Array 1 522224-528061 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024176.2 Moraxella osloensis strain YHS chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 522224 36 100.0 33 .................................... GTAGAAAGCAAACTCACCAGTGTTGCCACCGAT 522293 36 100.0 33 .................................... ACAAATGGCTCTGAGAGCTTGTATTTGGCTTTC 522362 36 100.0 34 .................................... TCATATTTAACCTCTACCTTAGCCATATCGCCGA 522432 36 100.0 34 .................................... ACTTATTTCATAATCCCCATCGCGGTTGGTAAAG 522502 36 100.0 34 .................................... TGTAGCAGTTGTTACTTTTACATTATTTGCTTTT 522572 36 100.0 33 .................................... AAGTACACACGACCGTAAATCTCAGGGTCATGG 522641 36 100.0 32 .................................... GAATGACTCACATTTTGTATAAGCGTCTTGGA 522709 36 100.0 33 .................................... GTACGGTTGTTTCAGTATTTTTAACACGGTAAA 522778 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 522867 36 83.3 35 .AAG.C.A.T.......................... GCACCAGCATTTAAATCATCCGGCAAGGTGGTAAC A [522877] 522939 36 100.0 34 .................................... GCCCAATTGTCAAACCAACCTGCATTAAAATCTA 523009 36 100.0 35 .................................... CATCACTGTACAATTTTTAAATCCAAACTTTTCGA 523080 36 100.0 34 .................................... TGAAAGAGTACAGTTTTAAAAACACCTACGTTCG 523150 36 100.0 32 .................................... GTACGTATTGTTGATAAGAATTCCCCGGGTCG 523218 36 100.0 33 .................................... GTACGGTTGTTTCAGTATTTTTAACACGGTAAA 523287 36 100.0 33 .................................... AAGTACACACGACCGTAAATCTCAGGGTCATGG 523356 36 100.0 34 .................................... TCCTTATACAATGAAAGAGAAAAAGAAGTTCAAA 523426 36 100.0 33 .................................... ACTTCCTTGCAAGCTTCTGTTAAAGAGTCTGCA 523495 36 100.0 35 .................................... TTAGAGCAACCCACTTGGGCTGCTACTAATAAAAT 523566 36 100.0 34 .................................... ATAAGGACAGTATATTTATAGACCCCTGTCCAGG 523636 36 100.0 33 .................................... CCTTAACTCATCAGGTGTCTGTTCTTTTCTGTG 523705 36 100.0 34 .................................... GAAATGTCTGTACCTCCACCGCCTTTCATCTTAA 523775 36 100.0 34 .................................... GTCTTCCACTGATACAAGTCCAGACGCGATTAAA 523845 36 100.0 34 .................................... GTACGAGGCATTGTGCCTCGAGAAATGATGCACA 523915 36 100.0 34 .................................... TTATTGCTGTCTGACGCATACAAGCCAAGTTGCA 523985 36 100.0 35 .................................... GTTGTGCATGTGCTTCTAATGTCCATAGAGGTGTT 524056 36 100.0 34 .................................... CCATCAGAACCACCTTGAGCATAAACGATAGAGT 524126 36 100.0 34 .................................... GTGATGACGTAGTTGATTGCAATTAACTGGTGAG 524196 36 100.0 36 .................................... ATACTGAATGCTACAGGATTTTCTACAACATCTGTA 524268 36 100.0 35 .................................... ACAGCCTGCAGCTGCTGCAATTAAAAGAATGTCAA 524339 36 100.0 34 .................................... GTAATATCGGTTACGTGACCCCAATTACCTTGCC 524409 36 100.0 36 .................................... AATTGTACGAGTACCAAGCTTCTGAAGATACATCTA 524481 36 100.0 34 .................................... AGCCAGTGTCAACAAATCTAACTAAAACCTTTGA 524551 36 100.0 34 .................................... GGTATCACTTGCAGTTCCGAGTGACATTTGTACA 524621 36 100.0 34 .................................... GAATTTAGCGGTAAATTTTAACATGGTATATGCT 524691 36 100.0 34 .................................... CGTGAGTAGGTTTGTCTTTACCGTTTGCAGATGA 524761 36 100.0 34 .................................... TGCATGACAGGAATTTGAACATAATGTCCATCAG 524831 36 100.0 32 .................................... TTATTAGTATCGTTATCCCCGTACTCTTCTTT 524899 36 100.0 35 .................................... TCCTGAGTTTCCTCCAAGTGTACATTTTCCTTGGC 524970 36 100.0 34 .................................... GGTCCAGACCCGCTTTTTGTGCAGTGTTGATGAT 525040 36 100.0 33 .................................... CCGTCACCACTTAAATACTTATCGGTTCTTTTA 525109 36 100.0 34 .................................... TGCTGCTCAATGTATTGTAGGAATTCGTCTGCTG 525179 36 100.0 35 .................................... TGCCGTTTCTGCTGGAGCAGCAGCGGAGGTGTTAT 525250 36 100.0 32 .................................... GTGTAAAAGATAAGTAGTGCTATCTCTGTGCG 525318 36 100.0 34 .................................... CTTAAGAGCTTTACCGTATACTCTTGCTCTCTTA 525388 36 100.0 34 .................................... GTCCACCACCCAGCTTCCTTAACTAAACGTTCAT 525458 36 100.0 33 .................................... GTTAGACTCTACTCCATATGCTTGCGCAAATAG 525527 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 525616 36 83.3 33 .AAG.C.A.T.......................... TTGCTCATGCAAGAACGTATGTTGTTATTTTCA A [525626] 525686 36 100.0 34 .................................... TGGTGAAAGATGACGAAAAGCGTCTTCCAACAAA 525756 35 83.3 54 ...G.....................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 525845 36 83.3 34 .AAG.C.A.T.......................... GGTTGGTTTGATTTCTTCTTCACGCATATAGTCA A [525855] 525916 36 100.0 33 .................................... CATCACGAGTAACAGTCATACCTTCTTTTAGTT 525985 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACTGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526074 36 83.3 35 .AAG.C.A.T.......................... AACACATCAGCCGTCTGAGTAGCTGTACCAAAGAT A [526084] 526146 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACTGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526235 36 83.3 35 .AAG.C.A.T.......................... AACACATCAGCCGTCTGAGTAGCTGTACCAAAGAT A [526245] 526307 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAATTCACTTAACGT 526396 36 83.3 34 .AAG.C.A.T.......................... TCACTAAATGCTAATGATGTATATTTCTCACTAT A [526406] 526467 36 100.0 33 .................................... TTACTACCCTAACTTGAGGAGTACCTTCATAGT 526536 36 100.0 36 .................................... TGCGTTAGATTCACCAGCACGTGTGATGTACTGATA 526608 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526697 36 83.3 32 .AAG.C.A.T.......................... GCGAACACGGGTAGCCTTAGCTTGGTCAAGAC A [526707] 526766 36 97.2 35 ...........C........................ TCAGTTGCGTTACCAGCTTTGATGACTCGGATAGG 526837 35 86.1 54 .........................T..-G.G...G CGGGTTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 526926 36 83.3 32 .AAG.C.A.T.......................... CATTGGGCTGGATTTTGTTTACGGCTGTTTTC A [526936] 526995 36 100.0 34 .................................... AATAGTTTTGAGTAGTTTTTAATGAGCAGTACCG 527065 36 100.0 34 .................................... CCAGGTTTAGCATCCATATACCCATATTGGAAAT 527135 35 86.1 54 .........................T..-G.G...G CGTATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527224 36 77.8 32 .AAG.C.A.T....T..........C.......... TGTTTTTTAAGCTCGCAGATATGTGCGCCCAA A [527234] 527293 36 97.2 33 ............T....................... CTTAGCATGTCCCTCTGCCTTCCACTTAGAGAC 527362 36 100.0 34 .................................... CCACCTAGGACAGTGAAACCAGCCTCACGAACTT 527432 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527521 36 83.3 34 .AAG.C.A.T.......................... TCTGTCAGCAGGTTTTCTTTTAGGTCTTGTTTGA A [527531] 527592 36 100.0 33 .................................... TCATCTAACATATTCCAAGCGGTTTTTGTTTTG 527661 36 100.0 33 .................................... CGTAGCAAATTGATTGGTTTATAGTCATCATTG 527730 36 100.0 32 .................................... CGCATTTTACTAGCAGCATCAGAATAAACTTC 527798 36 100.0 33 .................................... GTTTATGGGTAGAAGTGGTTTTTACAGTTTTCA 527867 35 86.1 54 .........................T..-G.G...G CGGATTAGCAAAGCACCGCTTTGCCCGCTCGCAAGATTGAAACTCACTTAACGT 527956 36 83.3 33 .AAG.C.A.T.......................... ATAATCTTGAGGTACTTTGTAATCATGGTTTTC A [527966] 528026 36 77.8 0 ...............T..C.T....T..G.G.G.G. | ========== ====== ====== ====== ==================================== ====================================================== ================== 81 36 95.4 37 GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Left flank : CAAGTTTATTCAAGTTGTCGAATCGGTCAAAGATACGTCTGCAGACCGATTTAACGATAAGGTCGATTCGGCATTGGCGATATTTATGGGCGTTTAGTAGACAAAATTTCTTATTCTTTGTTAACCTTTTGGAGATGTTGCGATGTATATGGATCCTGTCAAACCATTTGCTTTTATGATTATTTCTTTTTTTTTGGGGGCGTTGCCATTTACGGCTTTGTTTTTTATTTGGTGGATAGTGGTGTTAGTTAATAACGTAAGTGTTGGAAAATAGGGAGGTTTTTGCTATAATAGGACTCGCTATTTTTTATATTGGCAGTCTTTAGAGACAGATTGTTAAAAGTTTTGAGCTTACTTGATGAAAGTGGTTGCGATTATATTCGCCTTGTACTGTATAAAAACAAAAATTGGTCAAAAAATCACCAACTTTTTAGTTGAATTTTGTTTGTCAAAATAAGTTTTTAACTGGTTGTTTTTATTGATAAATAAAAATAAGTGCA # Right flank : CTATTTCCATTTGTCCAAAATTCACCAAAACACCCTAAAATCCCCATTCATCTAATGAAAATCCCGCCAAATTCTGCTACTGTGTTGAGTAATTATCCCATCACTTTCAACCATTAGCATCTTGCCATGACCACCAATAACGCAGCCTACCAGTCCAATCAAACGACCAACACCGCCAATCAGCACCCCGAACAGCGAGCAAGGGACAATATCGACCGCTTGCTTGAGCAATCTGGCTGGATTGTCCAAGACATGAAGGCTTTTAACCCAACGGCAGGGCTGGCAAGTTTTCGAGCGGTGTTAAGTGAGTTAGAAAATTAAAATACATACCTATTGAAATATAAGGAAATTAGCATGACCATTATGCAACACTCAAGTAAAGCCCAAGACCGTACATTGGGCGTTTGGTATCAAAATATTGAGCAAGGCTCAGTAAAGTTACCAAGATTTCAGCGTTTTGAAGCGTGGGATAGAAGTCGTATTACCAGTTTTTTAAATAC # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-116] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 2084919-2089569 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024176.2 Moraxella osloensis strain YHS chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2084919 28 100.0 32 ............................ ATAATGGGGCATATAGCGGAACCCGATACGCT 2084979 28 100.0 32 ............................ GTGAAAAGTACGTTACCGAGGATGACGGCTTT 2085039 28 100.0 32 ............................ AATGACGAACATTGACTATCACTTGCAACAAG 2085099 28 100.0 32 ............................ ATAAGCGCGATACAACTTGGCACGTACAGGGT 2085159 28 100.0 32 ............................ CTGCTTTGATTAGCCACCATCACCGATTATCA 2085219 28 100.0 32 ............................ TTGTAGCGACTGCCAGTCATTAAAAAACTTGA 2085279 28 100.0 32 ............................ TGGAGCATGCGCTAGCAGGAGCAACCGCCAAG 2085339 28 100.0 32 ............................ CCTATCGTTGCCGCCAGTGTCCCTGCTTCAAC 2085399 28 100.0 32 ............................ CAAAGCACCAACAGCAGCAAGACCATAACCGA 2085459 28 100.0 32 ............................ GACAGATAAAGACGTTGAGGGAGTTGCAGGAC 2085519 28 100.0 32 ............................ TTTAGGTGTAAGTTTATCTTTATCTAAATTGA 2085579 28 100.0 32 ............................ ATAACGAGTAGCGGTCTCAACGTAGCTGCCAA 2085639 28 100.0 32 ............................ AATACACGGTAACAGTTTTTTTCTTTCGAGGG 2085699 28 100.0 32 ............................ AATCAAGAGCAGTTAAACCAATACCAGTAATT 2085759 28 100.0 32 ............................ GTCAAGATTAAAGCCCGCGGTAGTAATGGCAA 2085819 28 100.0 32 ............................ AAATTCATGGTCAATCGCTTGACCCTGTTTGT 2085879 28 100.0 33 ............................ AGATAATACTTTGATTACAAGCGTCCGCTGCTG 2085940 28 100.0 32 ............................ CAAGTCTGCGCGCTGACGACATCATCTATGAT 2086000 28 100.0 32 ............................ ATAAGCGGCGACCGTAGTTATCACAGCGGCGA 2086060 28 100.0 32 ............................ ATCCGCGCCGTCACAAGCAATGCGGTGATGAT 2086120 28 100.0 32 ............................ TTTACGTCCACAAGCCGATATTTTTACCCAGC 2086180 28 100.0 32 ............................ ATCCAGTGCGCAAGCTCTTCGATATCCATCGA 2086240 28 100.0 32 ............................ TGTTTCATCAGGGGTTTTACCAGCAATTAAAG 2086300 28 100.0 32 ............................ TGTCAAATCAGATGCCGAAATCTACCGAGACA 2086360 28 100.0 32 ............................ CACAGCGCGGTGAGAAATCACCCGCCACCAGC 2086420 28 100.0 32 ............................ TTGCGTGCCAAAGCGCGTGCCGAGCTTGCAAG 2086480 28 100.0 32 ............................ GCGGGCTCAAGATATACATCACTACCCTTACC 2086540 28 100.0 32 ............................ AATATAAACGACCCAAGTCGCAAAATCGGTAT 2086600 28 100.0 32 ............................ AAGCCCAACTTGCAGGGGCAACCAGTGCGGGA 2086660 28 100.0 32 ............................ AACTTTGTTGTCGTTATCAACGTGAACGCTAC 2086720 28 100.0 32 ............................ GATGTGTGCGACCAAATGGATTTAGCAGAGCT 2086780 28 100.0 32 ............................ CATCTCGGTAGTGAGCCTAATAAGCATAGTGG 2086840 28 100.0 32 ............................ TACGCCACTGGCAAACAGGGCAATACCTAACA 2086900 28 100.0 32 ............................ CCTTGCAAACCGTCTTGGGTGGTCGGCAAACT 2086960 28 100.0 32 ............................ GCCGCCGTCACGTTCTATCAGACTTCGACGCA 2087020 28 100.0 32 ............................ CCAAAAATAAGCCAATGCCTTTTTTTGACCGT 2087080 28 100.0 32 ............................ TGTTTCATCAGGGGTTTTACCAGCAATTAAAG 2087140 28 100.0 32 ............................ TGTCAAATCAGATGCCGAAATCTACCGAGACA 2087200 28 100.0 32 ............................ CACAGCGCGGTGAGAAATCACCCGCCACCAGC 2087260 28 100.0 32 ............................ TTGCGTGCCAAAGCGCGTGCCGAGCTTGCAAG 2087320 28 100.0 32 ............................ GCGGGCTCAAGATATACATCACTACCCTTACC 2087380 28 100.0 32 ............................ AATATAAACGACCCAAGTCGCAAAATCGGTAT 2087440 28 100.0 32 ............................ AAGCCCAACTTGCAGGGGCAACCAGTGCGGGA 2087500 28 100.0 32 ............................ AACTTTGTTGTCGTTATCAACGTGAACGCTAC 2087560 28 100.0 32 ............................ GATGTGTGCGACCAAATGGATTTAGCAGAGCT 2087620 28 100.0 32 ............................ CATCTCGGTAGTGAGCCTAATAAGCATAGTGG 2087680 28 100.0 33 ............................ CCTGAAAGAGCAAAGGGCACAGCCCTTTGCATT 2087741 28 100.0 32 ............................ TCACCGTCATCAATAATATTGGCGTTAATAAT 2087801 28 100.0 32 ............................ AAACTAAAAATGATGGCAGCCATTGCCACCGC 2087861 28 100.0 32 ............................ AAAGCGGACGCTCAAATACAGGAGCACCGCAA 2087921 28 100.0 32 ............................ TGTCGACGTGGGTGGTTTTACCATTCGTGAGT 2087981 28 100.0 32 ............................ TTAGAAGTCCCAGCTTTTTTTTGTGGCTGTTC 2088041 28 100.0 32 ............................ ATCAGCCTTTTTTATTATTCCTTGATTATTTC 2088101 28 100.0 32 ............................ ACGCCGCCGCCGTTGCCGGTGTATTTGGCAAG 2088161 28 100.0 32 ............................ TAGCGCATTGCGAAAAGCAGGGTTTAAGCCAG 2088221 28 100.0 32 ............................ ATGATTGTATGCTGCATCGACAAGCTGCCAAG 2088281 28 100.0 32 ............................ CAATGCCGCCCAGCACACTGAAAATCCACACT 2088341 28 100.0 33 ............................ ATAGCTGCGACTGCTGCCAGTGTCTGATTGCCA 2088402 28 100.0 32 ............................ ATATATGCTGCGCTTCGGGCTTGTCAAATGCC 2088462 28 100.0 32 ............................ AGTCACAGCAACAACAACTGCTACTACTGCCG 2088522 28 100.0 32 ............................ ATTTTCGCCATAGGTTACTTCTGTAGCAATAA 2088582 28 100.0 32 ............................ TTGCCAGTTTTTGAGTGCTGCATCGTGTCAGT 2088642 28 100.0 32 ............................ AATAAATGAGGTAGTAACCCATGTCTGACCAA 2088702 28 100.0 32 ............................ ACTATCGTTTGTCGTGAAGGTCTAAATACCTC 2088762 28 100.0 32 ............................ AGCGTCATTAGCCACTTGTTGTACGCCAGTGC 2088822 28 100.0 32 ............................ ACCAGAAAAACCAACACAGCAAGGCGAACAAC 2088882 28 100.0 32 ............................ TTGCCGTTTGATTGTCTGATTGCGCTAACTTC 2088942 28 100.0 32 ............................ TAGCCGATAACAGCGTTAATATACAAGATATC 2089002 28 100.0 32 ............................ TTCTTGATATTTAAATAATTCGATTTTTAAAT 2089062 28 100.0 32 ............................ TTTGACAATATTGTTTGTCGTGATTAAAAATT 2089122 28 100.0 32 ............................ GATTGTTAGCTTACAAAATGCCCGATATTCTT 2089182 28 100.0 32 ............................ CATGACTAAGGCTGTAAAATTTGGCATATCGA 2089242 28 100.0 32 ............................ AGCAGGTGTGCCAACTATCGGCTATGGCGCGA 2089302 28 100.0 32 ............................ TACTGCATCATCAAGGTCAAAGCAAACGGCTA 2089362 28 100.0 32 ............................ TTTGCTTTGGGTGAGCCGATTAACTTGTAAAC 2089422 28 96.4 32 ...........G................ TGTATCGTAGGGCTTACGGCTTTGCGTGTCGC 2089482 28 100.0 32 ............................ ACTTGGCAATATTAATCTAGGCAACAAAAAAG 2089542 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 78 28 100.0 32 GTTCGCCATCGCATAGATGGTTTAGAAA # Left flank : TCGCTGGGCAAAGGTATTATATAAAAGCTTGGCGGAAGGCTGTGGCTTTAAATTTACCCGCGAGGAAGGCAAAAATGCCAATGATGATATCGCCGATATCGCCAATAGCTACCTTGACCACGGGAATTATATCGCTTATGGCTATGCGGCAGTTGCATTACATGGGTTAGGTATTAGCTTTGCTCTACCGATGCTACATGGTAAAACCCGCCGTGGTGGTTTGGTGTTTGATGTAGCAGATTTGGTCAAAGATGCGATGGTGATGCCACAAGCATTTATTTCGGCAAAACTGGGGCATAATCAAAAAGAGTTTCGGATGCAACTTATCGAGATTTGCCAAGACCAAGATGTGTTAGATTATATGTTTGGCTTCGTTGTAGACACTTGCCAAAAAATTAAATAAAATCAGCTGCTTATAAAAAGCACTTTAAAACGAAGTGTCTTGACTGAATTAAAACGTATATAATTGATATCTGGGGATTTTGTCAGAAAATTCTCCA # Right flank : ACATGAGTTTGATTGATATTGTTCATGCACCCTACTAAATTTTTCTAGTATATATCTACTTTGCATTTTTTTCGTCAATATTTCTCATTTTTATACGAGATAGTCCTAATCTAAAGTTAAGGTAAGCAATTTAATATATTGAATTTTTGCTTATGTATTATTTTATTAGTATGTGGATTTAGAGTCGTACCGTGAAAACTCAAAACTTTATATAGTCCGTATAACAACTTTTGTATCTATTTTTCCAATCTCAAGACGGTTAACTAAACTAGTGTGTCAATGTCTTAAAGTCTCTAATAGCCATGTTTTTAATTTGGAGGGAATAACTTTGAAAGGATTTTTTTTAGGACATGAAGGCTATTTAAAATAAGCAATGAAAATCAAAAAAAATTCAGTTTCATCTCTTTTAAATTTGAGTGGGGGTGAAAACCTACTTGCTCAAAAATTAACCAAGGCACAATTTGGGCACAAAATGGGCACACAAGATTTTTAAGCGATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGCCATCGCATAGATGGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //