Array 1 104684-106194 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSTW01000003.1 Phocaeicola plebeius strain OM06-2 OM06-2.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 104684 29 100.0 36 ............................. AAATTCCTTTCGGAGTATCTTTACTTCCTTTACAAC 104749 29 100.0 40 ............................. TCCGGATGCAGTTGCGCCGCATGAAGCATGCACGATGCCG 104818 29 100.0 34 ............................. AACAGTTCCAATCGCTTTAGTTTTCCGATAATGA 104881 29 100.0 35 ............................. TTAATTATGGCACAAAAAATAGAAATCACATCCGG 104945 29 100.0 35 ............................. ATAAGATGAAACGATATTGTCCTGAATTGGGTATA 105009 29 100.0 36 ............................. CATTTCTATCTCGATGGCCGGATTCCAGTCGTCCGG 105074 29 100.0 37 ............................. ACTATTACCTGTATTTCGTGGATATGGGTGTCGGTGC 105140 29 100.0 35 ............................. ATAAGATGAAACGATATTGTCCTGAATTGGGTATA 105204 29 100.0 34 ............................. TGAATAAAGATTTATTTATTTCTGCCGTTGCTGC 105267 29 100.0 36 ............................. TTGAATACTCCGTAATGATCACGCAAACGGAACATT 105332 29 100.0 34 ............................. TGATTTTCCGCGGTGTTTATCGTGTTGCCCCCAC 105395 29 100.0 35 ............................. GAAATATAGCTTTCATAAATTAAACAGTCTGGAAT 105459 29 100.0 37 ............................. CTTCGTAGCTGGTCAGAACGCCGTCGGCATCGGCCTT 105525 29 100.0 35 ............................. AGCCGAAAGTTACCTGCTTTCATGTTGGGGCTTAA 105589 29 100.0 37 ............................. TTTTTTATTGTCGTTAAATGTACCCAATTTTTACCTG 105655 29 100.0 36 ............................. AAAGGCATGAGCTTTGGGGAGAATAGTCCCCTCTTT 105720 29 100.0 38 ............................. GAAGAATGTATGAGAACCCTTTCATCACCTGCCTAAAG 105787 29 100.0 36 ............................. GGAAAATCATGATAAACGATGTGCAGACAAGCTATG 105852 29 100.0 34 ............................. ATACTCGTCAAACGTGGAAGTACAACCAAGTACA 105915 29 100.0 34 ............................. TGCAGAAGAAGATAGCGAAAAATCTTTACGTTCT 105978 29 100.0 34 ............................. ATAATCATGGTTTCGCTTTTAAGTATTCTTTGTT 106041 29 100.0 34 ............................. CATTCAATAGCCATGTTGGAATAATCAGGTATTG 106104 29 100.0 34 ............................. CGAGTATCAGATTGTGATTATACTCGGCCAGGGA 106167 27 86.2 0 .........C......T.--......... | C [106190] ========== ====== ====== ====== ============================= ======================================== ================== 24 29 99.4 36 CTTTTAATCGTACCTTATGGAATTGAAAC # Left flank : ACCTTTTAAAATGTACTGGTAATATGTATGTCATTCTGGTCTATGATTTTGGAGAACGGCGAGTCGGGAAGATGTTGAAACTGTGTCGGAGGTACTTGAATTGGATTCAAAATTCTGTGTTTGAAGGCGAAATCTCAGAAGCTCGTTTGAAAGAATTGTTGATGATGTGTGATGTCTTTATGAAAAAGGATGAAGATAGTATAATTATATTTAGTGGTTCTTCCCAATATACAATGAATAAGCAAATTGTGGGTAAAGAGCGTGCTGATATAGATATTTTTCTTTGAAGTCAGTCTGTCGATGTATTTCCTTTTTTGTCTTGGTAGAAATATCATTATTTTAATAGTTCTTTGACTTATTGATACACAGGAATTTATGAGGATGTCGATGCCTAATGGATTTTATATAATTGGGCATCGACATCTTTTTATCGTATTTTTATTATATTCGCATTGTGTAATATCCTTATTTTCAGTGTTTGTTATAAATTATAATGAAGA # Right flank : CTTGGAAACTAAAAAGTTTAAGGCAAAAAATCCCCTCCAGAACTCATTCATAACAAATAGTTCCGGAGGGGATTAATTTTATCTATATCTTTAAGTGGTACGGATTATTTGTATTCGTCCCAGCTCTTGATAGCGATGTCGTCAATGCTCATAGAGCAGAAGGCATTGATGAATGCGCTTGCCAGACGGGCATTGGTTACCAGAGGAATGTTCAGGTCGACTGCGGCACGGCGAATCTTGTATCCGTTTTCCAACTCGGTAGGAGTGAGGTCACGCGGAATGTTTACCACCATGTCGATTTCTTTCTTGTGTAGCATTTCCAGTGCCTGAGGCTGACCTTCTTCGCTTGGCCAGTATACGCGGGTGTTTTCTACTCCGTTTTCTGCCAGGAACTTAGAAGAACCGCCGGTAGCGAAGATGTTGTAACCTTTGGCCTTGAGGGCGCGTGCTGCCTGAAGCAAATCTACTTTCTGTTTCAGTGTACCGGTAGACATCAGGAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //