAGGCCGAACGCGAATGTCATCGCTCTCCGGCAATACACAGCAGCCCGGCAGCACACAGTTGTGCTGGTGTTCAGGTAGATGCGCGGCGTGCCGCGCCGCGTGGGGTGAAGAAGCTCGCTGCGGCGATTCCGCTGGTGATGAGAAGCAGGGATGCGGTCGCTGCGATGGCAGATGGTGCTTGGTGCAGGGGCCAGGTCCATGGGTAGGGGCGGCCGCCGGGGGCGAGTCCGATGAGTGCGCAGAGGACGGGGACCAGGGTGACGGCCAGCGGGCCGTACAGGTGGCCGAGGAGTTGCTGGATGATGAGGCCGGTGCCGAGGTAGCCGACGAAGTTGCGTGCTGCGGCGAGGGCCATGGAGGAGTCTGCGACGCAGGTGGCGGCGAGTCCGATGGCGACGGCGATCAGCGCGGTTGTTGCCAGCATGCCCGCCCGGTAGTTGGTCACGGGGCGGACTGCGGTGGTGTCGTAGACGCGGGGAACCCTGTTCAGGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 386889-385701 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000006.1 Streptomyces sp. CAI-155 NODE_6_length_386889_cov_418.01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 386888 29 100.0 32 ............................. CGGGCTGTCCCGGCGGCGGTGGAGGCATCTTC 386827 29 100.0 32 ............................. GCCCCGCCGATCACCCGGCCCATGTTGGAGGC 386766 29 100.0 32 ............................. ATGGTGGTCCGCTCCACGAACTTGCGCGCGTA 386705 29 100.0 32 ............................. GCCCGGATTGTCAGTGGAGACCTCAAGGACGG 386644 29 100.0 32 ............................. ATCAGCAGGTTCATGTGCGGGTGCCAGCCGTT 386583 29 100.0 32 ............................. GGAGCGGACGCTGGCTCCTCGTCGGCACGCGG 386522 29 100.0 32 ............................. ACGATCGCCTCGTTGATCGCGCTGCTCGCCGC 386461 29 100.0 32 ............................. CGGGCTGTCCCGGCGGCGGTGGAGGCATCTTC 386400 29 100.0 32 ............................. GCCCCGCCGATCACCCGGCCCATGTTGGAGGC 386339 29 100.0 32 ............................. ATGGTGGTCCGCTCCACGAACTTGCGCGCGTA 386278 29 100.0 32 ............................. GCCCGGATTGTCAGTGGAGACCTCAAGGACGG 386217 29 100.0 32 ............................. ATCAGCAGGTTCATGTGCGGGTGCCAGCCGTT 386156 29 100.0 32 ............................. GGAGCGGACGCTGGCTCCTCGTCGGCACGCGG 386095 29 100.0 32 ............................. ACGATCGCCTCGTTGATCGCGCTGCTCGCCGC 386034 29 100.0 32 ............................. GTCGCCGCCCTGGACGCCCGCCGTTTCTTCCC 385973 29 93.1 31 ..G.....C.................... GACACGTCCAGTGACTACCGCTACCACAACC 385913 29 93.1 32 .G...............A........... ATCCACTGCACGATCGTGACAGCGGCGGAGCC A [385909] 385851 29 89.7 32 ..G..............A..........A ACAGACCGCGCCGACGCGAGGCTGATCGCCTC 385790 29 93.1 32 ..G..............A........... GCTCCGCCGCCGCTGCCCTGTCGTTCGGCTAC 385729 29 86.2 0 .GG........A..........C...... | ========== ====== ====== ====== ============================= ================================ ================== 20 29 97.8 32 GTTGTCCCTGCGCGAGCGGGGGTGTTCCG # Left flank : | # Right flank : GCGCTGATGCTCCTACCGGCGGCGTCGGCCGAACCGACACCCGAGTGGGTACTGACCCGCCACCAGCATTGGGCGACCGAATCCGCACGGCACGCACTGCCCTGAAGGTGTCGCAGGAGCGCCTGTGCGAACTCAGCGGAGTGGACCGGCAGGCGATCAATCGCATCGAGCTGGGCCGTCACGCCACCGCATCGACACGCTGTACCGCATCGCCCGGACACTGAGGGTCCCGCTGTCCGGCCTCGTACGCGAGTAGGGCATGGCCGCGCGCACGGCCATGCCCCCCCCCTGTGGGCTATGTCCTCCTGGGCTGGATGATCGCGGCCGGGTCCCGGAGCCAGATGTGCTGGCCGCGGTCGGTCACAGTCATGCCGAACTGCTCGGCGTCCGGCAGGCCGGCCGACTCGTACTCCTGCCAGACCTGCTCGATCTCGTCCCACAGGAGACCGGGCCCGTACTGCCATGCCTCCTCGCCGGTGGCGGCGGTGGCCGCGGCTCCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCCCTGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.00,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 69403-68281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000016.1 Streptomyces sp. CAI-155 NODE_16_length_187217_cov_429.741, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69402 29 100.0 32 ............................. ATACACCACCTGGCATGCCTTTCAGGTCTGTC 69341 29 100.0 32 ............................. GCGCCGGGACAGCACGGCCCGTCGGACAGCAG 69280 29 100.0 32 ............................. TTGAAGCTGCCGCCGGCGGACGATGTGCCAGT 69219 29 100.0 32 ............................. GTCGATCCATTTCCAGCGGGGGTCCAGTTCGG 69158 29 100.0 32 ............................. CTCAAGACCACCCTGCCGGGTGGCCACGGGTG 69097 29 100.0 32 ............................. CACTGGCTGGCGGGGGAGCGGCTGCAGAACAT 69036 29 100.0 32 ............................. TCCATCCACCGCCCGGCCATCAGCCGCCCACC 68975 29 100.0 32 ............................. AAGGCCGGGAACAGCCCTCCGTCCACGGACCG 68914 29 100.0 32 ............................. AAGGGCACCGTGTCGAAGCTGGTCAAAGCCCT 68853 29 100.0 32 ............................. AGGATCAACGCTGCTGCTCGTGTCGGTGGTGT 68792 29 100.0 32 ............................. TGCTCCACCGGCGGCACCGCCAAGGTCGACAA 68731 29 100.0 32 ............................. TCCCAGTGGACGCAGTACGCCACCAACCAGCT 68670 29 100.0 32 ............................. GCGCCGCCGCCGCCCTGATGATGATCGGAGGC 68609 29 100.0 32 ............................. TGCTGCTTGACCTCGGCCAGCTTGTAGCGGCG 68548 29 100.0 32 ............................. CGGAATCCGTCGACACCGAGTCTCTCGACTGG 68487 29 100.0 32 ............................. TGCACGCGGACTTCTGCCACGTCGCATCCTTC 68426 27 93.1 32 .............--.............. TGTGCGAGGGTCAGCCCGCCGTTATCCGTGGG 68367 28 96.6 32 .....................-....... CCTGTCAGGACGGCACTCCCCCTGACCGTGCC 68307 27 89.7 0 ..A........--................ | ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.9 32 GTGGTCCCCGCGCACGCGGGGATGGTCCC # Left flank : ACCACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAACTCCCCGGTGGGCTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCACTCCCGCCGCCCGCGTCCTGGTGGAATGCACGGAGTGCGGCACACCGGGCCCCTCCGAGGCCCTTCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCAGCCCCGGAATCCCGTCACCCGCCCTGCCCGCACCACCGGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCCGACGGCGCCCTATTCAGGGGAACGGGTGTCGGCCTTGGTGACCGAGGGGCAGAATCGCCTCTGGCAGGCGAGCAGTCCGCCAACGACGATCAGCATGGCGGGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CAGGTGAGCCGTGGGATTCGTGGAACGGTCTGGTGGTCCCCGCACACGGGGCCCCACCCGATCCGGCTCTCCGCCACTGCCTGCCTCCGCCGGATTCGCGGTGGCCGGGCCTTCACCGTCGGCCTCTCGACGGTGAAGGCCCGGCAAGTGGGTACGGTTGAACGGCAGTCGGCCGTCCAGGCCGGCCGGCCCGAAAGGTGAGCGAGCTAGAGGAACCGCCCCGTTCGCGGTGCTCGTCGTCGCCTTCGTCCAGTGCCCGTGCCGGTCACGCCTTCGTGAGATATTCCAAGAGACGGAAGTTGGCGTTGCTGCCGTTGCTGACGAACTCCAGGACACCCAGCTCGGTGCGGATGAGACCGGCCTCCTCCTCCAACTCGGCCAGCTTGTCCCAGTCGCCGGAGTCGTTGAAGCCGAGGAAGAGCCGACCGCCGTCGGTCAGGTGCCGGGGGCCGTCCACGAGGAAGGAGCGGTGGGAGACGTAGCCGGCGTCCATGATGGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 72198-71011 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000016.1 Streptomyces sp. CAI-155 NODE_16_length_187217_cov_429.741, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72197 29 100.0 32 ............................. CACCCGAGACCGAGGGGTCTGGCCGGATGAAG 72136 29 100.0 32 ............................. GGGACATCGAGGCGTTCCGCCGACTCACCACC 72075 29 100.0 32 ............................. AACATCCCGGTCGCCCGGCTCAAGCGGATCTG 72014 29 100.0 32 ............................. GGACTCCATGTCCTCCAGGAACCCGGCCAGGT 71953 29 100.0 32 ............................. CAGCTGCTCCGGGTGTCGGCGCACGAGGGCCA 71892 29 100.0 32 ............................. GCCTTACCAAGCACATTCTTAATGCCGTAACC 71831 29 100.0 32 ............................. GGGGCGATCGCCGTGCAGTGGGCACAGAACGT 71770 29 100.0 32 ............................. GCCGCCCACCGGCTCGTCCTCGGTGAAGGACC 71709 29 100.0 32 ............................. GGCAGGCCCATCAAGGCCCCTGGGCCCGGCCA 71648 29 96.6 32 ...T......................... ATGGGTGTCTCTCTTCTCTATCGGGCCCGGGC 71587 29 100.0 32 ............................. TGCTCCACGCGGCCAACCCGCGGAAGGGCGTC 71526 29 100.0 32 ............................. GACACCCGGCCGTTGACGGACGCGCAGGGCAA 71465 29 100.0 32 ............................. ACCTGGCGGGACCGGCTGACCAAGCTGTACCA 71404 29 100.0 32 ............................. GTGCCGCACGATCGAGGAGCACGCGGAAGCGC 71343 29 100.0 32 ............................. ATCCGGGAGCTGCGCACCAAGCGCACCAAGCT 71282 29 100.0 32 ............................. GTCCTCGTACTCCGCAAGGCGGACGGTACCGT 71221 29 96.6 32 .C........................... AGGTCCGCAGGCACCGCGAAGACGTTGGTCGA 71160 29 100.0 32 ............................. GACCCCGAGGAGTCCACTTCCGTTGGCGAGCT 71099 29 96.6 32 .......................A..... CTGCTCTTACCGGCCCTGGTGGTGCTGAACAC 71038 28 82.8 0 .............AC.......CA-.... | ========== ====== ====== ====== ============================= ================================ ================== 20 29 98.6 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TCCGAAGGTGAGATCGCGGCAGAGCTGGCCGAGCTACCGGGCTGGGAGCGTGAAGGGGACGCGATCACCCGCACGTTTGGGATTCGCTACCACGGCGGCGTCGCGATGATCGTGAACGTCGCGGATGCCCAGCGACTCGTTGGCCACCACGCGGACATCGACCTGCGCTGGGACCACGTACGGTTCCGCATCACGACACACGACGCCGGACACCGCCTCACCACCGCCGACTTCGACCTGGCCGCCCGGATCGACCGCATCGCGGCGGCACACGAAGCGCAACCGCACAACTCTTGATCAGGGCACCCGCGTTGTACCCGCAGTGTTCGGTGAATGGCCTTTCGGCGGTGAAGATGAGGCACTCTGAGCTTGCGGCCGGGGGAGGAGCCCCGTCCGCTGCGTTCAGCCTTGGGCCACGTACGGCAAGAGGAGATATGTCCGCTTCTCTGGAAGTAAGTAAAAACAGCGCCTCAGTCACCTAAACCCGCAGGTCACGAACT # Right flank : CGCCTTGACCGTCTCTCGGGTCTCAAGCTTCGGGTTTCGAGGACGGTTCGTTCACTCTTTCTCGTGTACGGGTACGGGGCCCGGGCCGAAGCTTGGGCTCCGAGACCCGGGCGTCGGGACACGAGGCCCGGGATTCGAGCGCCTTCTTTAACCGGTAGGTAAGGGAGGGGGTTTGGGAAAACCTCCCGCCCTCCTCACCCAGGTCACAGCTGGGGAAGTATGACTAATGGTGACGGCTTGCGGCGGAGTGTCACGAGTGCTTACGGTTCGAGAACTGAACGACCCCGACAGGTGTTGGAAGCACCAGGCCGGGGTCTGACCGCAAGATCGAACACCCTAGAAAGACGATCCATTGGCTACCCAGTACATTAGCTCCGCCCTGCAACCTCCCGCACTTTCCGACGCGTACCCCATGGCGAATCCGGGCTACGGAAAGCGCTCAGCTCCGGACCAACTGCCCCGCAGCGCAAGGGATTTCGCCTTACTACCGGCGCGTGAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 76779-76567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOA010000016.1 Streptomyces sp. CAI-155 NODE_16_length_187217_cov_429.741, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 76778 29 100.0 32 ............................. TTCCGATTCCTGCTGCGCATTCCGGTGGAATT 76717 29 100.0 32 ............................. CACCAGCACAGGGCCGAGCGCCTCCGCGACAG 76656 29 100.0 32 ............................. TGGGTCTCGGTGACGATCTGCGTGGCTTCGCG 76595 29 82.8 0 .....................A.AGC..A | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CACCCCGAGCCTTTCCTCGACCACTACCAACTCCTGCTCCCCAGCGGGTGCTTCACCGAGCCACTGCTCCAGCCGCCCTTCCTCCTCCAGCAGATCCCACTGGTCCTCGTCCAGCAGGTCGGCCAGTTCCCGGTCGGAAGCCTCCTCTTTCATGTACCGCTCGTCGTACTGCTCCAGAAAGCGACGCCACTCCTCGGGCGTGGTCAGGACGTCAGTAACTTCACTGTCTTCAGGCTTGGTTGTCTCATCCATGCGACTCATGCTCGCAGGCGCCTATGACAACGCCCCTACCTCCAGGGCGGCGGACCGGAGGCAGGAGCCGCACCGACTGGGCGTGGCTGGCGCTCCTGTGCCACGCGCAGCACCGAGGAAGGGCAGAATCACTCCTGGGGTATTCGGCTCAAGCAGGGGCCCTTTCCCGAGACCGGAGGGATATGTCCGTTTCTCAAGAAGTAAGCAAAAACAGCCCCTCAGCCACATAAACCCGCAGGTCACGAACT # Right flank : GAAGCTCACAAGGCCCACAGGACCCGCCGTACCCGAATGAAGCCATCGGGCGTCGGCTGACGGCCTGCCATGCCTCCGTGCCGCCCACGACCCGAGCACCGAGCACCGAGCACCGAGCACACGTAACGCCGTCCTCCTCCGACTCGTTGTCGCGAGAGGCGAGAGACATGGGTGGTCGACGCCCGCGGAGCCCAGGAGGCTTGGGAATCATGATCGAAGAGGGCGGCCCCGGGGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGGTTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGCCAAGCAGGCCCCGTCGCCCGGACGAAGGCCGGACCGGCGGTCGCCTTCCAGGTCAACGACCCGTCGCTGCTCAGAAAAGTCGGCTGCGGGGAGGACACCTTCCAGGCCTGGAGCGCGGACCCGTGCCTCCGGGACTTCACGGGGAACGGTTTCGCCGGATCCGAGGGGCAGGCC # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //