Array 1 21352-19908 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMGR01000015.1 Paenibacillus abyssi strain CGMCC 1.12987 sequence15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =============================================================== ================== 21351 32 100.0 34 ................................ GTGTTTACGCAATTACAGGCGGCTGACGGCAGTT 21285 32 100.0 34 ................................ CCCTTTAGTTGTGTACTACGGAATAATCCGCGCA 21219 32 100.0 34 ................................ TTTTCGACAGTATCGGAGCCGAAAGTCAATTGGC 21153 32 100.0 34 ................................ ATCACGGGTGAATTTCCTTGACTCTATGAATTGA 21087 32 100.0 34 ................................ ATCACGGGTGAATTTCCTTGACTCTATGAATTGA 21021 32 100.0 34 ................................ CTCCGTGTACACTTACAGCTGCTCTGGCGATCTC 20955 32 100.0 34 ................................ GTCTTCTGATCCGGCGAAGTCCGGGACATTTCTG 20889 32 100.0 34 ................................ TTCCAACGCTTCAATGCAGCCTCCAAAAGCTCTA 20823 32 100.0 33 ................................ CACTTGGCAAACGCACTTTATTTATCGCCACAT 20758 32 100.0 34 ................................ CCCAACGTCGAAGTTCTTTAGGACTGCGATAAAA 20692 32 100.0 34 ................................ TTAATAAGCAACTCATAAGGAATTTCGAGCGCCG 20626 32 100.0 34 ................................ TACTACGCCAAGATTGATTTGACAGCCAAGACAG 20560 32 100.0 34 ................................ ATTTCCAGCTCCGTCAACCGCTGATGCTTGAAAA 20494 32 100.0 34 ................................ TCGTCCGAAAGGAAATATTTCTCTGGCACGCTCT 20428 32 100.0 34 ................................ AACGATAGGGGGAGCTTCACTCTTCCAGCGGGGA 20362 32 100.0 34 ................................ GAGACTATACACCTGAAACACAACGAATCTTAAA 20296 32 100.0 33 ................................ CAGCTTCCGAACCAGCCAATCTTCTGACCTCGC 20231 32 100.0 34 ................................ ATTTCGCTGTTGACGGATCGCCTGTCCGAGATTA 20165 32 100.0 33 ................................ CCCGCACTTCGTCATAATACTCCTTGGCTGCTG 20100 32 96.9 34 .............T.................. CTCCAAAGATGGCAAAGCCATTGACATATATGAC 20034 32 100.0 63 ................................ CTTGAAAGCGCCGGCACGATCCAACACAACAAGCGCACGCCGTAACTGGAGCGCCGATTGACG 19939 32 93.8 0 ............................C..T | ========== ====== ====== ====== ================================ =============================================================== ================== 22 32 99.6 35 GTCGCATCCTACGCGGATGCGTGGATTGAAAG # Left flank : TAGATGAGTACCCGCCTTTCTTATGGAAGTAGGTGATAAGTTTTGTTGGTATTGGTTACCTATGATGTTAGTACGAGCAGTAGTGAAGGACAAAGAAGACTGCGGCAGGTTTCAAAAGTATGTCAAAGTTACGGCCAGCGTGTTCAAAATTCAGTGTTTGAGTGCGTTGTCGACGCTGCTCAATTTACTGTTTTAAAATTAAAGCTCCTTGACATTATTGATCAAGAACAAGATAGCCTGAGATTCTATCAGTTGGGCAATAATTACAAGAATAAGGTAGAACATATCGGTGTGAAAGAGTCAATTGATTTAGAAGGTCCATTGATTATGTAGTGCGAATGTGAAGCGCACATGAATTTCCGGGGACATTCGCACCGGAAAACCAGTTGAAAATGTAATCTTATTACACTTTTATCCATGCTATTTCAGAAGTTTATTAATTTACGCGTATTTTTGATCATAAATATGGAGTTTCGGGCATATTTGGATCAAAAATCGCC # Right flank : AACTGGAGACCTCGTATTTGAGGAGAAGACCTGATCGCATCCTATACGAAAGTAAGTGTACTCAGCTACTTTCTTTCGTCGCATTGATCGGATGCAATCTTGTTAATATAAGAAAGCTGCATTTCAATCTTGAGCGGTGGGCTTTCCCACTATAAAGCATTTGTAATAGGGACTGTCACATAAGGTACACACTTAGATTAGCTTAGAATTCACCGTGAAACTAAACAGATCCATCCAAAGGACGGCGAAGCTGTTTCTGCTTGGTCTAACGAAACATGGGCATTACATTTGGTTCGGTGATGTCCCGTACATGAAATTGGAGGAGTGTTATGACGATCCTCGATCCGATTGCTTCTAGAAGGGGGAATATCGTGTGGCGTTAAGCGCACGTAGGCGTTTATTCAAATGCAGTATCGGGAGGTATGCGTTTTCGATTGACGGTGATCAAGACAAGGCGCTGCCAAATTTTGCGGCGGAAGATTTAGATCTATGATATGGGG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.20,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 234881-233270 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMGR01000009.1 Paenibacillus abyssi strain CGMCC 1.12987 sequence09, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 234880 32 100.0 34 ................................ TTCCTCCTTATATGGGATGTTTAAACGATCTCTG 234814 32 100.0 33 ................................ CTCGAGTTGCTCGTCTGTCAATTGATTTAAAGC 234749 32 100.0 34 ................................ ATCAAGCGATCGATGAAATAGAGGTTGTTGAATG 234683 32 100.0 33 ................................ AAAAAGTCGGCGAAAGACTCCAAGAAGACAATC 234618 32 100.0 34 ................................ ATCGCAACAATGTTGTAGTAGACAGGGTTTCCGT 234552 32 100.0 33 ................................ TTCTCAAGCAGCTTGTCTAGCTTGTCAGACAAC 234487 32 100.0 34 ................................ TAGAATGGGGGCGGATATCGATGCAACTAAAGGA 234421 32 100.0 35 ................................ AGATGAACATGGGGTGGTTACTTGGACAAGCAGGA 234354 32 100.0 34 ................................ CACTACGTGTATAATAGCCGATGAATTGGCGTAG 234288 32 100.0 34 ................................ TGTGATGGCGGCAAAAGCCGGTAACATCAATGGC 234222 32 100.0 33 ................................ CATCTGCTTCTAACCTCTCTTTCGTTAATGTGC 234157 32 100.0 35 ................................ AAAAAGCCCTCATGATTCTTCTGTAAAATGGGTAC 234090 32 100.0 34 ................................ CCAAATGTCCAGCATGTATCGGATGTTAAACAAG 234024 32 96.9 34 ................A............... CCAAATGTCCAGCATGTATCGGATGTTAAACAAG 233958 32 96.9 33 ................A............... TTCCGGCTGTCTTAACCCCTGACTCGGCAAATA 233893 32 96.9 34 ................A............... ATCCAAGTGTGAGGAAGCAACCAGAACCATAAAA 233827 32 96.9 34 ................A............... CTCTCGACTGCATGACCGCATACATCGCATTTGC 233761 32 96.9 34 ................A............... CTCTTTCTTGGTGGTAACCTGTATCGGTTTGGCC 233695 32 93.8 34 ................A..T............ ATCTTGTCGAACTTGACCATGTAGTTATCGAACA 233629 32 96.9 33 ................A............... CTCCGCATCGGTATAGCGAAAATAGCGCGCCGC 233564 32 93.8 33 ....T...........A............... ATTCGGATCACTTACGGTTCGACCACCGTTTAA 233499 32 96.9 34 ................A............... ACTCATGGAGCTGCTTGAAGAATGGAGCATCGCA 233433 32 96.9 35 ................A............... CATCTGCGTTTTTATCTATGATCAAATGCCGCATT 233366 32 90.6 33 ...A........A...A............... TTGCTCACTCTCTAACTGACTCGTCAAATAACT 233301 32 96.9 0 ................A............... | ========== ====== ====== ====== ================================ =================================== ================== 25 32 98.0 34 GTCGCATCCTACGCGGTTGCGTGGATTGAAAT # Left flank : TAATCGCGGACGTATGCGATGGATCGGATATTTATCACTTCAGTAAATATGACGTTCTTGAATACGATAAGACGTATGCGTACTTTACGGATGCGCATTGGGCGCATGATACTTGTTATTAGCCTAATGATCAGTAATTAATAGTTTTCTTATGATCAATGAAGTGGGAAAATAGAGAATTTTTTGAAAAAAGGGAATGCTGCTGTTATCATGAGGATGAGGAAAAATTATATATACAAATTTAGAGATTGAGCACATTGACGCCGCCGTTGAATTTACAAGTAAGCCTTATATTAAAAAGGTTATTTGATTTTTGGTAGTGCGAATATACGGTGCGAATGTGAAGCGCACATGATTTCCCGGGAACATCCGCACCATAAAATTGTTATAAAATGTAAATAAAATCTTTGTTTTTTCTTTATATTGTTTCGATATTTTTTGTTTGCGCGTATTTTTGAACCGAAGCATGACATTTCGATATGTTTGAGTCAAAAATCGCT # Right flank : TCTTTGTCGTGTATTCTTTAGAACAATTCTGCAGACATGCATACTTGAACAATTGGATGTAACCTTTCTCCCACTAAGTGCGTCTGAGACACTGAATAGCGGTAACAACAAGATATAAACAAGACATTTCAACGCAGGGGGAGGAAGGAACCATGAAAAAACGTAAATGGATGATTATGATTACAGCAGCCGGCTTGATCGCAACGACGACGGCGGTAGGTGCAAATGGTTTAATGAAAAAAGTGACGGGCTTTCTCGATAATGATGTTATGGTATCCATCAATGGCACAGATACAACGATTCAGCCGGTTTATATTGACGGAAAGGCGTATTTTCCGGCCAGGGATACGGCTAACGCACTCGGTTATAGCTTGAATTGGAGCAGGGACCAAATTGAACTGGTAGAAAAGGAATCGGAAATGGAGGAGTTCTTGCAAACTTCAGGTGTCATCGTCAGTGTTGAGCCAATCGATGATCGATACCGGCTTGAAGTGCTCGGT # Questionable array : NO Score: 8.98 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGTTGCGTGGATTGAAAT # Alternate repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.20,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //