Array 1 269192-270257 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIDU01000041.1 Escherichia coli strain 64-L72-A entry41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 269192 29 96.6 32 ............................T TCATCTTCTTCCTCCCAGCGCTGCCGCTCCGC 269253 29 100.0 32 ............................. TTGAACGATTTTGACCTGCGCCGTTTTGAGTC 269314 29 100.0 32 ............................. CTGACGCAACGATTGACCGTGCCGCCGGGTTG 269375 29 100.0 32 ............................. CCGCCGTTATATGGAGCGATTCCGGTTTGGTA 269436 29 100.0 32 ............................. GGGTGGCGGTGGTGCTGTAATTCACACCGGTA 269497 29 100.0 32 ............................. TATTCCCCCAGTCACCCCCGCCACCAAAATCA 269558 29 100.0 32 ............................. ATTTTTCAGACTCATCAAAATAATCCTTTAAT 269619 29 100.0 32 ............................. CGAATTTTGCACACTACGTCGCTGAGGGTAAA 269680 29 100.0 32 ............................. CATTGCCTTTGCAGCGTCTTTCCGATCATTCA 269741 29 100.0 32 ............................. AACGTGAGATACGCCTCCCAGCGGCGCTCGGT 269802 29 100.0 32 ............................. CCGTCAAACAGTATCACCGCGTTAACGCCCGC 269863 29 100.0 32 ............................. CCACACACGTCGAGCTGGTGGGGGTTAATGCT 269924 29 100.0 32 ............................. ACACCTCTACTGACGTTCCTGAACAAGAAGAT 269985 29 100.0 32 ............................. GCCAGGAATGCAGCATTTTGCATGGGAAATGA 270046 29 100.0 32 ............................. CTGGGCGAGGGAGAAACGCCAGCGGAGCAGTA 270107 29 100.0 32 ............................. GGATCACAAGGGCGGCTATCAGGGTGGACGGA 270168 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 270229 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.6 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 295957-297205 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIDU01000041.1 Escherichia coli strain 64-L72-A entry41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 295957 29 100.0 32 ............................. CGGGGTCATAACTGGTTTTAGCCTGCACTGCA 296018 29 100.0 32 ............................. ACGACGACGGCAGCGCAGCAAACTGGCACGGG 296079 29 100.0 32 ............................. TAACGGCGAGGGAGTGAGCGAGGTATTTATTA 296140 29 100.0 32 ............................. TTACAGCGCGTTGCGAAACGCTGCGGCGATGT 296201 29 100.0 32 ............................. CAAATATATTTTGCGTTAATTATTCGAGGTAA 296262 29 100.0 32 ............................. GCAAAATATTCAATCACCCCACTGGGTAAACC 296323 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 296384 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 296445 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 296506 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 296567 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 296628 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 296689 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 296750 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 296811 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 296872 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 296933 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 296994 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 297055 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 297116 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 297177 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCTTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //