Array 1 6275-6906 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERKL010000015.1 Lactiplantibacillus plantarum strain Dm-2019-48 scaffold15_size69009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6275 36 100.0 30 .................................... CTTGAACACATTCCAGACAGCTTCACCGAT 6341 36 100.0 30 .................................... TACGGAATCCTATTATCAACGAATCAAACA 6407 36 100.0 30 .................................... ATCGTATTTGGAATGGTCAACCGAGAGATT 6473 36 100.0 30 .................................... AAAAAAGGACGCCGTTATATTTATTGGCCT 6539 36 100.0 30 .................................... TGAAGACCAGCTAAGCCATTTTAGATTGAA 6605 36 100.0 30 .................................... GAACGCTTCAGGAATACTAATTGAACCGAA 6671 36 100.0 30 .................................... CGCTTATTTCAACGGCGCTTGGCAAGATGG 6737 36 100.0 30 .................................... TTCCGTGTTCTTCTTCATAACAGCCATTTG 6803 36 100.0 30 .................................... GCGTTGACGAGCTTTAATCTCTCACGCAAC 6869 36 77.8 0 ...........CG.C..C.........T..C.C..T | AA [6890] ========== ====== ====== ====== ==================================== ============================== ================== 10 36 97.8 30 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGTCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGTCAGCTTCTTACTAGACTTACCGCTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTAAAGTTTACCGGTATTCACTTTCCAACGGCGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTTGTTCAGACGCATGTTGAACTAGGTTTGAAACAAAAACTGGTGTTGACTAATGTCAGCCATTACTTAAATCAAAAACAATGGGCGAGCTTTGAGCAACTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAATCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //