Array 1 490319-488156 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS483404.1 Corynebacterium renale strain NCTC11140 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 490318 29 100.0 32 ............................. TTGTGGAACTCCATGCCGTCTTCAAGAACGGG 490257 29 96.6 32 ............................A CACTACGCAAACACCGCCCAACCACCCGGCGC 490196 29 100.0 32 ............................. ATGGGCGTGGCACAGGACGAACTCGCGCCGCA 490135 29 100.0 32 ............................. CTCAGAATCAGGGTCCAAAGTCCGTTTCTCAC 490074 29 100.0 32 ............................. GTCGTCACAACGCCGGCACCGCGTAGCACTTC 490013 29 100.0 32 ............................. ACAGTCACGCCCTCACGCTCGGCGGAGCACTC 489952 29 96.6 32 ............................T TGTGTGAATCTTGCGTTTGCCGACGGAGCCGC 489891 29 96.6 32 ............................T GTTCCCCTACAACATGACCCTACAAATCAATG 489830 29 96.6 32 ............................T CAATCGCGGAGCGGAGCCAATCGATTACCGAT 489769 29 100.0 32 ............................. CACACCATGATATGCCCGCCCTGCTGGAGGTT 489708 29 96.6 32 ............................T TGCTCAAAAAGTGGAGGTGAAAGACATGCAGG 489647 29 100.0 32 ............................. ACCATCACCACCCGCACCGGCACCTACTACGG 489586 29 96.6 32 ............................T TGGAAAGCTGCTTTTTTGTTGAGTGGTGTGTC 489525 29 96.6 32 ............................G ATGGTGCGCGAGGACGCGCAGGTGACGTCGGT 489464 29 96.6 32 ............................G GGTGCGGGCACGAAGTTGGGCACCATCGCAGT 489403 29 96.6 32 ............................G ACGATGAGGGTGTTTTGGGTGAAAAAAAGGGG 489342 29 96.6 32 ............................G CATTAAGCGCGCGCCACTGTCAAGCGATATGG 489281 29 100.0 32 ............................. ACTCAAAACGCACCGGACACCCCTCGCACAGC 489220 29 100.0 32 ............................. AGCTCGCTCATGGGCGTGTCATCTCCCTTTAT 489159 29 100.0 32 ............................. AACAAATCACATCGGCAACCGTGGCGCCGAAC 489098 29 100.0 32 ............................. CACAGTCGAGGCGTGGAGCCCATCAGATGCCG 489037 29 96.6 32 ............................T TTCAGCGCGTTCTGATCGGACTTGGCCAGGTA 488976 29 96.6 32 ............................T AATAGAAAAGTGGGGAAGAAAGGAACACCAAC 488915 29 100.0 32 ............................. ACCTCACATACCTGTGCCGGACACTCGCCGAA 488854 29 100.0 32 ............................. CGGTTCCCCGCCGTCGATGTCTTCCACCATGA 488793 29 96.6 33 ............................A CCGGAGGGCCAGCCCACCCCGTTGGGGTATCCG 488731 29 96.6 32 ............................T CCTCCATAATCTCCCCTGAAAAGAAAAGCGGG 488670 29 100.0 32 ............................. ACCAACCTAAAAACGGGGGTGGTGTAGCGTGA 488609 29 96.6 32 ............................G TCAAACAGTAAGAGGGTTTACCTCGCACGCGA 488548 29 93.1 32 ..............T.............T TCGCACCTTGAGACGGTCGCCGCGCTCGACGC 488487 29 93.1 32 ..............T.............G CACTCTACGAATCTGCAAATCATGATGGAGAC 488426 29 96.6 32 ..............T.............. GGCGAATACCGCGCGGGTGTCAAGGCCGTAGT 488365 29 96.6 32 ..............T.............. AGGTAGTAAGCGACTATAAGCGCCTAGGCGCT 488304 29 96.6 32 ..............T.............. GAAGCCTTCGACATCATCGAAAACCAGCCGAA 488243 29 96.6 31 ..............T.............. CCATCGCGGTACGCCGGTCTTCTTCTGTGGG 488183 28 75.9 0 ...........G..T..A.....-..ATA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.2 32 GTGTTCCCCGCACACGCGGGGATGAGCCC # Left flank : ACCACACGTCAAACACCGCAGCAGCAGCGCAAGCTACATCAACTAGATGCTGCGTTAATGAAAGATACCCAGATTCATCGCCAGACTTGGCCCACAAAGAATTCGCCATGGGGCTGCGCCGAGAAACCCACCCATCGAACAGACGTGCCACATCAAGGGCACTTTTCGGAAGTTCATGTCCGACACTCATGATTAGCTTTCTTTTAGATGTTTTCTTCGATGGTTTTGAACCTATCCTGAAAACTAAAACATGTCAACACCCTATACCCAACTTAACGACTTTTTATCTGTTAAGTTGACGCTCTGAGAGCATCGTAGTGCGAGGTTATAGAATGTAGCTCATCCCTGCTTTTGCAGGGATGAGCCCTCGTTGAGTTGGGGCGATTATTTTTCCCTGCACCTGCAGGGACGGACTTAAGCCCCTATTTCCGTTCGATCAAGTCATATGTAAAACATATGTAAAATAGGCAATCGGCTGACAAAACTCCTGTTCAAGGAGT # Right flank : ATTCTCCAATTACTATTTCGGAACTCTGAACGCTTCTGATGTCTACAGTTTCACGCCCAGCTTCCGCATCACCACGAAATTAATCCCTGACACTCTCCCCCACCGCGGGCCATAATGGTCCCCATGACTCTTTATGATGACACCCTCGCCCTTTTGCAGCAGTTGATCCGCAACGCGTGCGTCAACGACCTCACCGCCGATTCTGGTCATGAGGTTCGTAACGCGGATACGTTGGAGGAGTTTTTCGCCGCGGAGATCGCATCCGGTTCGGTGAAGGTGCAGCGTTTTGAGCCACATCCGGGTCGTCGGTCGGTGGCGTTTACGGTGCCTGGCGCGGATGAAACCGCTGAACCGCTTACTCTTTTGGGGCATATTGATGTGGTGCCCGTCGATAAGCCGAAGTGGACCACGGATCCTTTCGGGGCGGAGATTATTGATGGGAAGATTTTTGGCCGCGGCGCGATGGACATGCTCTTCATCACCGCGGCGCAGGCTGCTGT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //