Array 1 267414-272486 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSYQ01000001.1 Empedobacter falsenii strain 282 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 267414 47 100.0 30 ............................................... GGAGCTACTGAAATCACCAACAAAGAATTT 267491 47 100.0 30 ............................................... CCGTTTGGCAAGTAAATGAGAAAGGATTTA 267568 47 100.0 30 ............................................... TCAAAATGAAGTTAATATAATTGTGAGCTG 267645 47 100.0 30 ............................................... CTTCACCTTGAGCGGCTCTCACTTTGTTGA 267722 47 100.0 30 ............................................... AAGTTTGCTTGTTTAGCGATACTTTCTAAG 267799 47 100.0 30 ............................................... GGCATTTGGTTCGTTCATATTTATCTTTAT 267876 47 100.0 30 ............................................... CGTAAATAAAGTATCCTGTCTCATCTTTTG 267953 47 100.0 30 ............................................... CGTATGTCTAACGAATTAACATTTTTGTAT 268030 47 100.0 30 ............................................... ATCAAAGTTGAGTTTGTTACACCAGACGGT 268107 47 100.0 30 ............................................... GTCTTAAAATCTTTTCGATTTTATTCATTG 268184 47 100.0 30 ............................................... GAAACTCGTCACGTAACATCATTTGTTTTA 268261 47 100.0 30 ............................................... CGTAATAGAATTGCTAAAAAGTTTGAAGAA 268338 47 100.0 30 ............................................... GACGCTAAACGCGTATCTGTAAAATTAATG 268415 47 100.0 30 ............................................... CATCTTGGATTGATTTAGTTCAAGAATTTT 268492 47 100.0 30 ............................................... TAGCATCTTTAATCGCTTGCTGTCTATTAT 268569 47 100.0 30 ............................................... TACTCCTTGTGTGATATCTGTGATTTGTGC 268646 47 100.0 30 ............................................... AAATCTTCTATATTACCTCCTTCCAATGTA 268723 47 100.0 30 ............................................... AACTGCTGTATTCATTTTTATATATTTTTA 268800 47 100.0 30 ............................................... CACGTTCTTGAATATTAAAACCATCAGCGC 268877 47 100.0 30 ............................................... AGTAATGTTGAGTTCTTTCGTAGCGTTTTT 268954 47 100.0 30 ............................................... TTGTGTCTATATTTTTCTGCCATTGTAGAG 269031 47 100.0 30 ............................................... GCTTTCTTAGAAGGTTACGAAAGCCATGGA 269108 47 100.0 30 ............................................... TGGATGAAATAACGGTACCGGTACCGCTTT 269185 47 100.0 30 ............................................... GGTGCGTTTCAACTTAGCACAACCAATACA 269262 47 100.0 30 ............................................... ATTGAGCATTATAAAGAATAGATCCTGCTG 269339 47 100.0 30 ............................................... ATTTTTGCCGTTAATTGTTTTGCTTCTGCA 269416 47 100.0 30 ............................................... TTGGTCGATTCGCTTTTACGCAATGACTGC 269493 47 100.0 30 ............................................... CAGTTGCAGAATCTCTGGTAGACATATCTA 269570 47 100.0 30 ............................................... TATTTCGATGATACCTCTCTCTTTCCTTTC 269647 47 100.0 30 ............................................... ATTACAAATGTCGTTTGGAAATTCAATGGA 269724 47 100.0 30 ............................................... AATAACATATATACGCTGAATCGTTCGATT 269801 47 100.0 30 ............................................... TAAATCCTTCGTTAAAGGAATTTCCCTATT 269878 47 100.0 30 ............................................... TGCTTTTCCAGCAAGATATATTTTGTCGCC 269955 47 100.0 30 ............................................... AAAATATCATCCTTAAAAACAACAAACAAA 270032 47 100.0 30 ............................................... ACTCTACCGATTTATATATGACATTTATTT 270109 47 100.0 30 ............................................... CTATCCGAACGGCTGAATTGGTCGCATTGC 270186 47 100.0 30 ............................................... ACCATCTAATGAATTACCTGCATTTGTAGC 270263 47 100.0 30 ............................................... ATTAACTCGGATAATGTTAACGACGTAATA 270340 47 100.0 30 ............................................... TGATTAGTGTACACGCCAACGCCGGAGGCG 270417 47 100.0 30 ............................................... TAAATTATTGGCTAAATCAACCCCAATTAA 270494 47 100.0 30 ............................................... GGGAGGGGTCAACGGAAAGTTCGCAACAAG 270571 47 100.0 30 ............................................... GCAATTGGTAAGGTGATTAAATCAAAATTT 270648 47 100.0 30 ............................................... ATCTGGAGATAATTGAAATAAAATGAAATT 270725 47 100.0 30 ............................................... GAAGTTTAATATTGCAAAACTCCCTTTATT 270802 47 100.0 30 ............................................... ATTAAGAAATATGCAACATTAGAAGTGCAA 270879 47 100.0 30 ............................................... GCAAAACAGTAAATATTTTAAACTCGTGGT 270956 47 100.0 30 ............................................... AGGGTAAAGCTCATAGCGATAGTATGATAC 271033 47 100.0 30 ............................................... GAGCAGGATTTGTTTGACGATAAAGTTGGC 271110 47 100.0 30 ............................................... GTTAGGTGGTCGCTACTGATCCAGCGATCG 271187 47 100.0 30 ............................................... ATACTGGATTGATTGAGAAAATTATCGAAA 271264 47 100.0 30 ............................................... TTGGATTCCATTTCTTAGGATCGATATAAA 271341 47 100.0 30 ............................................... GAAATGCGTGTTAATAAAATAGATTTTTTA 271418 47 100.0 30 ............................................... TACAATTTGCTGAAAAATTTTTAAATCAAA 271495 47 100.0 30 ............................................... TTTGAATAAATTGAAAGAAGCTGATCGTGC 271572 47 100.0 30 ............................................... TATCCATTGTATTGTTGCAAATCTGCATTT 271649 47 93.6 30 ...................................TC..T....... TAGGAAACGAATTAATTGATAAAGAGATTG G,T [271677,271679] 271728 47 91.5 30 .......A...........................TC..T....... TAGGGTAAAATCATTCGTATGAACACAGAA G,T [271756,271758] 271807 47 91.5 30 .......A...........................TC..T....... TTTTCAGAGGTAAAAACGTCCTCCGCAAAA G,T [271835,271837] 271886 47 91.5 30 .......A...........................TC..T....... TACGACATTACAGCTATTTTACCAGCGTTG G,T [271914,271916] 271965 47 91.5 30 .......A...........................TC..T....... TTAGTATAGTGGTGGTTTAGGTTTTTCGAT G,T [271993,271995] 272044 47 91.5 30 .......A...........................TC..T....... TCTTCCGCTTCGTCATATATCCAGCAGTTG G,T [272072,272074] 272123 47 91.5 30 .......A...........................TC..T....... TCTTCTGTTGCTGAGTTTGAAATAACTTCA G,T [272151,272153] 272202 47 91.5 30 .......A...........................TC..T....... TCAATGATGTCTGGTAGATTTATAAAGACA G,T [272230,272232] 272281 47 91.5 30 .......A...........................TC..T....... TATACTATTAGAGTTAATTTACAATCAAAA G,T [272309,272311] 272360 47 91.5 30 .......A...........................TC..T....... CCAATTTCAGAGCGTGATTGGTGTACTTCT G,T [272388,272390] 272439 47 80.9 0 .......C.....ACG....AT...A...G.A............... | T [272464] ========== ====== ====== ====== =============================================== ============================== ================== 66 47 98.5 30 GTTGTAATTACTTTGATAAATATACCAAATTGAAAGGAACTCACAAC # Left flank : CGTTGTATAAGTGTATGACAGGGGAGCAGCGTATGATTCGTTTTCCTGAAATGGTATGAGTTTTAGTCGTTATAATGCATATCGAATTATGTGGGTTTTAGTTTTATTCGATTTACCAACCGAAACAAAGAAACAACGAAGTCAGGCAACAAGATTTCGAAAAGAATTGCTTGACGATGGTTTTGCAATGTTTCAGTTTTCGATTTATTTGCGGCATTGCCCAAGTAAAGAGAATGCTGAGGTACATATAAAACGCGTCAAATCTAAATTACCTGAATATGGGAAAGTAGGAATTATTTGTATTACCGATAAACAATTTGGACAAATGGAGATCTTCTTTTCAAAAAAAGAAACTAATTTACCCACAGGACCCCAACAATTAGAATTGTTTTAGAAATAAAAAAACCGATAGAATAATATGTATTCTATCGGTTTTTACTTTTTTTCTCATTTCTACTTTTCTTCTCAAACCCTTTAAAACAAAGGTTAATAAAAATGAG # Right flank : CCTGTTTGTTATCCTCGTAATGAACCCAGTCGTTGTAACTACTTACGTAAAATTACTAAAAAAGCTCTTATCCAAGAGCTTTTTTGTTAAAGAAATGTTTTGGGTAAAAGTACTTTTTACCGAGCTTAAAACAAGGAATCGTCTTGTTTTTCCTCATGCGATACAACGTTTTGTCACTAACGTTAAGTAGCCTTTGCACATCTGCACTGTCGTAGAATCCGTGATCTTTGTCCGTGGGTTGTATATTCGTAATTAATTCTACTAAAAGAAGTTTTAACTCGTTGCTATCCTTCTCTTTTTGTGTAAAAAAGTAAGTGTTTTGCATACGTATTAATTGACTTAATTTCAGCAAGATACGTATTTTAATTAAATAAAACAAATCATAAGAGGAAGTAGGGATAGGGAGGGGGTGTTAATTTTTTTTATTGATTTTCTGTTTTAATTATTCGAATTTCTTTTTTTAATGTCACTTTTTTTCGTCAAAAAAACTAACGAAAAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTACTTTGATAAATATACCAAATTGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAGTTCCTTTCAATTTGGTATATTTATCAAAGTAATTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-33] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //