Array 1 28465-29223 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSJJ01000208.1 Erythrobacter donghaensis strain CCH1-A1 CCH1-A1_contig263, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 28465 36 100.0 30 .................................... GACAAGCCGCTGTCGCCAATCGTCAGGTCG 28531 36 100.0 30 .................................... TGCTGCTACCCCTTCCCGCGCGCGCGTCTC 28597 36 100.0 30 .................................... ATCGACGGTCGCCAGAAATTGCTCGGCAAT 28663 36 100.0 30 .................................... TTCTCGATGCGGTGCTGCGGGAACAGCCGC 28729 36 100.0 30 .................................... TGCCGGAATGGCCGCTGCCGCGAACCGAAG 28795 36 100.0 30 .................................... GAAGCGCTCGCTCAAGAGCGACATCGCCAC 28861 36 100.0 30 .................................... CCGCCTGAGAGCGATGAGCCGCATTTCTCG 28927 36 100.0 28 .................................... TCGCTGTCTTGCCAGCGCCGCTGTTTGA 28991 36 100.0 30 .................................... CCGCGCAACGCGGCGGATACGGCATATTCG 29057 36 100.0 30 .................................... AGCGCCGCCGTGCCCTGCTGAAGGCCCGCG 29123 36 100.0 29 .................................... ATGACCTGCTGCCCATGGCGAATCTGCGC 29188 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Left flank : CCCCACAGCCTCAAACGATGGCGCAATCTGATCGAGGCTGAGGAAGTCGAGAGCGACTGGCGGGCGCTTTTGCACCCGTCGGCGCGGCCGCCGATAAGCACAAATATAAGCACTAGGACTGATGAAGCCGAGCGTATCCAGAGCTTGAAGGCCGAGATCGATGCCTCCGCCGGACCGCCAAAGCGAGCGACGCGGCGGCGCTTGTCGTTGAAGGAGAAGATCGCGCTGCTCTTGGAGGCCGAGCGTCATGGCGAGACCATCTCCTCGGTTGGCCGGCGGCACGGTATCTTGACCAGCGTGCTGTTCCGCTGGCGCGACCAGCGCGATGTGGCGCGACGGCACTTTTTTCAGCGAGTGGCGGATGACGTTCTCGATATCGAGGAACTTGCGCTTGAGGTTGCGCCGCTGCACCAGCAGCAAGGGCGCCATCTTGGCAGAAATCCGGCGCGCGCCGCGCCGATCGACATAGCGGGCCATCCTTGGCCCGCTATGTCGATTTC # Right flank : CAGGTCTACGGTAACGGATTGGAAATGCTGTGATTTTCGCGGAGATTTTCCGCCGAAATCACAGCAGAACCATCTGGGATGGCCCGACTTGTTCAGTTTTTGGCGCGGTCCCTAGCATCAATTCCATTCTGCCATACTGCTTGTCCGTAACCTGGAGCGTCCTCACGCTGCCCTCCTTGGGCAGGCTGCTTCGCACCCGGCGGATATGCTTATCCACAGCATCTTGCCCCCGGCAGACCCTCGCGTAAACCGAAAGTTGCAGCATCATGTAGCCGTCCTTCTTGAGGAACTGGCGAAATTGGCTCGCTCGCCGTCTCTGCGGTTTTGTTTTCACCGGCAGGTCGAAGAATACCATCAACCACATGAAGCGTACCTCGTCGGCCTCCATGCTTAGTTGCGCCGAGCCAGCGGAAGCGCCGGTGTGTTCAGCGGTGTGGCGTTGCCGGCTTCGATCGATCTGACCAGACTGGCCGCGACCGCCTCTGTTGCTGCAAGGATCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.80,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //