Array 1 24175-25533 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMFT010000003.1 Enterococcus gallinarum strain U1908814 NODE_3_length_275927_cov_36.709775, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 24175 36 100.0 30 .................................... AAACAAAGAAATTATCGAGTCTGTTGATCC 24241 36 100.0 30 .................................... AGATTTGCTGGATGTTTTAAAACTTTTGTT 24307 36 100.0 30 .................................... AGTTACCATCTGTACTGGTTGCGCTGTGAT 24373 36 100.0 30 .................................... GCTAAAGATATTATACTGTGAGAATGTTAC 24439 36 100.0 31 .................................... ATAAGGTTGCCCATTGTTCTTCGCTGTAAAC 24506 36 100.0 30 .................................... CTACTCCTTGAGAATGCTTTGGGCTTTGAA 24572 36 100.0 30 .................................... TTAAGGGACTTTTCAGGGGTCAAAATTCCT 24638 36 100.0 30 .................................... ATTCAAGAATTATTTCCAAAGCTTCCACCA 24704 36 100.0 29 .................................... TTTCTTTAGTTCTTTGTACAATCGTTCCG 24769 36 100.0 30 .................................... GCCAGCTCCTCAGACAAGAGATAAAAGTTA 24835 36 100.0 30 .................................... TGTTCCATTCTCCGAAAAAGATACCCTCGT 24901 36 100.0 30 .................................... AGCTGATCTGTGGTAATGTTTACCGGTCTT 24967 36 100.0 30 .................................... TACTCCTCTACTCTATTGATGAATCTATGA 25033 36 100.0 30 .................................... CAACGGTCACGGACCACCCAAAGATCAAGC 25099 36 100.0 30 .................................... ATCCACATCAATCCGCCCTCTCACTTAGAA 25165 36 100.0 30 .................................... CGCTGGTATAGTGTTGTACGAATTTTTGTT 25231 36 100.0 30 .................................... AGGAAACAGCAATGAAATCATACAAAAATG 25297 36 100.0 31 .................................... TCAGTAGACTTTGACGAATGGAGAGGCTAGA 25364 36 100.0 30 .................................... TTTCCGTTTGACTAGCTTGTCATTAGGACG 25430 36 100.0 30 .................................... AGTGAAATTTTTAGATCTGTTCGCAGGTAT 25496 36 88.9 0 .........................ATCA....... | GT [25529] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.5 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : TCAATGATTGATAAACTTTCAGCTACGATAAGTGAATTAATCAATTACGAGCTTTTAGAATATGAGTTAGATTTAGAGAGTGACGAAATTACCATGATCGAATTATTCAAGTCGCTGGGAATTAAGATTGAAACAAAAAGTGATACAATTTTTGAAAAAATGATCGAGATCATTCAAGTATTTAAAAATCTCACCAAAAAACGGTTATTAGTCTTTGTGAATAGTTGTTCTTATTTAACAAAGGAGGAACTCGTTGAACTGAACCAGTACGCTTCCCTATATGGAGTAGATACACTCTACTTAGAACCAAGAAAAGTTGAGGGAATGAAACAATACATTCTTGATGAAGATTATTTCTTAGAAGTATGTGAGTGATATCCTTCTAATATTGTTCCTTGATAAATGAATAAAGTTCGAATTTATGAAGCATTCAAAGCTGAAATCTTGCTATGGATGAGTAGCGCGATTACGAAATCTTTCAAGAAAAATTTTTCTACGAG # Right flank : CGCGATATTTTTTCCAATAGACATATTATGGCTCTCCTTTCTTCTTACGATATAAGGAAATGTGGAGATTCCTGCCTCTATTTTAGAGGGGCTATTATATAAGAAATCTGTGAATTTAAGATATCAAATAACAGGATAGTGCGTAATAAGAAAAGCCAGTCATCTCGGACTGACTTCGCGGGGATAATTATGTTCGCAAGAGCTACTAAAGCTTTTGGTTTTAAGATATTTAGTGTTGGTGGGAAATCTACGGATTTTCTACCAACATTTTTTTTCGTGAAAATAAATGAACATTCCAAAAAGCATGATTTAAAACAATCCTTTGAAAGATGAGAACTAAACTACTCTTTGTCTTGAGATAATGTTCTAGTCCCTGATGTGAGCATGGTCGGAACAAACGTAATGATCTGGTCACAAGTCTTTTTACTCAGGAGTCTTTTCAAATTATGAATCACTAGACGAGCAATTTCTTCCACGTCTTGTTCAATATAGAAATTACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //