Array 1 22491-19959 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWFK01000006.1 Bifidobacterium animalis subsp. animalis MCC 0483 M0483_006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 22490 29 100.0 32 ............................. GCCCCGCAGGCGCGGGGATGACCCGGTAGTGA 22429 29 100.0 32 ............................. GCTCTGGACGGGCGAGAAGCTGAGCAGCCCGC 22368 29 100.0 32 ............................. CCCCAGCTGCTGGTGATCATCGTGCCGTTGCC 22307 29 100.0 32 ............................. CCCTGAATCGACACGTCGAACACCTCACCCGG 22246 29 96.6 32 ............................G TACGGCAGGTCGAACGGCAGTTCACCCCCCGG 22185 29 100.0 32 ............................. ACGGGCGTGTTCCCTGCCGGTACGACGGTGGA 22124 29 100.0 32 ............................. TCAGACAGTCTCACTGGACCTTTTGAGCCATT 22063 29 100.0 32 ............................. GCCATCAACGAGCTGGCTAAAGCCGGCATGAG 22002 29 100.0 32 ............................. AGCAGGCATACGAGGACCTGCCATAACAGCAG 21941 29 100.0 32 ............................. ATCAGACTCGACTTGTTCGAACGTGGACGGCT 21880 29 100.0 33 ............................. GATGATGGCACACCAGCGAATATCCGTTGGTTC 21818 29 100.0 32 ............................. AGGCGCAGCCTGGTTGTCGTTCCCCTGCCTAT 21757 29 100.0 32 ............................. GCCGCAACCTGTGGCGGATGACGTATGCGGAC 21696 29 100.0 32 ............................. TGCACGGTGACAGGGCCGGTGGACGGTCACTA 21635 29 100.0 32 ............................. ACCCTGCCGTCGAAGAAATCGGCGGTCGCGAG 21574 29 100.0 32 ............................. GCGAAAGCATTCGAAAACGCATACCCCCCGGC 21513 29 100.0 32 ............................. GGAATACATGGTCAATGCTCGCATTCAAACCG 21452 29 100.0 32 ............................. GCCGCCTCGGTGACGGGCTGATTCTTCCACCG 21391 29 100.0 32 ............................. GTCACCTCGACCCTGCCGGTCTCATCACCGCT 21330 29 100.0 32 ............................. GACGTTGTCCGACGACATACAATGCTTTCGCC 21269 29 96.6 32 ............................T GGATGACGGGCACGGTGCCCAGATTGTGGTCG 21208 29 100.0 32 ............................. ACACCTGCACATGGTGGACGCTCGACGAGATG 21147 29 100.0 32 ............................. GGGCGTGTCGTATGAGGATCCACGGAGCGATA 21086 29 100.0 32 ............................. GCCGACGAAGCCATGCTCAACCTACGCCAAGG 21025 29 100.0 32 ............................. GTGCCACCCGTGAAGACGCCACCTTCGACCGA 20964 29 100.0 32 ............................. GCATTCGCGTCGGACGCGGTGTCGCCGTTGAT 20903 29 100.0 32 ............................. GGTGAATTGCGCCGGCAGTCTGGCTGGGGATG 20842 29 100.0 32 ............................. CTCAAAAACAGTGACGGCTCTGCGGAGAATAT 20781 29 100.0 32 ............................. ACCTGCTCGTTCCACCGCGAACCGTTCCACAC 20720 29 100.0 32 ............................. CGGCGACACACAGCTAAGCCTGGCCTCCGCGG 20659 29 100.0 32 ............................. CAATGGCGCAGGGCAATAGTCTCTATCTGCTG 20598 29 100.0 32 ............................. CCGCAGGTGATCGGGATGCCGCCACGTGCCTG 20537 29 100.0 32 ............................. CGTGAATGACTGCTGGACGCGGCCGGGGTATT 20476 29 100.0 32 ............................. TCACCCAACACTACGATTTCTGCATGGGCAAC 20415 29 96.6 32 ..........................T.. TACACCGAGATAACGCAGGCCGCCGGCAATCT 20354 29 93.1 32 ...........G....T............ CCGGCCGCCCCGGAGGTGGCGCAGAAGATACG 20293 29 96.6 32 ................T............ ACGGCCGACAAGATCAGCGGACGACCCGTGAC 20232 29 93.1 32 ..............TA............. GCCTACGGCATCCCACCCGAACTACTCGGCAT 20171 29 93.1 32 ...........G....T............ GATGCGCAGTTGCAGGCGCTCGTGGCGTCAGC 20110 29 93.1 32 ..........T...............T.. GACAACAACGCCTGCAAGAGGCCGGACTGAAT 20049 29 89.7 32 A......A......T.............. CAGGCCGGGTACCTCCATCCACTGCAAAACGG G [20041] 19987 29 89.7 0 ........T...G.............T.. | ========== ====== ====== ====== ============================= ================================= ================== 42 29 98.5 32 GTGTTCCCCGCAAGCGCGGGGATGATCCC # Left flank : CGCTAGGGGACGAGTGGAATGAGGAACCATGGTAGTCATCGTTCTGACGGCATGCCCTGCAGGATTGCGCGGTGACGTGAGCAGATGGTTATTGGAGATATCTCCCGGCGTCTTTGTGGGACGTATCAGTGCTCGCGTACGTGAGAAGTTGTGGGAGCGCATCGTCGACACCCTCAAAGACGGCAGGGCCATTATGGTATTCTCAGCTAGGAACGAGCAGCACCTTGATTTTCGCGTATTCAGATCCGATTGGCAGCCAGTGGATTGCGACGGATTGCAATTGATCAAGCATCCAAACGAGGAGAAACGCGAGACTTACGCGGGGACGAAGCGGCATGGGTGGAGCAACGCTGCCAAATACAGGCGTGCACGCAAATACCGTGGATAACAGCCGTGCGTTTCGGCAAGTGTTTCTTCTTTTAGACATTGTAGAAAAGAGAAGTGAATAAAAACAGACTTCCTTCTTTTCTGATATGTTGAGATTATTGGGATTTCTTAGG # Right flank : TGACTAGTGTATTTTGTCAAATCGGCGTTTTGGCTTGGGTACCGGGCTGCGTTGCCGCTGTCTCGATTATGTTGATTATGCCATGAGTATGTTGATTATGCCATGAGGTCTCTAGTTCTTGCTGGTGTCGGCGCATGTTTGTGCCATTCGGTCTTGACGCATTCATTCCAGTATCCGGCCAGATAGTCGTTGAGGTCGTTGATGAACTCGTCGATGCTGTCGTCTTGGTGGTTCCGGTTGTGGTAGGAGAGGGATGAATTTTGTAGGACGAGTATCAGGGTATTGCTCCGATTTTGGGGATTGAAACATCCATGGTGATGCCGAGGTAGTGGCTAGATGTAATTCCAATTATCCATCTGTTGTTAGGTCTAACGATGGGGAGAATAGGAGCGACCATTGTTTGTATTACTACAATGATTTGGGTCCACAAGGAATACAGAGATGGCTTTATCTCAGGAAGCATTGTGAGCAGGGTATGAATGCTCTGTACTATCTAGCCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAAGCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAAGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //