Array 1 50646-51653 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTOZ01000004.1 Selenomonas sp. mPRGC8 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 50646 29 100.0 32 ............................. CAGACATGATGCGAGCCATATTTAATCATGTC 50707 29 100.0 33 ............................. CTGAACAAAAGCTGGCGCATGAGGATAGAGGGC 50769 29 100.0 32 ............................. ACTACATCGGCAAAACGCCGAATGATGCAGTC 50830 29 100.0 32 ............................. GCAGGTTTGAATCCTATTCTTTCTGCTACTAC 50891 29 100.0 32 ............................. TAGTCGTAGATAGTGCCGGACGTACCATCACA 50952 29 100.0 33 ............................. TCATGCGAGTCATCCCTTCGGCATTGAGCTGGA 51014 29 100.0 32 ............................. CCATCGCAAATCTCCCAAGCGTTTGCCCAGTG 51075 29 100.0 32 ............................. TAGTAGCCGATATGAGCTGGCAGATATTTATC 51136 29 100.0 33 ............................. TACAGAAGTTGTGAGGACATCGTTGAGGCGGTC 51198 29 100.0 32 ............................. TCCTCATGCAGTCTGAACGTCCATCAGACGGC 51259 29 100.0 32 ............................. CCACCTCGTTATTTCGACAAATTGTTTGATGT 51320 29 100.0 32 ............................. CGCTATACTTTCATTTGGCGATGCGGGCTGAT 51381 29 96.6 32 ...........T................. TGCTATCCCCTGATTCTGGTCAATGTGTTCCT 51442 29 100.0 32 ............................. CCGCGACGGAATCCGCAGGGGAGCTTGAGCCG 51503 29 100.0 32 ............................. AATCACGGTTGCAAGCACCAGACAAAAAAGGG 51564 29 96.6 32 ..........................T.. AAACTCGAACTCCAGCGCCAGCTCGACGAACT 51625 29 86.2 0 ............T............GAG. | ========== ====== ====== ====== ============================= ================================= ================== 17 29 98.8 32 GTATGCCCCACGCATGTGGGGATGAACCG # Left flank : TTGATGTGTAAAAGATGGTCTGGTCGTGCGTGGCAGGAATATCTTGACTGGCAGCTGGAAGACAAAAAGACTATAAAACGAATAAACGCGCTGATAAAGAGTGTAGAGCGTGATGGCGTATTGGAGGGTATAGGTAAGCCCGAACCGCTTAAGCATAATTTGCAGGGATGGTTCAGTCGTCGCGTTGATGATGAAAACAGGCTTGTATACCGCGTGAAAGAAAATACAATAGAGATTGCCCAATGCAAAGGGCATTACTGATGAGCTGAGCTGGCAAAATGCTGGCTCAGTTTATTTGTAATGAAAATAATAGGGAAGATATTAGAATACGATCTGCGCTATCATTTCTCGACTTAAAACAAGATTGAATAGGAATAGGATAAATTTAGACATTACATAAGTTATAATTGACTTTTTAGTGAATTGTGAATATGATTGAGAGAGACACATAGCAAGGTGCTCGGACGTGTAAATGGCGAAATTAAGCCATTTCTGCTAGT # Right flank : GAGGAGGGGGCTTATGGCGAAGGATTTGAAAGAATTGCCTAAATTGCGCGATAGTATCAGCTACCTTTACGTGGAGCATTCGATAATCGATCAAGAGGATTCGTCAATTATTTTGCACCGTGGTAGTGAGGATGTACCTGTTCCGGTCTCGTCTTTGACTTGTTTGATGTTAGGCCCGGGGACGAATATTACGCATGCGGCGATTAAGACGGCAACGGAAAATGGCTGTATGATTGTATGGTGTGGGGAGCACTGTGCAAGATTTTATGCGGCAGGACAGGGTGAGACACGCAGTGCCAAGAATACGCTGTTGCAGGCAAAATGCTGTATGAATGAAAGGCTGCATATGATCGTAGTCCGACGGATGTATGAACTCCGTTTTCCTAAGATGGATTGTTCACAGATGACATTGCAACAGATTCGTGGTATGGAGGGCATCCGGGTAAGAAAATCGTATCAGATGGCGGCAAAGATGTATGGGATTCCCTGGCATAAACGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATGCCCCACGCATGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 60286-61355 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTOZ01000004.1 Selenomonas sp. mPRGC8 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 60286 29 100.0 33 ............................. CCTGTTGCATTTCTCAATCCGTTATATCTGAAC 60348 29 100.0 32 ............................. TTACACAGCCAGAACAATCATCAAACGAACCG 60409 29 100.0 32 ............................. GTAATGGCGTTACTACCTCATTCCCGATAACT 60470 29 100.0 32 ............................. AAGAACCAAAAATCACAGGAGCAGTAGTACCT 60531 29 100.0 32 ............................. ATAGTTTGAATCGAAAGCAGTTTTATAGGTAT 60592 29 100.0 33 ............................. TACCTGTGCATTTTGGTGACAAAAGTATACGTC 60654 29 100.0 33 ............................. AGGAGCTGGAAAAATATCTGCATGACCGTTGGG 60716 29 100.0 32 ............................. CAATTATCATCATGCATTTTAGCTTCTAAAAC 60777 29 100.0 32 ............................. CGCCGCTAAATGGGCGATACAGGCAGGATTGC 60838 29 100.0 32 ............................. CATACAGGATCGTCAATCGGTGGCGAATTTAA 60899 29 100.0 33 ............................. GCTGACGCCACCACCGATGTGGTTGATTCGTTT 60961 29 100.0 32 ............................. TGCTCCTCTCTCGTATCCGTCAATTGGACGAA 61022 29 100.0 32 ............................. CGGTTACAGACGAGCCAACACAAGGCGATAGC 61083 29 100.0 32 ............................. AGGAACAACCCTTCCAGTGCCCTCTTCCTCGC 61144 29 100.0 32 ............................. GTACTGAATATCAAGGCGTTGCAGGGCGACCC 61205 29 100.0 32 ............................. GTGCTCGGATGCAGCCCATCCACCGTGCAGCT 61266 29 96.6 32 .........G................... CCCTGCGCCTTGGTTGACAATTGCTTGTTGGA 61327 29 75.9 0 ..........T..GC..A.....T.T.T. | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.5 32 GTATGCCCCACGTATGTGGGGATGAACCG # Left flank : TGTATGGTGGCGATGAAGACATTTTCTCAGACAATGAAGTGGATTTTATGGCGGCGAAAACACGCCTGGGAGAAGCCAGCGTACGCATCGCAGTCATTCCACACGAAGAATTCGAATGTTTGCCCGCAAATGGCAAAGTGCGTCGTAAACAGGCCAAGGAGATATTAGGCCGGAGCGTGAGTGCAGCGGCAAAAAATATACAACCAGAAAAACTTACTTGCCGCAATGGCGAAAAGGCTTGGAAAGGCGAGGGACTATTGCAAGGCTTGTTCGTCTTTCCCGGTGATGATGGCCGCTGCGAATTCGCTAATGGCAGCTGGTTGGAGCTCAATCATGAATATGGCTTGCTGATGGATGGAGATTTGACTTTTGACAAGTCAAAAAATTGACAAGTCAATATATGGCCATTGACATTAGATGTGCAAAATAATAAGATTGAGTCAGACACATAGCGGTAAGTTTCTGCCGAAGAATGGCGTAATCAAGCCATTTCTTCTAGT # Right flank : GGATAGCTGGATGTAATCAAAGAAGCTGAGGAGAAACGTAAGCAAAAAAATAGCCCCGAAAAAGGGGCAGAAGTCAAGACGTATGTAAATGCCTGTAAAAACGTAATATCAATTTTACCAAAAACTTAAGGAATTCAACGGCTAAAACACTTATGAAGCAAAAGACAAGCAGTCCGAAGGAAGCTAGTCCCAGGCCGAAAATAGCTAAAGCCATACTTAAGCACCTCCGTAAAAGCTATTATATCTTTATTATACCAGTAGAGAGAAAATTTTTGTGGCTGTAGGAAAACTTTTTGCGATATCATTTGTTTTTATCCGAAATAAGAAAATTCTTTACAGTAAGAATGAGAAAGGCTAAAGGAACTCCTTGAGGTAGTAGATTTCGTGTCGACTACGCGCCGCTGGCAAGACAGGGGAAACCCGAGTAGATGCAGGGGGATGGCACGCCTGCCAAGGAGTTCTTATATTGATAGTCAAAGCACTTTGCAGAAGCAGGGTGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATGCCCCACGTATGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTTCGTGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //