Array 1 222608-224028 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCZR01000035.1 Streptococcus agalactiae strain 418136 ctg7180000003289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 222608 36 100.0 30 .................................... AAGCTTTCCTGATAAAGGCTTTTTCTCGTC 222674 36 100.0 30 .................................... GATTGCGCCAACTACCATATCTTTCGCTTG 222740 36 100.0 30 .................................... TAAGAAAATATTTTGACTATTTTTATACTA 222806 36 100.0 30 .................................... AATGATATCTGTTGCTTTTACTACGAAATA 222872 36 100.0 30 .................................... TTGTTCGCTATCTGATAGCCCTTTTGTTGT 222938 36 100.0 30 .................................... ACCATCAAGGCTCTTATCTGCAGATTGTTA 223004 36 100.0 30 .................................... TAAAATACTGTAAAATCGTAATCGACATAA 223070 36 100.0 30 .................................... TAACCCTATGTTTGATAATATTTTAGATAT 223136 36 100.0 30 .................................... TAAAATCCTGAAACAGAATGGGATTGATAT 223202 36 100.0 30 .................................... AAAATCAGAACGCCTTATTTGAAGCAGTTA 223268 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 223334 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 223400 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 223466 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 223532 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 223598 36 100.0 30 .................................... TAAGAAAATATTTTGACTATTTTTATACTA 223664 36 100.0 30 .................................... AACCACAAAACAACATGCCACCTTACTGCA 223730 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 223796 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 223861 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 223927 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 223993 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //