Array 1 59722-57062 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKS01000012.1 Bacteroides salyersiae strain BIOML-A32 scaffold12_size187057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 59721 35 100.0 34 ................................... ATTGTTGATCATTTGAGTGAGGAATTGTCTGCAT 59652 35 100.0 40 ................................... GCTTTAATTGGTGCATTTGTCGGCGTTTGCTGCAATGTAT 59577 35 100.0 38 ................................... GCAATAGTAAGTGTTTTTGTCTTCTGTGCTCTCTTTCT 59504 35 100.0 34 ................................... AAGTATATCTTTGCCCGGGCTCGTGAAAGCTTTG 59435 35 100.0 39 ................................... AAAACTTTATACAAAGTGGGAAAGTGTAGGATGTATAGA 59361 35 100.0 35 ................................... ACAAAACGTTCAAAATTCTAAATAACGACCACCAT 59291 35 100.0 45 ................................... CTAAAGCAGAAATGCTGATAAAGGGAAATACCCAGCTGTCAAAGA 59211 35 100.0 34 ................................... CTTATCATCGTTGGCGTTTGCTCTATGCAGGCCC 59142 35 100.0 36 ................................... AGTGTTACTGCCTTTCAGCCGGTATGCCTATTGGTA 59071 35 100.0 36 ................................... AAATATGGCGCTGTCATCGGCTTGGAGAAACGCTTC 59000 35 100.0 36 ................................... ATAACTGGAGCACCAGAAGAAGGCATTGACCAAACA 58929 35 100.0 36 ................................... CTTCTATGGCGACCCCAAGTACAACGGTACCAAGGT 58858 35 100.0 37 ................................... AATACCTCGCGAAGGTAGCTCTGTTCATCCATGAGGA 58786 35 100.0 34 ................................... TATGAGCATTTTGCCACGCCGCAAAGGTATAAAA 58717 35 100.0 33 ................................... ACTGTTCTCATGATTATAGCGATGCCTTTGCAT 58649 35 100.0 33 ................................... CATCAAAGAAAACATATTGCATCTATCAAAGGA 58581 35 100.0 37 ................................... CTCAAGAGTATAAAGCTCGTGAGGTTCACTCCAGCGA 58509 35 100.0 32 ................................... GAAAGACAATGCCAAACTTGCTATATTTGCAA 58442 35 100.0 34 ................................... ATTGTGGTTACATTCCTGCGATGATGAATTTGGG 58373 35 100.0 36 ................................... CCAGCCGTAGCGCCTTTATTTGAAATTGCCGAACCC 58302 35 100.0 35 ................................... GTTTGTACCTTGGTGCCGAAGGCGGTTACGCATTC 58232 35 100.0 36 ................................... TTTTCTCCTGGGCATGGGAAACAGCCGGCAAATACT 58161 35 100.0 37 ................................... GGTTTCTGGGGTGGCTATGCCAACCAGGATGAAGTCT 58089 35 100.0 33 ................................... TCATGAAGAGGCATTTGAAATTCCTTTTGTAGG 58021 35 100.0 38 ................................... TTTTTCAGCGGAAATAACCGAAGCATTAGCAGCCGGAA 57948 35 100.0 36 ................................... AGTAAAGTGGGAAGAAGTTGTAAAAGCTCGTATGGG 57877 35 100.0 38 ................................... TTGAGGGTTGCTGCTGGTCCTCTATCGAGTATAATAGT 57804 35 100.0 37 ................................... AAAAGTATGAAGACAATGAGAAATTTCGCAGCTGCGA 57732 35 100.0 35 ................................... ACAGTAGCCATCAACATAGATCACTTAGTAAGTGT 57662 35 100.0 33 ................................... GATTATAGGCTCTGTCAATGAGGATCCATCACT 57594 35 100.0 35 ................................... AACAGCGTTCGAAATATTGCGCCTTTCCACACTGT 57524 35 100.0 37 ................................... AAATCTCTTGAAAGAATACATTGACATATGTCTAAGA 57452 35 100.0 35 ................................... TAGACAGTGTATAACAAAATCAATATATCATGAAA 57382 35 100.0 35 ................................... ATACATTCGAAAACTTTATATAAAATGGGAGAGTG 57312 35 100.0 37 ................................... TATATTTATAACCGCTGCAGAAGCATTTGCCAAACGA 57240 35 100.0 36 ................................... TCACCTATTATGATGTTTGCTTTCGTGGCTTAAATT 57169 35 100.0 38 ................................... TTATTTATTATTTGTATGGTAATTTCTGCTTTTGCCAA 57096 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 38 35 100.0 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : GTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTTGTCTTAATATTCTACTGGAAGTAACTCAAATACGGGATCTGGGTTGTGACATGGCGTAACGGAGAAAA # Right flank : ACTCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATAGGCTTATCTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGCAAATGATTTTGATTTTCTTTAAAAAAAATCATTTTCGAAAAACAGCATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCACTTGTATAGTAATGATTCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCTACATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 140807-141155 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKS01000009.1 Bacteroides salyersiae strain BIOML-A32 scaffold9_size194350, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =================================== ================== 140807 42 100.0 34 .......................................... CAACCATTGACGGTGTGGATGGTTTACCTGAGGA 140883 42 100.0 35 .......................................... CAACGATATATAAGCATTTTGGCGTTAAACTTCCA 140960 42 95.2 35 .............................A..G......... TAGCAAAATCACATCATCAATTTCTTCTTCCAAAG 141037 42 81.0 35 T....CT.G..A...A....A...........G......... CAACAAATACTTTTTCGATATTATGATCGGCAAAG 141114 42 83.3 0 ......TCG....C................A....T....T. | ========== ====== ====== ====== ========================================== =================================== ================== 5 42 91.9 35 CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Left flank : ACTGGCCCAGCAGAATACATCCTTTTCTCCTTGTATGTTGGGACCCGCACCTTTGGTATAATCCCAAACTTCAAGTACCAGATCAAAGAAAGGTTGTGGGGGCGTGTCCTGTGCCTTACAGAAAGAAGAGATAAGTAACGCTGTCATTAGTAGTAAATAATTTTTCTTCATACCATGTGTTTTTTAAGTTTATGATCTTTAATTTTTTTTGGAGCAATACAGATCGGGACTTCGTCTTTAAAGAGATGCTTTCTCTATATTACTTTATTATAAAGCGGATGAGAAGAAAAAAACCACTAATCTTTTTCCAATAATAATTTAGTTTGGGATTTAATTTAGCAAAAAAAGTACAAGATATTGATGCTCTTGGTAGTAATTAGAACTCTTTTTAAATTAAAAATCCCATTAACTAATGGGATTTTCTTGAAGAAACAGCATTTATTTTTATTTTCTAAATTTTATTGTAATCTTTTGAATTACAGTTTGTTGTTGGCATTGTA # Right flank : ACAACTAAAAAATGGTGGTTATTAAAATAATATTTGTAATTTTGTAGTCCTAACCCTGTGGGGGAGTGAGACTTTAGCGGGTTATGTGATATTTGTATCGTTTAGCCGCTAATTTGTTTTCATACTTTTCCTAAAGCAAACTGCTGTCGTTGCTGAGGATAATCACGATTGTGTAGAGAGAGAATTCTAACTTAGTGCAAATGGAATTTGATATGAACTCAATGAAACATATTTGATTGATATATTGGTAAATAACCATTGTTAAAAAAAAGTGTTCATTAATGAATTGGGGCGTAAATTATAACATTTTACATCTTACTTATCTATCTTCCTTTTTTAACATTGTTAATTGCATTTCTCATATATACTTTCCTGCTTAACAAGAAGCGTATTTCTTGTATATAAAGAACGTATCCTTTGTCGACAAGAAATACGATTTAACGCAGCGTTAACATGGCTTTCTTTCGTGTATAAACAACGGCTCTTTGATCTCAGGAAAT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 28209-26738 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKS01000011.1 Bacteroides salyersiae strain BIOML-A32 scaffold11_size187409, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 28208 30 100.0 35 .............................. ATTGGGAGAAAGATTTTTTAACCACTGCCGTTCAG 28143 30 100.0 35 .............................. TGTTTAATATTTATATGTTATGAAAGAAAAAAAAA 28078 30 100.0 35 .............................. AAGCTAATCAAGCCGTGGGATCGCAACACGGGAGA 28013 30 100.0 35 .............................. AGTGGAGGATCACCACAAGCGATAAAATCACAAAT 27948 30 100.0 37 .............................. ACAAAATCGCGGTAATCCTTCCACAAGGCACGCAAAG 27881 30 100.0 37 .............................. GAGTAGACACACAACTCGCACAATCATTGATCGACCT 27814 30 100.0 34 .............................. TGGAAGTCAATCAAAAAGCGATCAGCGCAAAAAG 27750 30 100.0 34 .............................. AATATGAACGCAGGCTTCAAAAACAAAGAAGGGG 27686 30 100.0 35 .............................. TGGCTGCTTGTGCAATGTCCCATCTGTCTGTTCGG 27621 30 100.0 37 .............................. AACTCCACTTAAAGAGAGGAATTCATAAACAACTAAT 27554 30 100.0 34 .............................. ATCGTTGGATGTGTTAGTACGTTTGGTTGTAAGT 27490 30 100.0 34 .............................. AACCTTCTATTTCGTACTGTCTTGACAAGATCAT 27426 30 100.0 38 .............................. TGTTATATTTGCAAAGTAATCAAATCTATTATTCACTT 27358 30 100.0 35 .............................. TTAACAGAGTACTACGAATTCAATGGATACACTCC 27293 30 100.0 36 .............................. GTGGTAATCTTGCAGGTGCTTCCCCCCAATTGAATG 27227 30 100.0 36 .............................. ACTTTTGAAGTCAAGGTATTGCGGTTTGTGTACGAT 27161 30 100.0 34 .............................. GATTGGCGCGGTCGCTTTCGATGATTTGGCCATG 27097 30 100.0 38 .............................. TGTCAGAAGCATCAACCGTTCCATCACCTGTAATCTTG 27029 30 100.0 37 .............................. CTGTTTCTTACGCTTACCTATAATAATGAACATCTCC 26962 30 100.0 34 .............................. TGAAGATGATCCTGTGCGGTACGATTGTCTCCGG 26898 30 100.0 36 .............................. AATTGACCTAAGGTTATAAATATACCTAGTAATGTA 26832 30 96.7 35 .................A............ TAATAATTGGCAGCAGTACCCATTGCACAGGCATC 26767 30 86.7 0 ............T....A..A.......T. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.3 36 GTATTAATTGTACCGTTGTGGAATTGAAAC # Left flank : CCTTTAAAATGTATTGGTAAAATATGTATGTCATTTTGGTTTATGATTTTGGCGAAAGACGAGTTGCAAAGATGCTGAAGCTATGTCGTAAGTATTTGAATTGGATACAAAATTCCGTATTTGAGGGGGAAATATCAGAAGTACGATTAAAGGAAATGTTATCTGCTGCAAAGGCTTTCATGAAGGAAGATGAAGATAGTATTATTGTTTTTAAAGGTTCCTCACAATGTTCTTTGGAGAAGAAAATTATCGGGAAAGAACGGTGTAGTATCGACAATTTTTTATAATTTAGTTGTCGATAATTGTTTTTATTGTCTTTGCAATAAGGCTCTACGTTGTAGATCGTTCTTTGACGTGTTGATATACAGTGAAATAGCTGCTATGTCGATGTCCGGCATTTTTTATGTTATTATCCATCGACATAATTAATCATATAAAAAGCATATTTGTTATTTGCTAACTCACTCATTTTTAATTGTTTTTTTTGAGTGTTTGTTAGA # Right flank : ATGTGAACCGTAATTTTGTTGGAACAGAGTGTTGTATGTTAATAGCACTACCATGAAATGAGATTTTATAGATTACTAAATGAAAGGGTGATCTACGTCACATTGTGAGCGCTTTAAATACCGGTTCTGCCTTTTGTATTTCTGATTCAAATCCAAACCAGTATCCTGCTTGTCCTTCTTGATTGGCGGGCAGGAAACATAAGCGTAATGTCTCTTTGTACTTGCCATAAATGGTTATCCACGTTTCGGGAGGGATTTGTCGTTTCGTTTTTACTTTTTCTGCCGGAAGTTTCTTTAGTGACATGCCCGCTTCTATCCAAGCAATGCTGACCTGTGTCTGATAGGCCGGATAATTTTGCTTACAGAATTCATACAAAATCAATCCTCTTTTTTCCAAGCTCAGTGGTTGGTCTATCAAGCCGATTTGCATAAGGTGATCCAGAAAATGATGCAAGAAATGTTCGTTTTCCAACATCAGTGTCCGAGTGATGTTTTGCCAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 42151-41925 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKS01000011.1 Bacteroides salyersiae strain BIOML-A32 scaffold11_size187409, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 42150 30 100.0 35 .............................. TACAGCAGCGCTGGGTTTAGTCCTGCTGCTTCAAG 42085 30 100.0 35 .............................. AGGAAAAATTCACAAGACACAGAGCCTACAAACTC 42020 30 100.0 36 .............................. GTTGATCCGCTATTGTTTTTAGATATAGTCATACTC 41954 30 73.3 0 .T...............A......AATTTG | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 93.3 36 GGCTTAATTGTACCGTTGTGGAATTGAAAC # Left flank : GTGAAGCAGAAGTAAAAGAAGGGAAACGTCATGGACGTTATCGCGAATATTATGAAAATGGAAAACTGAAACTTCGCGGGAAATATGCCAATAACTTACCTAAAGGTACATGGAAGTATTATACGGACGAGGGAGAGTTTGAACGCAAAGAGAAATATTAATTGTTATATTGGGTTTTGATATAGTTTTATTAAATAGAAAGCCTCTGATTGATCAGATGAAAATGTATGCTTATGTATTACTTATTTTTTTCTTAAGAAATAAAATTATGTCAGAATTTTATTTGTAATTTAGTTGTCGATAATCGTTTGTATAGTCTGATTAATCTGGATTGATATATAAATTTTTCTTTGAAATGTTGATATACAGTGAAATAGCTATTGTGTCGATGTTCCATGCTTTTTATACGATTAGCCATCGACATAATTGATGTTATAAAATGGTGTTTTTATTGGATAACTTGCTTATTATTAGATATCTTTTTTGAATATTTAATGTGG # Right flank : AGATTATCCTTATGTGTAATCTTTTGCTATCTATGTTACTACTTTTTTATTTGTTAAAAAATACAAGAAGAAAACGCGCAATTATATTCTTTTATATCATTTAACATCAGATAATTAACCTAATTTCTATTTTTGAGACCCCAATTCGACAATTCATATTTAATTATTAACCTATATATTTTATATGACTATGCGAACTAATTATTTATTATTTTTAGTAATCATGTTGGGAATATTTCCCTTGAGTCACACACAAGCATCCGATTCTATTTCAAACAATGTAGTACTTTATTCTCCTTACACGAAAATCTCAGTATCGCCCGGAGAAAGTATTAACTACAGTATCGATTTAATAAATAATGGTAGTGAGATTTATAATGAGAATATCTCATTGAGTGGATTGCCGTCCAGTTGGAAATACGATATAAAATCCGGTAGTTGGAATATCAAACAATTAGCTGTACTGCCCAATGAAAAAAAGAATTTCAGTTTAACGGTGA # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //