Array 1 212-1319 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXVR01000086.1 Pseudomonas aeruginosa strain MRSN16345 MRSN16345_contig00086, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 212 28 100.0 32 ............................ CCGGATTTCAGGTACCTCGGCCGGTCGAAGCG 272 28 100.0 32 ............................ GACGGGTTGTTCGCTGTTCCTGTGAAGTAAGC 332 28 100.0 32 ............................ TGGCGCGAAGCCGAGCAGCAATGCCGCGACGG 392 28 100.0 32 ............................ GGCGTATCCCGATTATCGGTTGAGGTGATGTA 452 28 100.0 32 ............................ AGGCCGGCGCCGATCTGCCCGCGACGAGGTAC 512 28 100.0 32 ............................ TCCACCGGGTTTTTGTCAGTCCATCCGGCCGC 572 28 100.0 32 ............................ TGTTCCGCCAAGCGCTACCGGCACCGTGTCGC 632 28 100.0 32 ............................ TGGGTGGCGTGCCTGCTCAGTGGCTCCAGGTC 692 28 100.0 32 ............................ TGGTAGACGGGATATGGATCGGCGAAGTCCTC 752 28 100.0 32 ............................ GATGACGAAAGAGCCACCGCCGCCCTCCACCG 812 28 100.0 32 ............................ TCCCATAGACTTGCCGATCTCGGCTGCGGCGC 872 28 100.0 32 ............................ TTGACCAGATCGCGGCGTGGGGTGGTCGGCTT 932 28 100.0 32 ............................ GCTGTGCGTCGCCGTGGTCTGACGGTCGAATC 992 28 100.0 32 ............................ AGCAGATACCCGAACCACTGGAGGTACATGCA 1052 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 1112 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 1172 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 1232 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 1292 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : AAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTGGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //