Array 1 2664960-2663404 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040780.1 Lacticaseibacillus rhamnosus strain 1.0320 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2664959 36 100.0 30 .................................... ACAATTACCCCAGATTGACCCAAAACGTCT 2664893 36 100.0 30 .................................... TGTGTCGATGAGTTGGCTGCAGGCGATTGC 2664827 36 100.0 30 .................................... GTTTCAATTGATTTGGATATAAATTTGTTT 2664761 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 2664695 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 2664629 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 2664563 36 100.0 30 .................................... TGGCTGGCAAATTGTTGGAGATGCTTTTGC 2664497 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 2664431 36 100.0 30 .................................... CAAAAATGTCAATGTGTCGATGACCTGGCT 2664365 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 2664299 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 2664233 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 2664167 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 2664101 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 2664035 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 2663969 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 2663903 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 2663837 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 2663771 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 2663705 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 2663639 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 2663573 36 100.0 30 .................................... GGCCAGCGACTGGGTGCAACAATTACTGTT 2663507 36 100.0 30 .................................... CTTAGAATAGCTTTATTGATTTGGTTATTT 2663441 36 83.3 0 ....T..................AA.C....G...A | T,C [2663407,2663413] ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.2 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //