Array 1 183597-182506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKP010000005.1 Blautia marasmi strain DFI.6.18 EOIHOHJG_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 183596 32 96.9 34 ............A................... TATTTTCACCCAACTATAAACCAGCGGATCTCCG 183530 32 96.9 34 ............A................... CACCACGCGGTGCTTTATGTGCACCCTGCGCCGC 183464 32 100.0 34 ................................ ATGGGATACCAGACCTTTACAGCAGTGAACAGCT 183398 32 100.0 34 ................................ ATTACATAATTTTCAGCGGCCGTTCCATCCGCCA 183332 32 100.0 36 ................................ TTGACGTATCCGGATACAGTTGCCTTTGACAGCACG 183264 32 100.0 32 ................................ AGAGTGTTGGGAAAAGGGCCATATCAATTACA 183200 32 100.0 35 ................................ AATAAATCATCAAACGAAGGAGGAGTCTCTCCCTC 183133 32 100.0 35 ................................ GCATTAACACAATTTGATATCGCTGATGCTTCATC 183066 32 100.0 34 ................................ AGGCCAAATCAGTACCATAATGAATATCAAAAAC 183000 32 100.0 34 ................................ ACTTTTGGTTTTGGCTCAACAAGGTTCCTGGACC 182934 32 100.0 34 ................................ ATGTCAGTCGAAACTTTTGCAACAACATCTCCGT 182868 32 100.0 34 ................................ GACCGCATGATAGACCGTCAAATCCGGTCGCTTA 182802 32 100.0 34 ................................ TGAAGATGATCAGGCAATACAAGTGATGGATTTT 182736 32 100.0 37 ................................ CTATAATGTACTTACGGGCTTGCCGGTCCGAGTACAT 182667 32 100.0 33 ................................ GAAAATCACGATGCCTACTTATTATATAGTGCG 182602 32 96.9 33 .......................A........ ATGCAACATCTGCTTCTAATCTTGGACAATTAC 182537 32 78.1 0 ......A......A..C.A..CA...A..... | ========== ====== ====== ====== ================================ ===================================== ================== 17 32 98.2 34 GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Left flank : GAATAAACTGCTTTCTCGTGAGACTTTGGAGGCGTATTTTCTGGAGATTGAGAAGAAAATTAAGAATTATACGGAAAATCTGGAGGATGATATGCTGCTTTTGAAACCGGAAGGATGTAAGTATACGAGATTTACACTTATACTGGCACAGCACAGGCATCTGCATACGCATATGGGAATGATTATGGGCGTTATAACAGCAGAGACAGGCCTTTGGCCCAGAGTCCTGGGACTGGAAGGTAAATTCCCGGATGGGGAATATGAGAAATATTTTTGAGGCGAAGATGCTTTTCTGGAATAATTGGATTAGGTGTGTTATAATGATATAGTGCTTTGGTGGTGCGAAACGTAAGTGGACATTAATTTCTTAGGGGATTCGCACTGGAAAAGGCGCATTGTGATAGGGGGATTGGTGGAGGAATGGGGTGGAGAATATAAAATATTGGTTGATTTGTATAAGGAAATGTGTGGGATATAGATAAAAATTGGTAATAATTGCT # Right flank : GCTTGTAGGAATACAACCACAGTTTTAGGTATTGTCTTTAGCTTCACACCGAAGGCAGTCACAATAGTATTAACACTAAATACACCGGACAAAATTCGTACCTTGAAATTAACGTCCACTTAAATTAGAATCAAGACATGATCACCTACCATTTATTCAACATTTTATATTTACGTTTAATAAAGACATAAAGATAATAATCAGCACTGCAAATTCAAATTTTTATCACATTTATGCATAAAAATCATCTTGCAAATGATTCCCCAACAATAATACATCCCAGGAGGTTTACAGCGTTATAACGTGACCGGAATCTGTATACCAGAGAAACATTATATGGTAGACATATCACAAAAAGTAAAACAAATTGTAGAAGAATACATTGAACCAGGGTATTATTTTGCAATTAACAGAGGCAGACAATACGGGAAAACCACAACGCTGTATCAGTTAGAAAAATATTTGCAGGATCAGTACATGATTATCAGTATCAGTTTTGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 1 32525-32819 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKP010000004.1 Blautia marasmi strain DFI.6.18 EOIHOHJG_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 32525 32 96.9 33 ...........T.................... TGTCCTCCTAAAATTCATTTCCGTCTTTATCTC 32590 32 100.0 34 ................................ ATCCCAGGCTGTAAGCTCTACAATATATGTCCCG 32656 32 100.0 34 ................................ ACCGGGGCGTGATCGGTTTACGGGTGACCGGCCT 32722 32 93.8 34 .......................C......G. AGGTTGACGTTAAAGACACCGGCATTGGAACCGT 32788 32 87.5 0 ...T..................A......GT. | ========== ====== ====== ====== ================================ ================================== ================== 5 32 95.6 34 ATCGCTGCCTGCGCGGTGGCGTGGATTGAAAT # Left flank : AAGAATCACCCCGCCCAGAAAAAGAAAAAACAGGTGATTTCTGAGTTCGGGCAGAAAGACAGCAAATGCCACTGCCCCGAAACCATAAGCCGGACAATAGGGGCCGAATAAAAAACCTACGTCAATGAACCGATGCTCCCTGACCGCCGCAACCGACGTACCGATTGTCCAGCCAATGAAAGAATAGAGTAAGTAAAACCATAGAAGTTGGTATAGTGTATAGTTCAAGTTATGCCTCCTTTTGGGTGATGCCGGATGATGAGGGTTTTAGTATACCATATACGCGGGGGGAAGGGATGTCAAGTGTAAGTGTAGGCAGAATTTCCGGTGCGGATTGAGAGGGAGCATGGATTTATCGGGAGATTCGCACTTGTAGTGGGACTGAAAATGGGAAGAAGGGGTGGTGGGGAGTGAGAGGAATCTGTGGAAATTAATTGTAAATATGAGAATAATATGATATTATATACAAGATGTAGTGAGGATGTTTGTGTATTTTTGCT # Right flank : TAAACCTGACACCCCGGTGCCGATGTCCATATATGATCGCCCCTACGGCGAAATACAATCAAATATCCTACACTACATTAACTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACAGTCCGCCAGACCGCCAGGGAGTTCAAGGTGAGCAAGAGTACAGTTCACAAGGACGTAACCGAGCGTCTGCTGCAGCTTAATCCTTCACTGGCAAAGTGTGCCCGCAAGGTCCTTGACGTGAACAAGCAGGAGCGTCATATCCGGGGCGGAATGGCTACCCGGGAAAAATATCTGCACAAGGTGCAAAATTAACGAAAGAGACTCTTGTTTTGACAAAAATATGGGCGTATAATTGTTCCTATCAAAATACAAAAGCTTATTGTGAGGGGAAAACAAAT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:0, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCTGCCTGCGCGGTGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 76338-77848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKP010000014.1 Blautia marasmi strain DFI.6.18 EOIHOHJG_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 76338 33 100.0 36 ................................. AAAATTGATCACATTGTAGGTTCCCAGATATCCCAG 76407 33 100.0 34 ................................. CTTCGCGGTGGACAATGAGCTGATAGGACATATT 76474 33 100.0 33 ................................. TCCTTTGGTTTTCAGGTTTGCTGGGATATTGAC 76540 33 100.0 33 ................................. AACCGGATCACATCCGGTCATAAAAACACGGTG 76606 33 100.0 34 ................................. CTCTTCCGCGTACTGTACAGCAGGTAACTCTGCC 76673 33 100.0 35 ................................. TACTACCATGCAATCCCAGTATCCGATACGGCCCG 76741 33 100.0 34 ................................. CCGAATTTGTCTATCATGAAACTATCCACATGGC 76808 33 100.0 34 ................................. AATCTCTGTCAATCAGACCACATCCTTAACCATT 76875 33 100.0 34 ................................. TTACAGATGACGGAGCGTTGGGAGAATATAAAAC 76942 33 100.0 34 ................................. AAAGCTGCAGGAACCCGATCAAGCTCCGCAGCAT 77009 33 100.0 35 ................................. AGAACTGGATATTGATTATGTGCCCGGCATTGCGC 77077 33 100.0 34 ................................. TACAGTAAGCAGGATTATGTTAATTATTACAATC 77144 33 100.0 33 ................................. ATATGCCGATATATATGAGCTTGTAGACAAAGA 77210 33 100.0 33 ................................. ATCTTCTTGGTCAAAAATCTCCTCAAATACATC 77276 33 100.0 37 ................................. AAGGTGGGGGCGGTCACGAATCCGAATCCGGTATCTG 77346 33 100.0 36 ................................. TGTATTCCCACGGAGGACCTGACAGATGACCCTGAC 77415 33 100.0 33 ................................. GTAAGTACCGTCTTCAGTTGTTACAAGCTTCGG 77481 33 100.0 33 ................................. CTATAAGTTCCATTATCAATGTTAGCAATAATG 77547 33 100.0 35 ................................. GATTTCGCCTATCCCTCTTAAAAATACTCTCATTT 77615 33 100.0 33 ................................. ATATAAACAATTGAAGCGCATCCAATAATTTTA 77681 33 100.0 35 ................................. TGGTATGAAGTCTTTTTCAAGACCGATTCTCATTG 77749 33 97.0 34 .........T....................... ATGACACCCAGACAAAGAATACGGCCGGGGAAAC 77816 33 75.8 0 ...C........A..A...A...AA.C.....C | ========== ====== ====== ====== ================================= ===================================== ================== 23 33 98.8 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : ATCCAAAACCCCAACCGCCGACTGACAACAATAAAGACAAAGGCAAAAATCCAAGCAGACCATCCGGCGGTGGAAGCCAGAAAGGAACCTCTTCTGCAAAAACAGGGGATGAGACACCAATCGGCATGTTTGCAGGTTTGGGCGCCGTTGCACTGATTGCTATATTTGCCTGCACACTCAGTATCTTGAGAAAAAGAAAAAGGTCATAATCAAAAACAGAACAGCATAAAACGCAGTTCTTTTATCCCCCGGAAGATGACAAAAGTTCATCTGCCGGGGCCGGGGAAAATCAGGAAGGAGAAAGTACCCTTTTTTAAAAAGAAAATATAATTTCAATAGGTGCGAATCCCAAGTGGACATAAAATTCCAGGGAGATTCGCACCTATATTTTTATGGAAAAAGGAGGATAATTATGTTAAAATAAAAAATAAGGAATTATATATGTGTAATATTTGTGCAAGATGTTCTAAAACGATGTTGGTATTTTGGGAGATTTTGCT # Right flank : CAGCAATAAAACCAAATACCCAACAAAGGAAAAATCCACTCTTTACAAATCAAGTGCAGAATAGAGCCATTTATATCAGCGCTGCATTTGGAGATACCGTAGTTGTTCACAAACAACCAATCTCCCGATTACGCAAATCCCCTTGACCATCATGACAAAACCCATTGACACCAGCAAAAAATCTAACTATAATAATGGCACAGTAACCCGGTAATTTACCTACAGCGTTGGTCGTTGGGCTGGCGCTGTTTTGTTATGCAGGATTTATTCTTGGATTTGGGAGAATATAACTGTCGGAGGATGAACATGGCAACAATCAAGGAAATTGCAAAGGCATGTAACGTCTCAATCTCAACGGTTTCTAATATACTAAATGGCAAGGAAAAGGCCAGACAGGAGACAAAGGAACTGGTTTTGCAGAAAGCAAAAGAGATGAATTACGTGCCAAATTATATGGCAAAAAATCTGAAACAAAAAAATACCAAAACAATCGGAATCAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 71908-74163 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKP010000016.1 Blautia marasmi strain DFI.6.18 EOIHOHJG_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 71908 32 100.0 36 ................................ CTGCAGCCGCTGTCGCGTCCTCTGCGGCCCGCTGCG 71976 32 100.0 33 ................................ AATGTCAGAGGGGCAGGTCAATGCTACCAGTTT 72041 32 100.0 34 ................................ TGTAATATTCCGTATGCGGCCCCAGTCCATCTTA 72107 32 100.0 33 ................................ CGATCACGCTTTGTGCATGAGTGCTTGCAAACA 72172 32 100.0 34 ................................ TATACAATGAATTAGAGATGGAAGGGGGGAGTTG 72238 32 100.0 33 ................................ CCGGTTTTTACCATCCACTTTTTTTCTCATCAG 72303 32 100.0 22 ................................ TTGTTAGTTGCCAGGTGTTTGC Deletion [72357] 72357 32 100.0 33 ................................ ATCACACAGAGGCTCATGCAGTAGGAATGACGG 72422 32 100.0 35 ................................ CGCAGAGTATGCAGGAGCAGATAACATCTGCCTTC 72489 32 100.0 33 ................................ ACTATGGTCTGCTCAGATATAAGAGCAGGCCGC 72554 32 100.0 35 ................................ ACTCTCCGCTTAAAAAGTTCTATCAGGACACCCTG 72621 32 100.0 35 ................................ AATAAAATCATACCTGATATATTATCTATTGTTTT 72688 32 100.0 33 ................................ CTGTGAACTTTGCAGGAGTGGAGATCAGACCGG 72753 32 100.0 34 ................................ CCGCCAAGGCACCGATATACTTAAAACTTTCTCC 72819 32 100.0 34 ................................ AACATTTATTACAAACTTAGGAGGGATAACTGGA 72885 32 100.0 34 ................................ CTTCCATTTCATGCTTAAAAGAATTAACGGTAAA 72951 32 100.0 34 ................................ CCCACATCCAACCAATAGGATAGCAATGATTACC 73017 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 73083 32 100.0 33 ................................ CGGCAGGAACAAGAGTCACAAACGGAGAATTGT 73148 32 100.0 34 ................................ CAGTTATTGACACGATTGGAATAGAGGTATCAGC 73214 32 100.0 33 ................................ ATTTCCAGACGCCCTTTTGCCCGCAGCGCCTTG 73279 32 100.0 34 ................................ AAGTAATCCCAGTTATGAGCCTATGTTCTTCAGT 73345 32 100.0 34 ................................ CAGTAAATAACAACATGGTCCACAAGCGGAAAAA 73411 32 100.0 33 ................................ ACTGCAACGCTCATGATAGCTTGAAGATACACT 73476 32 100.0 33 ................................ AGTTCACCGATGATTTGCCCACCCGGCTCCCTC 73541 32 100.0 34 ................................ ATCCGTCGCTATAAGCTTTATCTTGTTTGGTCCA 73607 32 100.0 33 ................................ CATTTGACGTCCTGTTTTTCTTGACGGAAATGG 73672 32 100.0 34 ................................ TACAGCATCCGTAGTACCAGTTATTGCTTTTATC 73738 32 100.0 34 ................................ ATGGGTACTTTGATACGCTTACCTGTAACAGGGT 73804 32 100.0 34 ................................ ATAGCACACCGGCTTGTCCCTCCTTTCTTACCGC 73870 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 73936 32 100.0 33 ................................ ACCATAAATTTCGTCCAATTTTGCCGTATCCCA 74001 32 100.0 34 ................................ AGGAATCGGTCATGATTCTGGCATATATTACTAC 74067 32 87.5 33 ...G...T..A..T.................. GTCTTGCCTCTATCAAAGAAAAGTTTGAATTTT 74132 32 75.0 0 ....T.....G...AA.A.C...A...C.... | ========== ====== ====== ====== ================================ ==================================== ================== 35 32 98.9 33 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAGTACCCGCCATTTTTCTGGAAGTAGGTGAGAGTATGCTGGTTTTGATTACATATGATGTAAATACCGAGACAGATGCCGGGAAAAGACGTCTAAGAAAGGTTGCAAAACAATGTGTTAATTATGGAAGACGGGTGCAGAATTCTGTTTTTGAATGCATTCTTGATAACACACAGTGTGTTTCATTGAAGGCTGTATTGGGGGATATTATTGATAAGGAAGTTGACAGCCTCAGGTTTTATTATTTGGGGAATAACTATAAGACTAAAGTGGAGCATATGGGAGTTGACAGGGGGACAGCAGCGGACTCGACTTTGATTTTCTAGTGCGAATAGGAAGTGAACAGAAAAACATTGGGAGATTCGCACCATATTTTGGGGTGTTGGGTGATGGGAAAAGGAGGAATAGAAGGGAAAGGGGTGGTGAGATTAGTGTGAAAGAGTCTATTAATTAGGAGTTTTATACAAAAATAGCTATGAAATTTGGGCATTTTTGCT # Right flank : TTTAGTGACCAGACCTTGCAGAAAGAGGTGAGCATAAAGATGAATACAGCAATAAAAAAGAAACTCCCAATTGGAATAGAGAACTTTGAAAAAATTCGGACAGAAGATTTTTATTATATTGATAAAACAGGTCTGATCAAAGACCTTCTATATAATTGGGGAGAAGTAAATCTCTTTACACGCCCCAGACGTTTTGGCAAATCCCTTAACATGAGTATGTTGAAAAGCTTTTTGGACATTGAGGGTGACATAACATATACAGAAAAGTTATTTAATGGATTGGAAATTTCAAAAGAAACAAGCCTTTGCAAAGAATATATGGGCGCATTTCCAGTTATTTCAATTAGCTTGAAAGGCGTAAACGGCATAGATTTTGCAGCTGCGCGGGATATGATGCGTTCCATTATTGGGAATGAAGCGCTGAGGTTCTATTTTTTATCCGAAAGCAATAACCTGAACGAGAAAGAAAAAATGCAGTACAATCAGTTGACTGCAGTGGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 90505-93777 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKP010000018.1 Blautia marasmi strain DFI.6.18 EOIHOHJG_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 90505 32 100.0 33 ................................ TGTCTGGCTGTCAGAATAGTGATACAGCACTGC 90570 32 100.0 36 ................................ AGCTTGTTCCCAACGATTTTGCCTATCTCCGTGAAG 90638 32 100.0 34 ................................ TGGGCAGCTCTTCGGCGTTGCAAAATGGTGGATG 90704 32 100.0 36 ................................ TTTCATAAGTCAGCTTGCCAGAGCTGACTTTTTCTT 90772 32 100.0 34 ................................ AATCTGAAAACTTGTAGTGGTTTGCGAAATTATT 90838 32 100.0 33 ................................ AAATATGAATTGTAAGTATTACTGCCGGAAAGT 90903 32 100.0 35 ................................ GCCTTGTTGGCCTTATCGGCGTTTTTGGAATTTTG 90970 32 100.0 35 ................................ AGGGCAAAAAAGCTCTATTACAGGTTGTACGACAC 91037 32 100.0 33 ................................ CGATATATATAAAGGATCTGGGCAATTTGAATC 91102 32 100.0 34 ................................ AATGCCCGGGACTGGTGCCAGCGTGGGCGGAACG 91168 32 100.0 35 ................................ CTTAATTATTGCAATGAGGAATTTGACCTGAGCTT 91235 32 100.0 34 ................................ GATGTTGAAAACGCCAGGTTGGAAATGGAATATC 91301 32 100.0 34 ................................ TCTTGATAATTTTTACAAGATGCGTGTGGACAGG 91367 32 100.0 34 ................................ CCGAAAAACTTTAGCAAGATAAAGTGAGGTGGTA 91433 32 100.0 34 ................................ TTATGATTTTAGTAATTATTTTTATATTGGCTCT 91499 32 100.0 34 ................................ AAAGATGCATTGACACATAGCGCAAAGGTTGGTT 91565 32 100.0 30 ................................ AAGAAGTTGGAACATCAAAGGTCGTTCCGA 91627 32 100.0 33 ................................ TACTGCTATGAGGAATGTTTTAAACGTGGTTCA 91692 32 100.0 33 ................................ CAGGGCGTATATTCCCATCGGCACCTGTTCCTT 91757 32 100.0 34 ................................ CCATCGGCACCTGTTCCTTTACCATCTCCAGCAG 91823 32 100.0 35 ................................ AGGTCTGGCAAGCACGGGATTTTATGAAATGCTGC 91890 32 100.0 33 ................................ CTGCGGCAGGCCCACAACAGAAACACATCACTT 91955 32 100.0 34 ................................ CCATGTATATCTCTATCTGTTATGCCACATATCT 92021 32 100.0 35 ................................ CCTTTGTCCACAGAAAGGGTAAATCCCATATTATT 92088 32 100.0 34 ................................ TTTCACATTGATACGCCACAAGGCCGTTTTTATC 92154 32 100.0 35 ................................ CGGGAGGGCAGTCCGCTGCAGGTTCAAGTTCCTTC 92221 32 100.0 33 ................................ CATTTCCTTCCATTGACTAATACCTCTTTTTTG 92286 32 100.0 35 ................................ ATTCGCAGTCAATACATTTTACAGATGTTTTTTGA 92353 32 100.0 34 ................................ TTTCTCCCCTTATCCCTGGGGGCCAGGAAATTGT 92419 32 100.0 34 ................................ AAGCGTGATCAGGGAGCCGTTATAAGAGGTGTCA 92485 32 100.0 34 ................................ TCTGACAAGATAGTATAGTCACCTTTGTAGTCAT 92551 32 100.0 35 ................................ ATCGGAACAGTCCATAAAGAAACAGGAAGCAGTCA 92618 32 100.0 33 ................................ CCTGCATGACCGATGAATCATTTGGGGGCAATG 92683 32 100.0 34 ................................ AGCTTGCCCTGGCTTCCCAAGAGCTCCCTATATG 92749 32 100.0 34 ................................ CACCTCGACCCCAATGCCCTGATACCCTGAATAC 92815 32 100.0 34 ................................ GTTATACTGTCTGCGGGCCGGAAGGTCATCACAG 92881 32 100.0 33 ................................ AATCTGCCTTCTGCGTCCTTTATGCTCTTTGCC 92946 32 100.0 33 ................................ TATTCGCTCCAGGATTTGGAATTTGTATCCTAT 93011 32 100.0 35 ................................ CACCGCATACAGGCAGAATACTGTCACCGCATACA 93078 32 100.0 36 ................................ ATATAACCTCCTATTGTTCATAGCGGCGTCCGCCAC 93146 32 100.0 34 ................................ TTAAATGCCACTACCACCATACCAAGAAGCCACG 93212 32 100.0 34 ................................ AGCTCTTTCTCGGTCATTAATATGATTCACCTCC 93278 32 100.0 34 ................................ CTATTTCAGAGTTACATTTAAACTGTCTTAGTCC 93344 32 100.0 34 ................................ AGCATACTTGTCTTCTGGTATCTGAGAGAGCTTG 93410 32 100.0 35 ................................ GTCACCACGGGAGTCCAGGCAAAATCTACCCTTGC 93477 32 100.0 35 ................................ AATATATTTTCCATCTTTTTTGAACACCTTCCTGA 93544 32 100.0 35 ................................ CCCATGTCTGCCTCCTACATTCCAATCAAAAAACC 93611 32 96.9 36 ............A................... ATTGGGGGATATCCCCCTAAAAATTCCCCGGAGCAT 93679 32 100.0 35 ................................ ATTTTAAATTCCTCCTTTAATAAACGTTTTTCTTC 93746 32 93.8 0 ......................C......T.. | ========== ====== ====== ====== ================================ ==================================== ================== 50 32 99.8 34 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : GTTCCGTTCATCAGGTATTCTATGAATCAGAAAGATGGAAAGTTAAAACTTTCATCCAGGACTGGCTGGATTTTATATGAAGGGGATCTATTTAGTTTTGTGCCAATTTTGGAAGCGGGTAAGTATCTGCGGGTAGGAAAAGGTGCTACCATTGGATTTGGACATTATGATATTTCTTATGATAAATAATGGGGAAATAAAAGGCTGGAAACAGTTGGATTGAGAGGGATTGTGATAAAAATCGGCCTTGAATTTTTTGTAGAAAATGCAGATGATATAATATTTGTTCAGAAGATGATTACTAAGCTTATTTTATAAAGTGCGAATGTGGAGTGAACATAGTTTGCCGGGGAGATTCGCACTTGAAAAAATGGTTAAAAATTGATGATGGAGTGATTTTTTTAAGATATATTTGTAGGAAAGGTTGCATTATTAATCAAAAAGGGTTAAAATTTGGTAGAAAGAAACAATATTTATTGGGAATATTGTGCATGTTTGCT # Right flank : TCAGACAAACGTCTTTCCATATAACAGTGAGAGCATATCCCATATTTTCAAAGTATATCTGGATGTAGATATCCCTGTGGAAGTGAGAAAATTCCGATTTCTTGAACAGGTGCCAGAATACAATCTGGCTCCGGGATACTTGGGGATATAAAGACGGTTTTTTCAGGTCTGACACAAATCTGGGTACTGAAAAAAGCGAGGAGGAGGATAGAAGAGAAAAATTGGAGTTTCTAATGGAACCCGTAACCATTTTGTTCAACGGAGGGAAGAAAATTTACGTTTCGGACTATGCAGGGGGAGAAAATGTTGTAAAAGAATTGACAATAGATGCATGCCTCTTTGATATCGGACGGCCGTTTTGGGGACGACCGCGGGACAGAAAACCTGGACATTTGTCTCCAGTTCGGTCTGCCCGGGGAGGGGAAGATAAAGCCGGTCAGCCTGGCTGATAAAGGGGTGTTTACAGAGAACCCGTATGGGTTCTTATGAGAGATGGCAGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //