Array 1 14883-14735 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVFF010000002.1 Citrobacter koseri strain CB00152 CB00152_c0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 14882 28 100.0 32 ............................ TCGTCGTTTGACTCGTGGCGGCTTCCGTATCT 14822 28 100.0 32 ............................ AACAGGCGTGGAGAACCACGGCGGAACGCTCC 14762 28 85.7 0 ....................T.C..T.T | ========== ====== ====== ====== ============================ ================================ ================== 3 28 95.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGAACTGCATCACTGGCCCGGACTGAGCCTGGCTTCAGGTAAACATATCCACCGCTGGGAACTCTTTGGTCCGCAGGGCGCGCGCGCTGAAGTTCACTTTACACCGCGTTTGATCACCACAGACATGCTGGCGCTGCGTGAAGCGGCCGTTGCGGGCGTCGGCCTCGTTCAGTTACCTGTTTTAATGGTGAAAGACCAACTGGCTGCGGGGGAGCTGGTTGCCTTGCTGGAAGGATGGGAACCCAGAAGAGAGGTGATTCATGCGGTATTCCCGTCCCGCCGTGGATTATTGCCGTCCGTACGCGCGCTGGTGGATTTTTTGACAGAAGAGTATGCGCGGATGGTGGAAGATTAAAACAGAGCGCAATACACCCTTTTTTATTTCATGTTATTAACTTATTGATTTTATTATATATATACAACTTGGGTGAAAAAGGGGCTGACAGGAAGACGTTGCGTTTTTCTTCAATAAATCAACGTGATTGTCTGATATTATTCCT # Right flank : TGAATGTAGAAGGAAGGGACGCTGCGGGGAATAAAAATAACGTTAATTCGCATCAACGGTATTCATGCAGGAAAGGGACAACAAAAAGGCCGGATAAACCGACCTTTTTTTATCTTTACGCCACCCGGGCGTGAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTACGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAATTCTACGCGGAACATGGTATTAGGTAACGTTTCGAGAACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTTTAAATAAGTAAAGATTTGCGCGTTTAAAACGCAGCAAATCAGGTTTGGCGCATTACTCCGAAAAACACGGCAAAGCCGCACT # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 27619-26448 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVFF010000002.1 Citrobacter koseri strain CB00152 CB00152_c0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27618 28 100.0 32 ............................ AAAGAGAGAAAACCCGCCAAAGCGGGTCATTG 27558 28 100.0 32 ............................ AGTACGTTTTCGCCGCGCATGACGACGAGAAA 27498 28 100.0 32 ............................ GGCGACATTCGCAGCACCGGCACGCAAGCCGA 27438 28 100.0 33 ............................ CTTTTCGCTTGTCGTCGCATCCGGGTGATTGCG 27377 28 100.0 32 ............................ GTCTTAACGGGAAGCGTGTACGGGACCCCGCC 27317 28 100.0 32 ............................ CCTCCAATAAGCCGAGCAACAGCTCGGTTTTT 27257 28 100.0 32 ............................ TGTTTCGCAGGCGTGTTAACTATGCCTTTATC 27197 28 100.0 32 ............................ TTGCCCTGCGCATCCATAACGCCGGGCTGACG 27137 28 100.0 32 ............................ AACAAAGGTGAACGGAATTTCATTCCAGTATT 27077 28 100.0 32 ............................ TTGCGCGCTATCTGCTCTGTCGTATCGCCCAG 27017 28 100.0 32 ............................ GTAAAACGCTCCAGCGCTTTATCTGACCAGCG 26957 28 100.0 33 ............................ ACAAAAGGCGCTGGCGTTTCTTCGGGGGCAAAT 26896 28 100.0 32 ............................ GTTCAGACTGAAGGCGGTTTTTTAATTAAGGC 26836 28 100.0 32 ............................ TGACTTTGTACCCGGCTTTGCGCAGGCGTTTC 26776 28 100.0 32 ............................ GAAGACGTCACCGTTACGATCGGGAAGAACCT 26716 28 100.0 32 ............................ CACCATTTTTCGAATATGTAACGGTCAGGCAC 26656 28 100.0 33 ............................ TCCGAGCGTGAACACTTACTGGCGCGCCCCTAA 26595 28 100.0 32 ............................ AGGAAAGCGTCGGTCGCTGGGGTTGTGTTAGC 26535 28 100.0 32 ............................ GATTTGCGCCCCCGTATTGTCCAGCGCTTTAT 26475 28 85.7 0 ......................ACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATCAGAAAGGCGTCTCCCTGGAAGTGAGTCAGGAAGCGCGTGACTGGCTGGCAGAGAAAGGCTATGACCGCGCGATGGGCGCACGTCCAATGACGCGCGTCGTCCAGGACAACCTGAAAAAACCGTTGGCAAACGAGCTGCTGTTCGGTTCGCTGGTTGGCGGCGGCCAGGTGACCGTTGCTCTGGATAAAGAGAAAAATGAGCTGACGTATGGCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCCGCGCATTAATCTCGTAACCGGTAAAATCTGAACGCCAGTCGCGTTCAGATAAACTCGCTAAAATCCGTAATCTCTTTTGAGGTTACGGATTTTTTTTGCCGTCATGCCCCGGATACCTGGAAACCCTTTTTTTGAGTGTTTTTTTAACGCTATGATTTTTATGTGTTTATATTAGGTGGCGATAAAAGGGTATTTAATCATTTCGTTGATATTTTTCTTTATTAACACCATGATAGCGACGAACAGATTCA # Right flank : CCACAAATGTAATTATTTATTTTGAAAGCTCTTTTGTTGATTTTTATCATTTCATCTGCCGGAGCCTCATCAGTACTATCGATAACACATAAAATGACGGGGTTTAAATAGATATGTCTGCAAATTCAATTATGCCTTCGGATTTAAAAACCATTCTGCACTCTAAACGCGCCAATATATATTATCTTGAAAAATGTCGTGTGCAGGTAAATGGTGGGCGAGTTGAATACATTACGAGTGCAGGTAATGAATCATATTACTGGAATATTCCTGTCGCGAATACTACGGCGGTGATGCTGGGTATGGGCACGTCAGTGTCACAGGCGGCGATGCGGGAGTTCGCAAGGGCTGGCGTGATGGTTGGCTTCTGTGGCACTGATGGTACGCCGCTTTATTCCGCAAATGAAGTTGATATTGATGTGTCATGGCTGTCACCGCAAAGTGAATATCGGCCGACTGAATATTTACAGCATTGGGTCTCTTTCTGGTTTAAAGAAGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //