Array 1 17651-21768 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHID010000005.1 Aeromonas caviae strain CN17A0027 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17651 29 100.0 32 ............................. ATAATAGGTCTTAGTAAACCAACTGGCCGACA 17712 29 100.0 32 ............................. CACGTTCACGGGCTTTAACTACATTCTGAGCA 17773 29 100.0 32 ............................. ATGAGGTGCTGGCGGTTGACCAACTCATAAAC 17834 29 100.0 32 ............................. CTGAAATCGTTCAGGGGCAAGCTGAACAAGGA 17895 29 100.0 32 ............................. TGGCGTGGCCATATGATGGCAATGGCGCACTT 17956 29 100.0 32 ............................. GCTGGTGGACTTCGGATCGCGAGCCTGCATCA 18017 29 96.6 32 ............................A GGCGGCCACAGCTTCGACGCTATGGTGTTGCC 18078 29 100.0 32 ............................. GCGGTCGAGGGCAGCCCAGCGGCCGTCTTCTA 18139 29 100.0 32 ............................. GAGCCCCCATGGCCGTACTTCGTTCCCTGGTC 18200 29 100.0 32 ............................. GATTTCGCAACGCCAGAGTGGTGCAAGGATGC 18261 29 100.0 33 ............................. CAGGCGCGCAGTCTCATCGAATCGGGAGCTGTC 18323 29 100.0 32 ............................. TATTCGGATGAGTAGCCTGGAACTGGCCGAGC 18384 29 100.0 32 ............................. ACTTTCCGTACCGCACAAATATCAATCATGAG 18445 29 100.0 32 ............................. ACAGTACCGCCGTGCTGGTGCTGATGCTGGAG 18506 29 100.0 32 ............................. TGGCAGTATGCCTTGGCGAGCTTGGTGTCGTA 18567 29 100.0 32 ............................. CCTGGCCACAATCGCCGGCATGCCGGTAACCA 18628 29 100.0 32 ............................. CGTCATTTTATGTTGCCTCACTGAATGCGTTC 18689 29 100.0 32 ............................. TTGGCGACCTTGTGCGCTTCCCCGGACTGGCG 18750 29 100.0 32 ............................. TTCACACGGGCGATGTCGTCAGCACCCAGGTC 18811 29 100.0 32 ............................. CGCCTTGAGGCCGGTATAGCTGCCATCCGGCA 18872 29 100.0 32 ............................. GATCTGGCTTCCTCCGAACCGGAGAAGGCCCG 18933 29 100.0 32 ............................. CCTGGTGCGAGCTGGATCCCCGCCGATGTGAT 18994 29 100.0 32 ............................. ATCCTGACCTGGGGCGTTATCTCCGGTGGCAC 19055 29 100.0 32 ............................. CACGTTCTCTCCGCCGCCCTGTACCAGCAGGA 19116 29 100.0 32 ............................. CGTTGGCGCGGGCCTGGTCGAATTGGGGATTG 19177 29 100.0 32 ............................. ACCTGGTTCTGGCAAGACATCTACAGCCGCAA 19238 29 100.0 32 ............................. ATCACCAAGATCCTGGCACCGTCCGTCAACGT 19299 29 100.0 32 ............................. GTTGAACGGCAGGGCCGGGTCGATGCTCTGGT 19360 29 100.0 32 ............................. TCCGTGGGCTGCGTGATGTTCATGCTCGACAT 19421 29 100.0 32 ............................. GCGCTCAGGGTGCTGGTTGCTGCACTGGATGA 19482 29 100.0 32 ............................. GTGATGCACATTTCTGCATTACTGCCGACCAC 19543 29 100.0 32 ............................. GCAAGCTCGGTGGCGATGGTCAATGGCGCCAG 19604 29 100.0 32 ............................. ATCTTGAGCATGTTGTCGCCGCCCTTCTCTGC 19665 29 100.0 32 ............................. ACTGGATTCGCCGCCATTTCGAGGCATGGCTG 19726 29 100.0 32 ............................. CAATCGCAGATTTTGGCGAGCGTCGGGTTATT 19787 29 100.0 32 ............................. CACCCGAAGGCTAAGCAAGTGGTGGCGAAGGC 19848 29 100.0 32 ............................. ATTCAGGAGCAACATATCCAGTGTTATCTTTA 19909 29 100.0 32 ............................. CAATCTTTGTTGCCAATTGCAAACTCATAGTA 19970 29 100.0 32 ............................. ATTGTTCAACAAGAAATTCCGAAGGAAGTTAA 20031 29 100.0 32 ............................. GTGGCCTCGTTCATCTTGGCTCGGTCCTCTAC 20092 29 100.0 32 ............................. CAAGCGCAGTTGCAGCAGCGGCGCGATCAACT 20153 29 100.0 32 ............................. GCTCAACGTCTGGCGCTCCCAGCTCGTCGCTT 20214 29 100.0 32 ............................. GAGGGCACCTCCAGGCCAGTGGATGAGGCCGT 20275 29 100.0 32 ............................. TTTAGTCCTACGTCGAATTGGCTGATGTCAAT 20336 29 100.0 32 ............................. TCGTGCTGGTCAACCCAGCGCGTATGCCCTTC 20397 29 100.0 32 ............................. GGTACTGCTGCTGATAAGACAGTAACCATGAT 20458 29 100.0 32 ............................. ATGGTCGCCACAACATCCAGTAATAGGAGGTG 20519 29 100.0 32 ............................. CTAATAGAAGAACAGGAGCGGTCATGATAACA 20580 29 100.0 32 ............................. TTCCACTCAGACGGGTACAGCCTGCAATACGC 20641 29 100.0 32 ............................. TGGAGAGCTCAGGCAGCTCATCGCTTACCAGG 20702 29 100.0 32 ............................. GTGGGGCGCCACAGCGAAAAGCCGCACGAGTG 20763 29 100.0 32 ............................. TTGGCAGGAACCGTGATGGGTGAGCCTGGTGA 20824 29 100.0 32 ............................. CATCCCGGATCAGGTCATAGCCCGGCTTGGCA 20885 29 100.0 32 ............................. CTCATGACGCCCCGGCAGGCTTCTGTCTGGCG 20946 29 100.0 32 ............................. TTCAACTGCCGCGTGAAGCACCACATGGAGAG 21007 29 100.0 32 ............................. TTGGTCTGGGTGCATTCGTAGTTCTGGTCGTA 21068 29 100.0 33 ............................. TCTGCCTTGCTGCGGGTGATATCGTTCTCTGGC 21130 29 100.0 32 ............................. GCTACTACCTGCAGATCCTGCCGGCTACCGCC 21191 29 96.6 32 ............C................ GTGGTATTGCAGTTGTGACGTGGGGCGGCCCG 21252 29 96.6 32 ............C................ AGATGGCTAACACCCTGACCGGACTTATCCCG 21313 29 96.6 32 ............C................ ACGTATTCGCCAAGGTTAGCGTCCCAGACCTT 21374 29 96.6 32 ............C................ CCGTGAGTAAAGCGGTCACTGTAGAATGAGAA 21435 29 96.6 32 ............C................ TGATCACGACCTACACATCCCGTGACGCCGAG 21496 29 96.6 32 ............C................ TTCATTGTTCGGGCCAGAGAGCTGGTCGAGCT 21557 29 93.1 32 ............C...............C AGACAAGGCGGCATCGATGCGATAAAGAAGCC 21618 29 96.6 32 ............C................ CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 21679 29 86.2 32 ........T...CT.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 21740 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 68 29 99.3 32 CTGTTCCCCGCGTCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCCGCCATCCCCGAACCCGTCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGAGGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGCTTTTCCATGGTTGGAAAAAGCCATAAAAATCAATAGCATATGTTAAGT # Right flank : GAATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGGGTAATCGTTCTGGCTGTCATTGTTTGATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTTATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTGATCTGATCAGATAAAGTGATCAGATCAGGCAACGCTGATCTGATTCCCCGATCACTTCCGGTGATCACTTCTCAGATTTTTTCCAGATACCAACCCCATGGCTCGTTTTGAAAACCTGCTTGGCATGAGATGAACTGCCAGCCAAGGTGGTACAGGTCATTATTCAAACGCCAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGTCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGTCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //