Array 1 12195-13783 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBEM01000006.1 Ligilactobacillus salivarius strain DSM 20554 DSM20554_contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 12195 36 100.0 36 .................................... TCACTTGATATCCACCTGGTGTTTTCATGATTATTG 12267 36 100.0 39 .................................... CCGTGCCGTTATCATGATGTTTGGGCTGGCTGGAATGAG 12342 36 100.0 39 .................................... TTGTAACTCTTCTATAGTTTGATAATTTTGTTCACGTGT 12417 36 100.0 36 .................................... CAGGTAGCAGCCTAAACCACCTATATTCAGTTGTCA 12489 36 100.0 36 .................................... CTGAAATACTTTGAATTAGTCGATTGATAACTTTAT 12561 36 100.0 36 .................................... TCATAATTAATTTACCTCTATTCTTATTAATTCTTT 12633 36 100.0 37 .................................... TGAAGATAAAATTTAAAAATCTTCAAAAAAAATACTT 12706 36 100.0 38 .................................... TTATAGTGTTACGGCTACCACTCTCAAGGAAGCTAACC 12780 36 100.0 33 .................................... GCAAAGGGGTTTGTTCTTTGAAAACTAGATATT 12849 36 100.0 36 .................................... TGTTGAAAAACTTTAAAGCGTAGTCGATTTTGTACT 12921 36 100.0 40 .................................... GGTCTGTTGCTTGTTCGTATATTTCATCAATGTACCAATT 12997 36 100.0 41 .................................... AAGTCTAAAATAGTTTGATAATTTTGTTCGCTTGTATTCAT 13074 36 100.0 37 .................................... CGAAGCGGGATATAACAATATATTTATACTCTTGAGG 13147 36 100.0 39 .................................... CCTACTTCCGAGATTTTATTAAATTTTCCAAAGAACGCC 13222 36 100.0 39 .................................... AGCTTTATCTGTTCCTAACGCCTTTAATGCTTTATTGAA 13297 36 100.0 36 .................................... AGTTAGATAATCGAATGTGTCTAGGTCATCAAGGAT 13369 36 100.0 38 .................................... GAAACTTCGTTCGTGCAATAGTTCAAATTGTGTATTCA 13443 36 100.0 41 .................................... ACTCCTTTGGTTTTGCCTTGCTCCACATCCATACGCTATCT 13520 36 97.2 37 .................A.................. TGGCTTTATTTTAGGTAGCAGCCTAGACTACCTATAT 13593 36 100.0 42 .................................... TTCGTTCATTAGGTTTATCAATCTTTCATCAAATTTCATTTT 13671 36 97.2 40 .....................G.............. CCTGCTGTTGTTAGTTCGATCATTTTTCTTCATCCTTTCG 13747 35 88.9 0 ............................-....TCT | TT [13777] ========== ====== ====== ====== ==================================== ========================================== ================== 22 36 99.2 38 AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Left flank : CAGGATTGAAATTACCGACTTTCATTGAGGAAGGAAGATAAGTATGATGCTATTAGTATGTTTTGATTTACCAAGAGACACGAAAGAGAATAGAAAAGAAGCAACTAAATATCATAAGAAATTAGTAGAATTAGGTTTCACAATGAAGCAATTTAGTGTGTATGAAAGAGAAGTAAGACAAAATTCTACTAGAGATAGAGTAATTAAAGTGTTAAAAGATAGATTACCTAAATCAGGTGCAATTACTTTATATTTACTTCCTAACGAAGTAAATGATTCACAAATAACGATTTTAGGAAGTGAGTCTATAAAGAAAACTGTTAGGAAACCTCAATTTATTGTGTTATAATACACTTACACTGCTGTAAGAAACAGTAGTACAAATAAAAACTTGTCTGAATTTTGACCAAATAATACTTATTAATTTAACCTATTGCCCGTTTAGGGTACCATTAAAAATGTCAATAATTGTTGATATATCAACTAATTGATCAAAGAGT # Right flank : TAATTAAAGTGATAAGAAGGAGAGTAAAAGTTAGAAAAAATAATATATAATATAGGTAATTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCATGTATTGGTGATACAGATCCTATAAGAAATAGGCATGATGGAGCTTTATTGCATTTAGCAAGAGTATTTCGCCCTGAAAAAATATTATTAATATACTCTGAGCGTGCTTTATTGAAAGAGAATAATATCTTATTAGCGTTAAATTCTATAGAAGGATATAGTCCTGTAATAAAAAAAGATGAGAGACTTATTTCCGATAGTGAAGTATTTATTTTCGACAAAATATATGAAATATTAAATAATGTAGTCTTAAAGTATTCTAGAGATAATGAGGATTTAATTTTGAATTTATCTAGTGGAACTCCACAAATGAAGTCAGCTTTATTTACTATTAATAGATTGAATGATATTAATGTTAGAGCCTATCAAGTAATAACACCTAGTCATTCTTCAAATGAAGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //