Array 1 232444-235835 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQXZ01000001.1 Acinetobacter baumannii strain MEX11594 CONTIG_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 232444 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 232504 30 93.3 30 ............................AA TCAATGTATACAACTCAGTTATCGTAGAAC 232564 30 96.7 30 .............................A TTGGTATCATACCGCCCCAATCATAGCCAT 232624 30 100.0 30 .............................. CTTCTAATGCCTTGGCCTTATTATTTTGTC 232684 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 232744 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 232804 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 232864 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 232924 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 232984 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 233044 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 233104 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 233164 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 233224 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 233284 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 233344 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 233404 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 233464 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 233524 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 233584 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 233644 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 233704 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 233764 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 233824 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 233884 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 233944 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 234004 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 234064 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 234124 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 234184 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 234244 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 234304 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 234364 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 234424 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 234484 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 234544 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 234604 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 234664 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 234724 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 234784 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 234845 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 234905 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 234965 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 235025 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 235085 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 235145 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 235205 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 235265 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 235326 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 235386 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 235446 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 235506 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 235566 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 235626 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 235686 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 235746 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 235806 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //