Array 1 31331-32395 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXN01000001.1 Corynebacterium diphtheriae bv. mitis strain NCTC380, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 31331 28 96.4 33 .................A.......... CGCCCCGGTCATCCGTAAGCACCTCAAAGACGC 31392 28 96.4 33 .................A.......... CTGAAATCTGAGGTTGCGGCGCTGAAATCGCAG 31453 28 96.4 33 .................A.......... GCGATTGAAGCTGAGCGGCGGTGCCGCCCGCGT 31514 28 96.4 33 .................A.......... TGCCAAATTCCAACAAAAATATACCTGGATCGC 31575 28 96.4 33 .................A.......... CCGCTAAAGCCGATCTCCGCGACTGGGCTATGA 31636 28 100.0 33 ............................ CGTCGAGCCGACCAATTCGCCGCCCAAATACTC 31697 28 100.0 33 ............................ CTCTGGTATAAAACCAGCCCCAGTTAGTGCAGT 31758 28 100.0 33 ............................ GTTCTGGCATTCGACGATACAACATTGTGCACA 31819 28 100.0 33 ............................ GTTCTGGCATTCGACGATACAACATTGTGCACA 31880 28 96.4 33 ......................G..... CTACGAGAGCATTAAGGGGGGCTATTTCTTTAC 31941 28 100.0 33 ............................ CGAACTCGAGGACATGGAGGCCACGCGATGAAA 32002 28 100.0 33 ............................ CCGTGAAGCAGTCACCAAGAACATCGAGAAGTT 32063 28 100.0 33 ............................ CAGTCCCCAGCGGCGGCAATTATCCCAGTTCCG 32124 28 100.0 33 ............................ GTATGAGCTGATTTACCCTGATGAAGATTTCTT 32185 28 100.0 33 ............................ CGCCGGTAGGGTATGCGACCGCCGCGCAGGTCA 32246 28 100.0 33 ............................ GTGGGGTTGATTTGATTATACCGCATGGTGCGT 32307 28 100.0 33 ............................ GTCATAATCAGCACTGTCAATCCTCATGTATTG 32368 28 89.3 0 ...........GTC.............. | Deletion [32421] ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.2 33 GTTTTCCCCGCACTAGCGGGGATGAGCC # Left flank : CTTACTTGGAAAGAAACTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCAACCCGAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGATTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAAGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAAGAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CCAGGGACTTTGAGAACTGGACCGCCGTGATTCCCTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGAATCTGTGTTTTTCATTCAGAGAAATCAGTAAATGATGGCTCTACTAAAAAATTTTGAAAAAACTAACTTTTAATATCTATAGAGTGTATTCTGTGGAAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGATGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCGTCTTGCTCGAAAAGGGAAAGATCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACTAGCGGGGATGAGCC # Alternate repeat : GTTTTCCCCGCACTAGCAGGGATGAGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //