Array 1 33205-36635 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHPZK010000012.1 Paludisphaera sp. JC747 12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 33205 32 100.0 34 ................................ ATCACCCACGAGTACTTCGTCGACGAGATCGAGA 33271 32 100.0 33 ................................ TGCAACCGGGGTTCGAGCTGCGAGAGGCGGCGG 33336 32 100.0 34 ................................ CTCCGGGGGACGGGGAGGCGAGGGATGAAGTTCA 33402 32 100.0 32 ................................ TTTGCACAGATCGAGTATGGGGTGGGGCTCAA 33466 32 100.0 35 ................................ GTGAAGAGGAGTGCTAGGGCGCAGCGAGCCTTCAC 33533 32 100.0 33 ................................ TCACGCAGCTCCTTGGCCGTGATGTGGCCGACG 33598 32 100.0 35 ................................ CAGGCTCCTGAGTTGTAGAACCGCTTGGAATCTTG 33665 32 100.0 35 ................................ CTCGAAGGTCGCTGCGAGCACACCCGCAAGGCGTA 33732 32 100.0 35 ................................ TTACGTACGCCAACCCTGCCTTTCATCACGTCTCG 33799 32 100.0 36 ................................ AAACTGACCGAGGCCAAGGCCCTGGGCGTCCCCCAG 33867 32 100.0 35 ................................ TCGCCGTGCGAGTGGCGAAGCCTGGACGGCCTGGT 33934 32 100.0 36 ................................ CCAGCCAAATCCAAGGTCGTCTCAGCCTCCCAGCGG 34002 32 100.0 34 ................................ GCTGACGGCACGTCCTTTAGGATCGCCAGTGCTG 34068 32 100.0 34 ................................ ACCATGCGGAGGTCGATCGCCCGAATCCGCTTCA 34134 32 100.0 33 ................................ TTAGTACGGGTGTCCTAAAGCATGGCGAGTTGA 34199 32 100.0 33 ................................ CTCGACAACTGAGACAGATCCGACTCCGCCGAC 34264 32 100.0 33 ................................ GTCTGATGCCCTATATGCCACCCCCGGCACAAT 34329 32 100.0 33 ................................ CTCGCCACCGGCCGCACCGGGAGCACGCTGACC 34394 32 100.0 35 ................................ ATGGCTTCGCAAAGCGCGAAGTAATAGCCCTCCAT 34461 32 100.0 35 ................................ GCGATGTCCCCAAGGGCTTCGTCGCCGATGGAGCC 34528 32 100.0 36 ................................ CAGTGAGCATGCTGTGTGATGTCAGACGGTCAGAGC 34596 32 100.0 33 ................................ TCATGCACGCGGACAACCTGAAGCTCATGCCGA 34661 32 100.0 36 ................................ CTCAAGCAGTCCTTGATTGTGCCGGCGGCGGCCCTG 34729 32 100.0 35 ................................ GAGATGGTACAACAAACACTCCCTGGAGGCGAAGC 34796 32 100.0 36 ................................ CACCGGGCTTACACCGGCGATGGCTACGTTCACGAC 34864 32 100.0 35 ................................ TACGGCCGAGCGGCGAGCGTCACTGAATGGCTGCT 34931 32 100.0 33 ................................ CATCGGAGGCAGTCTCACGCTGGCCCCGGGGAC 34996 32 100.0 34 ................................ CTATGGTGGATATGGTGCATGGCATGGAAAACGA 35062 32 100.0 34 ................................ CTTGGTCAACCCGTTGAGCCACAGCCAGAGTCGA 35128 32 100.0 35 ................................ CGTGGATTCCGAAGGCGTCTGCCCCGTGGCGATTC 35195 32 100.0 35 ................................ GTTTGGTTTCCTCGCCAACGGGCCGCTCCCACATG 35262 32 100.0 35 ................................ GTGTTGTCCGAGCCGTTGACGGCCCCGCTGGTGGA 35329 32 100.0 33 ................................ TCACGTCTGGGGCCAGTCGTCCATGACAACCGC 35394 32 100.0 36 ................................ ACGAACGTCGCGGCCGACTGTCGCAAATACGCCGAG 35462 32 100.0 34 ................................ GACTCGTTCGACGGACTTGATGGGGTTTGTGACT 35528 32 100.0 35 ................................ CGCAATGGCTTTCGCGATCTTCCTGGCGTCGGCTT 35595 32 100.0 35 ................................ GGCTTCCCCACGGTGGCCGTCGACACCCACGCCGG 35662 32 100.0 37 ................................ CCAACGGTCGACTTCTCAAGCGACACCCCCCTTCGTC 35731 32 100.0 35 ................................ GCTCTGGGCTCGCGGGCGAGGCGGAGCCCCTCCGC 35798 32 100.0 35 ................................ CGTATCCCGGTTCACCGAGGACGCGAGGGTAACAA 35865 32 100.0 36 ................................ GTCTCGGCCTCGATCGACTCGACCGGCGCGACGGGC 35933 32 100.0 34 ................................ CGCTCCACCCTGGCGACTCACCGGACCTTATCTG 35999 32 100.0 35 ................................ CATCCAGTACCAGCCTGGTTCAGTCGGAAGCCCTT 36066 32 100.0 35 ................................ CAGTATGGACCCAACCCCGACTCCAACAACGGCCA 36133 32 100.0 34 ................................ TCGCTGCGTGGCGGGGAGACAACGCGGATGACGG 36199 32 100.0 35 ................................ TTTGACGAGGGGCGGGACTACGTAGAAATGCCCTT 36266 32 100.0 36 ................................ GCAGTTGGTGCAGTTGATCCCATCGGGCCAACTGAC 36334 32 100.0 36 ................................ TGCCTCCCGAACGTCAGCGTCAGTCCGGCTACCTAT 36402 32 100.0 34 ................................ GAGCCGCCGACCTGCTGCCGGTTCAACTCGCGGA 36468 32 100.0 35 ................................ GCTCGGAGCCGATGAACACGGCCTGGCCATAAGGG 36535 32 100.0 37 ................................ GGCGAACGATTCCGCTCCCCATTCGGCGGGAGATGTC 36604 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 52 32 100.0 35 GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Left flank : CGGGACGGCCTTGCCTCAAGTCGGAGCCCTTCATGTACGTCCTCGTGACTTACGACGTTCAGACGACCTCGCCCGACGGCAAGCGACGACTGCGACGCCTGGCCCGAGCCTGCCTCGACTACGGCCAACGCGTACAGCTCTCCGTGTTCGAGCTCAAGCTCGACCCCGCCCTTTGGGCCAGTTGCCGCGAACGCCTCCTCTCCATCATCGACCCCGAGCATGACAGTCTTCGGGTCTATCATCTGGGCTCCCGCTGGGAAGGCCTGGTCGAGCACCACGGAGCCAAGCCCGGCTTCGATCTCGAAGGGCCCCTGATTCTCTGACGCGGACGCCAAGCGCGCACCAAATCCCGGGACGGTTCGCGGCCCTCGTAAACCTCTTTGGCAATACGGCTTGCAGAGTTTGCATGACCCTTTCGTAAGGCTTGAGAGTCGCCTTAGGTGCTGGTTCGCGAAATCCAGCACTTAAGGAGCAAGCTCAAGAGCACTTAGAATAGCGGA # Right flank : CCGCTCGTGGGGGCGATCGCGTCGAAGCGGCCGGAGTGTCGCCCCCATCGAGTGGCGGGAGCAATCGGCGGGTCGCCGATCCGCCTGGTTCCTCCTCACGCGACACGTCGGAGTAGGACCGCAGCTTCGGAAGTCGAACTCGGCCCGGACCTCGCAGGGCGGCCGCAAGATCCGCGCGGGGGCCAACGGGCCGATTCGTGGGAGAGCCTGACGCTCCGCTCACACCGCCCCAGCCCGAACCGAGGAAGGCCTTCTGACAGCCAGACGAAGGCGATCGGAGAATCGAACGCCGTGATCCATCAGGCGACGCGGAACCGCGGCCCTCCTCTGGGGCCGGCCCACGGCTAAAGAGAAGTGCAGTCGCCCCCGCCGCGACCAGAAGTCGCGGCGGGGGCGGTCTTGGAGATCAGCGTCTGCTGGGTCTCGGACGGATGTTGCCGGCGACGACGCTGCAGGCAACGAAGCCCGCCATCGCCAGGATGAAAACGAGCCAGCTGCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCATGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //