Array 1 743647-746058 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023477.1 Streptococcus mutans strain LAR01 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 743647 36 100.0 30 .................................... TAGAATTTTTGCAATATCTAGATGTTCTTT 743713 36 100.0 30 .................................... TGACTGATGGAAATCCACACGATAAATAAT 743779 36 100.0 30 .................................... TGACGTAATCAATCTTGTTAGGTCACGTGT 743845 36 100.0 30 .................................... CAAATACTTCAGCTTAATTGTGTTTCCTGC 743911 36 100.0 30 .................................... TGATAATATATTGGCGCATGATTGTTTCTT 743977 36 100.0 30 .................................... CCTATATGGTCAATATTTCCAAGTATCGAC 744043 36 100.0 30 .................................... GCATTGACCGTTTTTACGATTAATCTTAAA 744109 36 100.0 30 .................................... ATTTAAAACAGATTGGGAACATATGCATTA 744175 36 100.0 30 .................................... TAGTTTAACAGATAACACTAAGCGTTATCT 744241 36 100.0 30 .................................... TGTTGCTTATGCGGATGATGCGCAAGGCGC 744307 36 100.0 30 .................................... GAATGGTGAAACAAAAGCTGAAGTAATCGC 744373 36 100.0 30 .................................... AATCACACCAAGAGCGCTTACTGCACTAGC 744439 36 100.0 31 .................................... ATACGGCAATTATCGCTGGAGTTGTAGCTGT 744506 36 100.0 30 .................................... AGTCGTCGTTCTGCGTTTGCGACGCGGTTT 744572 36 100.0 30 .................................... CAACTCAGACGCTAATATGAGTGCAAATTT 744638 36 100.0 30 .................................... AGATGAAATGTATAACCGCATTTTTCTTAG 744704 36 100.0 30 .................................... AATTCTTGACGTCAATTGCTAATCCGTATA 744770 36 100.0 30 .................................... AATTTCGTTTGCAGATGGCACTTCTGTGCT 744836 36 100.0 30 .................................... CTTCCTGCTAATGCTTATCAGTTGTTTCAC 744902 36 100.0 30 .................................... AAAAGCAATTGACTTTGCCAATTCTGATTG 744968 36 100.0 30 .................................... TAGAAATGACTTGACTTTTTGTTCACGCTT 745034 36 100.0 30 .................................... TGATAATATATTGGCGCATGATTGTTTCTT 745100 36 100.0 30 .................................... CCTATATGGTCAATATTTCCAAGTATCGAC 745166 36 100.0 30 .................................... GCATTGACCGTTTTTACGATTAATCTTAAA 745232 36 100.0 30 .................................... ATTTAAAACAGATTGGGAACATATGCATTA 745298 36 100.0 30 .................................... ATAAGGCTAAAGACGCAGGGGCTGACCCGT 745364 36 100.0 30 .................................... ATTAAAATTATATTAGAAAGTCTGATAATA 745430 36 100.0 30 .................................... GCTATATGATTATGGCGTTAATACAAGATT 745496 36 100.0 30 .................................... TGGTACTCAGTGGTCGCAAATGCTTGCTAA 745562 36 100.0 30 .................................... ATTCTGTTCCACGTTGCTTCAAAGTCTTTC 745628 36 100.0 30 .................................... GCAATCGTGCGCTAGAATATTGTCTGGTCG 745694 36 100.0 29 .................................... CTTAGCTGGAAGCTTTAGCACTATCATCA 745759 36 100.0 30 .................................... CTCTGCACTTTGAACCAGAACGGCAATATC 745825 36 100.0 30 .................................... CATTTGCTGGAGCGCTAGGATTAGTTCTTT 745891 36 100.0 30 .................................... AAGGTATTATACGGATTGACAGGTAATACT 745957 36 97.2 30 ...................................T CGGCATATATAATCCGTAAAGGCGGCACAT 746023 35 75.0 0 ..........CA.......A.TG..-T.A.T..... | A [746039] ========== ====== ====== ====== ==================================== =============================== ================== 37 36 99.2 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAGGCTTTGGAAAAGAAACTACAATTATAAAACAATAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTGAGGTATAATATAAGCAATCAAAACCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : CGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //