Array 1 315079-315376 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QKML01000002.1 Rhizobium sp. UGM030330-04 N434DRAFT_scaffold00002.2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=================================	==================================	==================
    315079	    33	  97.0	    34	A................................	CCCGCACGGTCACGGCTGACAAGCTTGTGGCGCT	
    315146	    33	 100.0	    34	.................................	TACAAAATCGGCTGGCCCCTTCCGGATGATCCAA	
    315213	    33	  93.9	    33	T.........C......................	TTGAACTGCACCACGATGATCTTTTCGGCATAT 	
    315279	    33	  84.8	    32	........TA.....A.G......A........	CGCCTGGGCGTCGTCAACAACATCATCCAGAT  	
    315344	    33	  72.7	     0	.C.G.....TC....A.....C.A.G..T....	|                                 	
==========	======	======	======	=================================	==================================	==================
         5	    33	  89.7	    34	GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC	                                  	       

# Left flank :   CCCCTACAAGCAGGCCTATGAGCGCGGCGTGAAGCTGATCGGCGCAACGGCGCACTATGTCACCGCCGATCTCGACGAAGGCCCGATCATCGAACAGGACACGGTGCGCATCACCCACGCCCAGAGCGCCGACGACTATGTCTCGCTCGGCCGTGACGTGGAAAGCCAGGTGCTGGCCCGCGCCATCCACGCCCACATCCACCACCGCACCTTCATCAACGGCAACCGCACCGTGGTCTTCCCGCCAAGCCCTGGAAGTTATGCTTCGGAACGGATGGGATAAGCCCCGAGACCAGCCAGAGAGCCCGTGATCAGGGATTTGGCGCGAACCACAAGCGTGCTATGGTTCCCCGGCCGGTTCGCACCGGCCGCCGCTCTTTGAAATCGCAGCGATTTTTTGTAATCAGGACCTGCCAGCCCCGCAGGCTCTTCCCTCGCGCGTCGCCGTTCGCGCAATCCGCATTTTTTCCGCAGTCAATTCCGGGGCTTCAGACTCCGGC
# Right flank :  CAGGGCATAGGTCAATTGATGGGCCGCCTGAATATGTCGCCCCCGGGGCGAGGATTGAAACGCCGCAGCACCCGCCAAACAGGAAGGCACAAAGCCCCTCACCTCATCCCACCAAACACCACCCGTGCCCTCAACCCGCGCCCGCCCGCACCATCCTCCAGCGTCAGCCGCCCGCCGAACAGCCCGGCGATCTCCTCGATGATCGCAAGGCCGAGGCCGGCGCCGGGGGCGGCGTTGGCTTCGCCTCGGGCGAAGCGCTGGCGCACCATGGCGCGTTTTTCCGGTGGGATGCCGGGGCCGTTATCTTCCACTTCCAGCCAGACCGTGCCCGTCTCCCCGCCGACGCGCACGGTGACTTCCGCGCCGCGCCCGGCATAGTTGATGGCGTTGGAAACGAGATTGCCGATCAGTTCGCCGATCAGGAGCGGTTCGGCAAGAATGGTCGCCTCACCCTCGCCTTCGAAACCAAGATCAATGCCGGCGTCGGCCGCACGCGGCAC

# Questionable array : NO	 Score: 6.56
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.49, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGTCGCCTCCTTCGCGGAGGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.10,-5.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-14] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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