Array 1 39-493 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJOO01000085.1 Tepidimonas fonticaldi strain AT-A2 Tepi_fontAT-A2_85, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 39 28 100.0 33 ............................ GTACACCCTGGCTATTGCCCGCGTCTTGCTGTG 100 28 100.0 33 ............................ GAAGAGGCGTCCCGGCTACATCATCGACTGCTC 161 28 100.0 33 ............................ CCCTGAGCCCGCACGTCCAGGCCGTACTGGACA 222 28 100.0 33 ............................ TCCGCGCCCTCGAGGAGCAGGGCGACATGGTAG 283 28 100.0 33 ............................ CCCCAAGCGGTTGTTCAGAAAACCGTCGTGCTG 344 28 100.0 33 ............................ CGACCAGATAGCGGCGGTCGCTGGCATCGAGCG 405 28 100.0 33 ............................ TCAGCGGGCCGCTGGCAGCCTGAAGCGCGGCAG 466 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 33 GTCTGCCCCGCGTGAGCGGGGATCGACC # Left flank : CGACCCCCACAGGGGAAAGAGGCGATAGCAACCACGCTG # Right flank : CCAGGGCCACTTGACACTCGTGACGGGATCCTTGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCCCCGCGTGAGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [23.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 13021-18854 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJOO01000010.1 Tepidimonas fonticaldi strain AT-A2 Tepi_fontAT-A2_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================ ================== 13021 28 100.0 33 ............................ CGCTAGCACCAGCAGCAAGACCTACGCTAGCAC 13082 28 100.0 33 ............................ TAAACCCTAGGGCTTCACTTCGTGTTACTGCCA 13143 28 100.0 33 ............................ TCTAATCACTTCTTGCGTCAATTTGCTGTCATC 13204 28 100.0 33 ............................ GCTGCGCGAGCTGCTGGGCGAGCGCTTCGGCGA 13265 28 100.0 33 ............................ TCGAAGGCCGCGCCGATGGCCCGCAGATGGAGC 13326 28 100.0 33 ............................ CCGCGCCCAGTCACGCAGCGCGTAGCTCTTGAA 13387 28 100.0 33 ............................ CAGGTCGCAAGCTGCCGCATGATGTGGAGGTGA 13448 28 100.0 33 ............................ TCCGTGGTTCCCGGCCGAGCTGGAGGCCGAGCG 13509 28 100.0 33 ............................ TTGCGCAGGCTTGGCTACGTGTTCGGCACGCAC 13570 28 100.0 33 ............................ CTAACCAGATCGCCCAGCGCGATCATTCCAATG 13631 28 100.0 33 ............................ CTCGTCACCAAGCTGGTCAAACACTTCGCTGAT 13692 28 100.0 33 ............................ TCCTCCGCAGCCAACGTCGATGCGTCGGATGTG 13753 28 100.0 33 ............................ ACGGCACATAGGGGAAAAAGCGGTGGCTGTACG 13814 28 100.0 33 ............................ CCAGCTCGACAGCGAGCTGCTGCAAAAGCAGGC 13875 28 100.0 33 ............................ CACGCCCATGCGCTGCTGTTGCGGCAGCTTCTC 13936 28 100.0 33 ............................ CACGGTTACCGACCCGATCGCATGATCGCCATG 13997 28 100.0 33 ............................ TGCCCACGGCGGCCTGGGTGCGGAAGGCATCGC 14058 28 100.0 33 ............................ CCAGCGCATCGAGATCGACGGCCAGACCTTCGA 14119 28 100.0 33 ............................ TTGAGATGGTATTTGAGGCGGCGGCCATCGCCC 14180 28 100.0 33 ............................ CTTCTCGCCGGGCATCAGGGCCTGCAGCTGCTC 14241 28 100.0 33 ............................ CTTCGACCAGGCTTTCGACATCCTGCTCAGACA 14302 28 100.0 33 ............................ CGTTTGCCAGACGTCGAGCAGGAGGGGTACATC 14363 28 100.0 33 ............................ CCCTTCTTCCACCTCCCACACCTTGACCCATCC 14424 28 100.0 33 ............................ TCCGGTCAGGGCGGCAATGCTCCGGCGGTTGAT 14485 28 100.0 33 ............................ GCACGCGGCCCATCTCGTCCTGCGTTTTTTCGA 14546 28 100.0 33 ............................ CCGCATGACGGCGGTGCGCGATACCATTGATGC 14607 28 100.0 33 ............................ TGTGGTTGGTGATTGTCAGCATGAGACGCTCCT 14668 28 100.0 33 ............................ TGGTCTGCCATGCGTAATACGAGGTGGCCGGCG 14729 28 100.0 33 ............................ TGGCGACATCCCGGGGGTGAAGTCGCCGCCGAT 14790 28 100.0 33 ............................ CCTGGTGCTGGCCGAGCGCCTGGGCCGCAGCGA 14851 28 100.0 33 ............................ GCTTGGGCGATATGCTGGCGGGGCGCCATGTGA 14912 28 100.0 33 ............................ CCTGGTGCCGGTCACTGGCATTCTGCGCGAGAT 14973 28 100.0 33 ............................ CCCCGCACGCACATGGTGACCAAGAGCAAGACC 15034 28 100.0 33 ............................ CTTGTCGTCCGGGTAGGGCTCCAGCGCTGGGCG 15095 28 100.0 33 ............................ CACGACCCGTGCGCCGTCGGCTGGCGAAAGCTG 15156 28 100.0 33 ............................ CCCAAATGCCAACCCCACGTATAAGGTGATCAA 15217 28 100.0 33 ............................ CCAGGGGGATCATTCGACTCGCCCGGACAGTTC 15278 28 100.0 33 ............................ CGACGCTCAGGCTGGCCAAGAGCCGCAGGCGCT 15339 28 100.0 33 ............................ CGACGCTCAGGCTGGCCAAGAGCCGCAGGCGCT 15400 28 100.0 33 ............................ CATGGCGTAGTCCTCCAGCACGGCGCGCACGGC 15461 28 100.0 33 ............................ CATCGTCGGCCCCGGCGGCATCCGCCTGCAGAG 15522 28 100.0 33 ............................ TGTAGACGACCGCTCCGTCTGTGTGGTGCACGA 15583 28 100.0 33 ............................ TCGAGGGGACGGACGCCAACGATTACGCCAGGG 15644 28 100.0 33 ............................ CGACCTGCAGATATCCGGTTGGCGTGTTGAGGT 15705 28 100.0 33 ............................ CCCGCCTCGTTTGGTTCTTGGTACCTGCCAGAA 15766 28 100.0 33 ............................ CGAGTGTCTGGAGCGTGAGATGCGGTACGCGCA 15827 28 100.0 33 ............................ CGCCGACGCAACGACCGGCCGCGCGATGCCGAG 15888 28 100.0 33 ............................ CGATCACGATATCCTGTGTTGCGCCGTACATCT 15949 28 100.0 33 ............................ TTATCTTCCCTGACCGCCTTTGCAATCCCTCGC 16010 28 100.0 33 ............................ CCATCCGGAGACTGACTGAGACATGGGGAGCGT 16071 28 100.0 33 ............................ CGCCGACGGCTACCTGGAGCGCAAGGTGACCGA 16132 28 100.0 33 ............................ CCCACAGGGGAAAGAGGCGATAGCAACCACGCT 16193 28 100.0 33 ............................ GTACACCCTGGCTATTGCCCGCGTCTTGCTGTG 16254 28 100.0 33 ............................ TCAGCGGGCCGCTGGCAGCCTGAAGCGCGGCAG 16315 28 100.0 33 ............................ CCAGGGCCACTTGACACTCGTGACGGGATCCTT 16376 28 100.0 33 ............................ CGAGGTGCAGGCCATCCGCTCGCATGGAGGTGT 16437 28 100.0 33 ............................ CATCCCGCCGACAGTGAAGCCACGCCTGCACTG 16498 28 100.0 33 ............................ CGACCATGGCCGACATTCCGACCACCGAGCCCC 16559 28 100.0 33 ............................ TCTTGGCGATATCGTCTACCCGGGCCATCCAGT 16620 28 100.0 33 ............................ TCGTCCATGTAGCGCACATACTCGCGAACGCCA 16681 28 100.0 33 ............................ CATCGTGTCGATGCGGTCCACGTCGATGAGCTG 16742 28 100.0 33 ............................ TCACCCTGGACCGGCTGGAGCTGATCAGCCGCG 16803 28 100.0 33 ............................ CTTCGCGAACCTCGATGGTCGCACCACGGCCAT 16864 28 100.0 33 ............................ CGACAAGTTGAATATGGCCGACGAACGCGCCCA 16925 28 100.0 33 ............................ CATGCTGGAGACCCTTGTCACGCGCGGGCCGTG 16986 28 100.0 33 ............................ GCTGGTGCAGGCGGCGATGCGGGCCATGGGGCT 17047 28 100.0 33 ............................ CCGGCTGGATCAGCTTGCTGCGCCCACGGCGGC 17108 28 100.0 33 ............................ CCAGACGGCACCGTCCCAGCTTTGAACCAGAAC 17169 28 100.0 33 ............................ CAACCCGGCGTTCCCGCCGCTGCCCCAGTGGCC 17230 28 100.0 33 ............................ CTGGTGATCCATAGCGCGTCACCGCTTCGCGTC 17291 28 100.0 33 ............................ TCGGCTCGACGAGCGGCTGCCAGTCGGCCAGCG 17352 28 100.0 33 ............................ CTCGGCGAAGTCGCCGATGGCATAGGCCTTGTA 17413 28 100.0 33 ............................ CGAGCGGCAGCAGCGTTTCGCGGCCTTCATCCG 17474 28 100.0 33 ............................ CGGCGAAGCCGCGCCGCAGCGAGACGCGGGCGC 17535 28 100.0 33 ............................ CCCCGACGGCACGCGGATCACCTCATCCGACGG 17596 28 100.0 33 ............................ CGCCGTCTCGGTGACGAATGCCACCGACCTGAT 17657 28 100.0 44 ............................ CTCGTCGGGCGTGTAGACGCCGAGGATGACGTCGTCTGCCCCGC 17729 28 96.4 33 ..G......................... TCTACCGGCGCGACTTTTGGGACAAGGTGCGAG 17790 28 100.0 33 ............................ TGCTGCGCCAGCTTTGCATGCCGGCCACGTCGC 17851 28 100.0 33 ............................ CATCAGAAAGCCACCAGGATAGGACTTCATGTT 17912 28 100.0 33 ............................ CCGCACCGTGCTGTTCACGACCGTGATGCGCGC 17973 28 100.0 33 ............................ CTCCTGCGCCCAGGCGATGGGGTCGTTCATCGC 18034 28 100.0 33 ............................ CGGGGTCAAGCTCCACCTGCGCGCCCTCAAGCA 18095 28 100.0 33 ............................ GCACCGGCCTCGGCTCCGGCGTGGCCGACATGC 18156 28 100.0 33 ............................ GCCCTCGGGGTCGCGGCTGGCGTAGCCCATGGC 18217 28 100.0 33 ............................ AGGGATGAGCGGGATAGCTTCCACAATAGGCCA 18278 28 100.0 33 ............................ CCGATAAGCTCGACCACTTGATCGACCACGCGC 18339 28 100.0 33 ............................ CGGCCAGACGATGGCGCGGTAGATGCCGCCGCG 18400 28 100.0 33 ............................ CAGCCCGCCCAGGCCATCCGCCATGATCTCGTG 18461 28 100.0 33 ............................ CGGCCGCTTCAGCGCTGCCGCCACCTCAGGTGC 18522 28 100.0 33 ............................ CGCTGCGCTGGGTGCTGCTGACCGCCCTGTGGC 18583 28 100.0 33 ............................ CTCATAAGCAGGATCAAGAGGGTAAGCACTTAT 18644 28 100.0 33 ............................ TGCCGATGACTTCCAAAATGGCCTTGGCATTGG 18705 28 100.0 33 ............................ CTTCGAAAGCTCGCCGAAGGCGAGATGGTGATA 18766 28 100.0 33 ............................ CGGCAGCCAGGCGCCCGAGGGGCCGCGCAGCAT 18827 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================ ================== 96 28 100.0 33 GTCTGCCCCGCGTGAGCGGGGATCGACC # Left flank : CCTGCCCTTGGCGTTCGGCGCCGTGCGCGCGTACCGCGATGGCGACGCGGACCACCTGGAGCGAGAAGTGCGGCGCCGTGCGGCGAAGCTGTTCCGACAGGAAAAGCTGATCCCCCGCATGATCGACCGCATCAAGGAGCTGTTCGATGTCGATGACCGTGGTGGTGACGCGTAACGTCTCCTCCCGCGTGCGCGGCTTCCTCGCCTCCGCCATGCTGGAACTGGCCCCGGGCGTCTACAGCGCGCCGCGCATCTCGCCTGCCGTGCGAGACCGTGTTTGGGACGTGCTGAAAGACTGGTTCCCCAACGAGCGGGACGCGTCGCTCATCATGATCTGGCAGGAACGAGACGTCCCGGGCGGCCAAGCCGTGCGCACGCTCGGCAGCCCGCCCATCGACTTCGTGAACGTCGACGGCCTCGTCCTCGCCCGCCGACCGCCCCCGGTCGGAGCTCCTTAACAATTCGGTTTCTCTTTTGCAGTCAAGGTGTTAGACTGCAGA # Right flank : CACAAGCCCTCGATCGGGCGATTCTGCCGGCCCACCAGCGCCAGCTTCTCGCCCAGCTGCGCATGGCTGCGGGCGGCCTCCGCCGTGCGCGCCTTCAGGCGATCCATGTTCTGGCCGAGGGACTGCAATGCGCCATGCGCCGCCCCGGCGGCTGCCGTGACCAGAATCCCGAGCGTTACCGTTGCGCCTGCCATGCTCTATACTTGTCTAGCCATGTCTTCGGAAAACCTTGCCCTCGCCGCGCTCTGCGCCGCCATGGCCGCGCCCGCGCTGGTCGTGCTGATCACCGGCGGCAGTCTTGGCGTCGCGCTGCTGGCGGCCGTCCTTTGCCTGCCCGTCAGCGGCCCGATCATGGCCGCCGTTTTCGGCGCCGCCACGGAGCTGTTCGGGCCGAAGCACTAACCGCCGCCGCGCTCGGCCCTGATCTGCTCCTGCGCCAGCTTCACCCAGCGCAGAAAATCCCCCCACCCCCAGCGCATCGATTTCCGAGTCTGCCCCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCCCCGCGTGAGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //