Array 1 66012-66894 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMTS01000026.1 Variovorax sp. WDL1 contig_700, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 66012 29 100.0 32 ............................. CGCAGCGTCAGGCTTTGGCGTGCTGCGTGCGC 66073 29 100.0 32 ............................. TCTTGTGGGGCGCTGACGGCCGCTGCAACGTC 66134 29 100.0 32 ............................. TAAATCCGTTCGCACCAAGGTGAGCCGCACGC 66195 29 100.0 32 ............................. CCGTGCTGGGGCGCGCGTACCGCGCAGCTGCT 66256 29 100.0 32 ............................. CAGTCTTTGCTTCCATCTCGAGACGTCGAGTA 66317 29 100.0 32 ............................. CCGGCGTCCACCGCGTTCGACATCGTGCCCCT 66378 29 100.0 32 ............................. CGAGGCTTGTTGCATGCAAAGAAGGGGGCTTC 66439 29 100.0 32 ............................. TCGACCATCGAGAGCATCGCCATCCAGGAGCC 66500 29 100.0 32 ............................. CCGACGAGGAAGCCACCCAGACATCCGTAGAC 66561 29 100.0 32 ............................. CGGCTGGTGATTGGCCTCGAGGACGCCGAGGG 66622 29 100.0 32 ............................. TGCGCTATCACCTGGCAAGCGCGCTGCATTGA 66683 29 100.0 32 ............................. CCCTCTTCGAAGTGGTCGATGCCGGTGGACAC 66744 29 100.0 32 ............................. TGAAATTGGTCGTCCTCGATTTGCTCACGCGT 66805 29 100.0 32 ............................. GTACGGGCTGCGGGCGATGAGCATTTGCTGAG 66866 29 96.6 0 ...........C................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.8 32 GTCTCCCCCGCGCAAGCGGGGATAGCTCG # Left flank : GAGACTCAAGTAAGGCGGCACCTGCGTGACCACTTTAAGCAAACGCGATTTGTTGCGCGGGTCGTGGATGACCTCAAAGGCCTGTTCGAAGAGTCGACCGCATGATGCTCGTCCTCGTCCTGACTGGTGCGCCACCTCGCTTAAGAGGCCGGCTATCAACGATACTGCTTGAGGTGCGGGCTGGCGTCTATACCGGGCACGCGACACAGAAACTGCGTGAAGAACTATGGGCGTTGACTTGCGGCAACATCGAGGATGGCGACGCCCTGATTGTGTGGCCAGACCAAACTGAGGTTTGCGGCGTCTCGTTCCGGACGGTAGGCGTGAATCGGCGCCGGGCGGTCGAAGTCGATGGGCTGCAGCTGGTGGATTTCCCTCGGTTGAGCACAGACGAGGTCCCTGAGTCCATTATGGATTTAGCAGGTCTAGCGGAGGTGGTTTTCCCCGGTGGACAGTGTGACAACTAAAATGTTTCGCTAAATCAACGGGTTAGGGGAAGA # Right flank : GCCCTTGATGGCCAAGTTCACGCCAATGAGCACGTCACCCCCGCTTGCGCGGGGATTGGAAGTCTCGGTCGACCGCCAACGGACAGCCCGTGCCAGGCTCTTGTGCTGCGGCGTGGAGCCTGGCCTCAGCTTTTAAGGCTGTAACCTATACTCGAGCGCATTGCGCTATCAGTGTCCTTTGTGATACAATGAGTGACGCTTTAGCATTCGTCGCCTACGTCATCAAGCAAGGCGGCATAATTTCACTATTTCGCTGTGCGCATGAACGTACTCTTAGACCCTTGGGTCCCCCTCCTGCTGCCAGACGGTACTGTGGCCAAGCAGCGCATGGTGGACATCCCTACCTCCGGTGCGCTTCGTGTGGAGCATGCCCGAGCCGACTACTCAGCGCTCATCACTGAGCTGGCGGTGTGCGTTTACCAGACCCTTGCGGCGCCGCACGACAGGATTGCGCGACGAGCTCTGGTGCGGGCCCCCGACCTTGCATTGCTGGACAAGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCGCAAGCGGGGATAGCTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //