Array 1 277318-278739 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUWI01000012.1 Streptococcus agalactiae SGBS030 ctg7180000000924, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277318 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 277384 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 277450 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 277516 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 277582 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 277648 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 277714 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 277780 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 277846 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 277912 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 277978 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 278044 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 278110 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 278176 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 278242 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 278308 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 278374 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 278440 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 278506 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 278572 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 278638 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 278704 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //