Array 1 101394-100327 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JZTQ01000009.1 Salmonella enterica subsp. diarizonae strain 50267 50267_c9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    101393	    29	 100.0	    32	.............................	TACCGGGATTGGTTCCTTTTTGATGAGATGGA 	
    101332	    29	 100.0	    32	.............................	CAAATTGTTTTGGCTACGTTCGTCTTAACGCG 	
    101271	    29	 100.0	    32	.............................	TGTGGCGCGATTCCTTGTACCCACTATTCAGG 	
    101210	    29	 100.0	    33	.............................	TCTCGCGCTCCGTGTATACGTAGAGCGTACCGC	
    101148	    29	 100.0	    32	.............................	GATGCTGCCGGATTTGATGAAGCTGATTTTGC 	
    101087	    29	 100.0	    32	.............................	GGATTCAATGAATTTCTGAACGTCTCCCATAA 	
    101026	    29	 100.0	    32	.............................	TGGAGATGGCCCAGCTGAAAGAGCGTCTTGCG 	
    100965	    29	 100.0	    32	.............................	CCTCTTGGTTTGGTAATCCATCTGTTGGGTTT 	
    100904	    29	 100.0	    32	.............................	CCGTCAGCCGCCATCAACATGGCCTATAACGG 	
    100843	    29	 100.0	    32	.............................	GGTTTCGAAAGGGTTTGATGAGCTAGTGATAA 	
    100782	    29	 100.0	    32	.............................	ACCCGACGCCCAGATACTGCGCTTTTGACTGA 	
    100721	    29	 100.0	    32	.............................	CGACCTTCATTGATGTAAACGACACCATCTCC 	
    100660	    29	 100.0	    32	.............................	TCAGCGCCGCGTCTGACGCCGGATCATATTGA 	
    100599	    29	 100.0	    32	.............................	TTGCCTTACATGGACAACGTTGTGTGGAAGAG 	
    100538	    29	  96.6	    32	.........................T...	ATGATTTTCTCCTCAATTACCCGCTATAATAC 	
    100477	    29	  96.6	    32	.............T...............	TTTGCGCTCGCTGACGTCAACAGCTTCTACGC 	
    100416	    29	  96.6	    32	............T................	CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC 	
    100355	    29	  86.2	     0	............T............G.TA	|                                	
==========	======	======	======	=============================	=================================	==================
        18	    29	  98.7	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCTGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGGTGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAACGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT
# Right flank :  TTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTCGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCCCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTCG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//