Array 1 8211-9040 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMLC01000059.1 Actinomadura sp. 6K520 NODE_59_length_40379_cov_63.5231, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 8211 30 100.0 40 .............................. GTGGCCTGGCGGCGCATGTCCAGCGGGAGGCCGACCCGTC 8281 30 100.0 41 .............................. AGGTGCAGCGCCTGCCCTCGGTGCATGGGGGCGCCGCACCG 8352 30 100.0 36 .............................. GAGAACCGTCCGGTGCCGGCCGCGGCGAGGCGCTGG 8418 30 100.0 34 .............................. GCGGAGCCGCTGCTGACGTGGCGGCCGTCACGGA 8482 30 100.0 38 .............................. GAGGGGCCCGGCGCCACGGTCCACGCCAATGAGGACGG 8550 30 96.7 35 C............................. CCGGCGGCCTGCCGCTTCTGCACCTCGGCGTACGC 8615 30 100.0 34 .............................. ATGACGATGGGGTGCGGGGCGGTCATGCTGCGGA 8679 30 100.0 33 .............................. TGCTGGGTGCGCTCGAAGATGCAGCGCGCGGCC 8742 30 100.0 40 .............................. ATGATGTTGTCGGCCGCGGTGAGGTTGGTGATGTTGCCCG 8812 30 96.7 37 .........................A.... GAGTGCTGGGTGGCGAGGAGGAGCTCGCTCGGCGCGC 8879 30 93.3 35 .............T.C.............. ACGGCTCGGATCAGCTCTGCTGCCGAGCCGGTGAG 8944 30 96.7 37 .....................A........ CCGGGGTAGCCGAGCACCTGCGGCAGGAACGTCCCGA 9011 30 90.0 0 .G.......A...................G | ========== ====== ====== ====== ============================== ========================================= ================== 13 30 98.0 37 GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Left flank : CAATCCCGCAGCACCCGCCCGTACGTCACCCACGACCGAGGCGACGCGCAGCCGCTGGCCGGCAACTCCCGCAACCACCGATTCACCGCCGTAACCGGGCGGGGCACGCCGCCATCATCGAACCGAAGGTCTTCATCGACCAGCACCGGCATCCCCTCCGGAACCACAGGCCGGTGCGCGACATCCCACGACTCCCAACCGCGAGACGAGAACAAGGTCATCAACATGAACAGTGACCGTAGCCGCAACACGCAGCGGCTCCGTCACCAAACGTGACGCTCGATTCTTCACCTTCGGGGAAACGAGACACCGCAGGTAAGCGGAAAGAACCTCGCGTCCTGACCGAGGCCCTGTAGCGTCTCGATCCTCGGAGGTCGAGCGAAGTTGATCAAGATCGTTTCAGCGACACGCCGGGGTCGACAGCACAACCGGAGGATCGCTGCAAATTCCACACCAGGCAAGCTGTTCTTCTCTCTGCCCACCTGGCGCTTTACCGTGGG # Right flank : GATCGGTCCCGGACCCTGACGAAGGTGCGGAAGAACCAGGGCAGGTGCCTTGGCAGGTGAACAGGCAGTTCTCGTCCGGGCCCATCACTACGACGTGACCACTCGCTACCTCTGCGAAGCCTCACCATGTCACCAACCTCACCTGCCGGTGAGTGTTCTTGGCCAATGAGCTGAGGTCACCAGTGACGACAGCCGAAGCCGCCTCCCCCTCGGGCGTCGGCGCTGCGGCGTCCTCGGCCCACGCCACCACGTCGCGCTACTGAGCACTTATCACCATCGCGCGTTTTGCTCATGTGATTGAACTGGGTCGCTCGGGTTTCATTGCGGCTCGTCAGCAGCGAGACCCACTTGGAGGATCCATGAATCGCCTGGTCCGCACCTGTGACCGCAACACCCAGACAACGAAGCGTCGGCCCGACGGACGCTCGGTCGAAGATCTCGGCGGCGATCCGAGGGACTTCTACCGATCCCTCGGCAGTCCATCCCAACTCCGCGAGACG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 12870-14231 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMLC01000071.1 Actinomadura sp. 6K520 NODE_71_length_34958_cov_65.8898, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 12870 30 100.0 36 .............................. AACTCGGTGCGCGACAGGGTCGGGGCGCCGGCGCCG 12936 30 100.0 39 .............................. TTGGCGGCGGCGCGGACGGTGCGGGTGGTCTCAGCGGTC 13005 30 100.0 36 .............................. ACGAGGGGCGGGCCCTCGGCGGCGCGGACCATGGCG 13071 30 100.0 35 .............................. ATGCCGCCGACCGGTCCGGGGTCACGTCCACCGCG 13136 30 100.0 34 .............................. ATGCCGAGGCCGTCGCGGGTGATGCGCTCCTGAA 13200 30 100.0 36 .............................. GCGATGGCCTGCTCTGTGTCGGCGATCGCGCGGTGC 13266 30 100.0 39 .............................. TGCCGGTCGAGCGCGTCGGCTACGGCGTCGACGGCGCCG 13335 30 93.3 38 ....................T...A..... ATGAGGCCCTTGAACTCCGGGCGCCCGGACAGGGGGTG 13403 30 100.0 36 .............................. GGGGAAGAATCCAAAAGGACGCGCTCCCCCTCTTGC 13469 30 100.0 38 .............................. AGGCCGCCGGGACACTGCCCGAGGCGAGGCTCGCCGGC 13537 30 100.0 36 .............................. GTCCGAACCGTGCGTGGCTGCGGTTCCCGGGTGCGG 13603 30 100.0 34 .............................. GCGGAGATGGTGAAGTTCAACGTCCAGTTCCGCA 13667 30 100.0 36 .............................. GTGAGCAGGCATGACGCGCCGCCGGCTGCGGCCCGC 13733 30 100.0 38 .............................. ACTGCCTGTACGGCACGAAGACGCTCGACGCCAACCGG 13801 30 96.7 38 ..T........................... GTCACGCGTTCTCCTTGTTCCCGGCCCGCGGGCGCGGG 13869 30 100.0 35 .............................. TCGGGCCGGCCGCAGCCCCCAGCCTCGTCCCGCTG 13934 30 100.0 38 .............................. GACAGGCGGTAGCGGATGCCGGCGCCGGATCCGGAGAA 14002 30 100.0 38 .............................. CGGACGTTGGCGGGGTGCGGTTCGATCCGGGCGACGGC 14070 30 100.0 36 .............................. TGGACTACGGGGAGCATCAGGACGACCAGTACGGCA 14136 30 96.7 36 ..................G........... GCGCCGTGGGGCGACTTTGAGGGCCGGCCCCCATCC 14202 30 93.3 0 ......................GC...... | ========== ====== ====== ====== ============================== ======================================= ================== 21 30 99.0 37 GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Left flank : AACTTCTCTACCTCGACGCACTCGCGCTGACCCGACGATGCCTGGAAGCCACCCCGTACAAGCCCTCCCGGATCTGGTGGTGAGAACGCACCGTGCACGTCATCGTCGTCTACGACACCGCAGCCGAACGAAATCCCCGCATCCTGCGAACGTGCCGCAAGTACTTCCACCACGTACAGCGCAGCGTCTTCGAGGGCCAGGTCAGCGCAGCCCAACTACGCCGCTTCCAGAAAGAAGTCGAAACCCTCCTGGACCTGAGCTACGACAACGTGATCGTCTACACCTTCCCGCCCGGCACAACCCCCATCCGCCACGCCTGGGGCGCCGCCGAGCCGGCCCCCACCGACTTCCTGTAGCTCTCGGCCCCACTCTGCAAGGCTCAAAGTCGATCAAGAAGTTTCAGCGACACACCGGGCCCATCTACACAACCGGAGGATCGCTGAAGATTCGGGCCGACGTCGCCAATGCAAGCCGTACACCACCTGCGGCTTTACCATGGT # Right flank : CCATGGCTTACGACTCTCGTACTCGTGACGGTCGTCCAGGTGCGACATCACCGTCCGCATCGGCATCGGCCAGGCACGCCTGACCGATGCCGATAGCTTCTGCGCGTTGTCGTCCGCTACGACGTGTTGCCTGACAATCGCATAACCGCCTGCTCCGCTGAGAGCAAGGGGATTGGCTGGCTGGGTAGTGGGCGAGGGCCGGTTTCTTCGATCACGTGCGTGGGGCCGTAGGGCCAGAGGCCGGACATGAGCGCGATGAGGCTGTTGGCTGGCCAGCGCTGGAGGGTCTCGTGGACGACGTCGGCGTCCGGCCCTGGGGTGGCGAACCAGACGACCGCCGGGCTACCGCTGGACGGATCGTTCGTTGCGCGGATCATCGTGGTCATATCGGCCTCATTTTCGAGGTGCTCGATGGCGTCCTCCAGGCTCTCCGTGACCTGCAGGCGTGGCCTGCGGCTCTCGATGACGGTCTCGGCCGAAAGGGGCGAGAGGAGACGGTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //