Array 1 16803-17631 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973346.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 16803 35 100.0 42 ................................... CTTACCAAAACAAGTGCAACACTAGAGGTGTAACAAAGACTT 16880 35 100.0 40 ................................... GCCTAACGGGGAATTACGTTAGACTGGCCGCCGTTTAAAA 16955 35 100.0 35 ................................... AAAGCTCTTAACGGCAAGAATGCTGTAGGGTTCAT 17025 35 100.0 29 ................................... CTTAGTTAGAAAAGAGATCTTTTCTTCGT Deletion [17089] 17089 35 100.0 40 ................................... GGATTACGACGTGCCATTTTGTTGCCTCAGTGTGGATCTT 17164 35 100.0 35 ................................... GGACAAAAACTGCCACCCCCTCTCGTCGAAAAAAG 17234 35 100.0 36 ................................... GTTATATAAAACGCAAAGGTACCCTGTGCGTTGCAT 17305 35 100.0 34 ................................... TCTTACAACACCCCTCACTGCGGTTTGTTCCGCA 17374 35 100.0 40 ................................... TTCAGATCGTTCAGGCGTCCTGAGACGTAGAGGTTGAGCT 17449 35 100.0 39 ................................... TAACCACGTATTCTTCTGGGCTACCATTAATTTGGGCAA 17523 35 100.0 39 ................................... GATGTGTAGGGTCAATTCATGAATTGACCCTACAATTTT 17597 35 91.4 0 T..AA.............................. | ========== ====== ====== ====== =================================== ========================================== ================== 12 35 99.3 37 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGGAGGTGTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGAGTCGTCGCGTGGAAGCAGTGACACCCATTGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGGATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTTATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGCGAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATTCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCAGGATTATGCGTCAGTGGGGACAACAATTTCAGAGGGACTTTAACCAGACTGAACTCGGCAGAATAATTTACGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCCGATCTACAACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGATTTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 19856-21147 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973346.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 19856 35 100.0 37 ................................... TAGGATTGCTGCCATAGAATAACTCAATATTAGTACT 19928 35 100.0 40 ................................... TGTCTTATCCCCGGCTGCTACTGAGTTAATGAGAGTAGTG 20003 35 100.0 45 ................................... CGCCGTTTTGGACGACCGTGTCTACCAGATTCTTTAGACTCTCTT 20083 35 100.0 42 ................................... CCTTTAAGGACCGAATTTTGCTTTCTAGATCAGCGATTTTTT 20160 35 100.0 39 ................................... ACCAGTTGGAGGCACTCCTCTAGGCATTTTTCTTGCCGA 20234 35 100.0 35 ................................... AACGCACGGGGTTGTGGTTGACGGACTAGGGTTGT 20304 35 100.0 37 ................................... ACACACAGGACCCTAATGGAGCAGCCATAACCTCTTT 20376 35 100.0 45 ................................... TTCCCATAAGTTTGACTTTGCGTTTGCAAAGCCTCTATTGAAGAC 20456 35 100.0 38 ................................... AGAACACTTAAGTCCTCTCTGTACGTGGAGTCATCCTG 20529 35 100.0 36 ................................... GCCATGGCGTTACGCAGGGCAGTGTTTTCCGCGAGT 20600 35 100.0 42 ................................... ACAATACCCAAAAAGGTAAACAGGCAGCCAAGGCCTGTGTAA 20677 35 100.0 41 ................................... TGATCAAGCATGAATGAACATTCAGGAAAACTAGCTACCAT 20753 35 100.0 36 ................................... GCTTTTTCCAAATCAGGACCAATTTTTTCCTCTAAG 20824 35 100.0 40 ................................... TCTTTCCTCTGGGTATAGAGGCGAGAAGCGTATTCCTCGT 20899 35 100.0 36 ................................... GGATAAAGGCAGGGAATCGATGGATCCACTACCTTA 20970 35 100.0 34 ................................... GTCAGCGAGCAGAGGGTGTCCTCTACCTTGTCAT 21039 35 100.0 39 ................................... AATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 21113 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ============================================= ================== 18 35 98.6 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCCAAAAATTGCTCCTTCCAAAAGCGATCGCACTCCCCATCATCAAAATCGCCAAAAAAGTTGCTTCTTCCAAAAGTGATCGCCATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGGCCCTTAAATCTGCGGGTGTTAGTCCATAGGAACAGTTATCAGTTATTAGTTATTAGTTATCAGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATAACCGAGGTGACTATTGCGAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACGGCCTAGTTTTGCAAAGCTAGT # Right flank : CGATACTTAATTAAGAAAAATCAATAAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCCTTTCTAGGTCTTTTCAAGGCCGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTGCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATACAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 747421-746804 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973365.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 747420 35 100.0 39 ................................... GCTCCAGATCAAGGAGCAGAAACCGTTCCAGCTCCAAAA 747346 35 100.0 36 ................................... GCTACTATCCATAGCGGAGGGAGCCGGATTAATCAG 747275 35 100.0 37 ................................... GAAGACAAGAAATTTAAATTAGCCTTGTCAATCTGTG 747203 35 100.0 45 ................................... AATGTGGCACACGATGGAAAAACCTACATTGATGCCTATTCGTTC 747123 35 100.0 33 ................................... GGTTTTGTTTTTTGTTTTCGTACTGTTTGTTTT 747055 35 100.0 37 ................................... GCTGGTTGGTTGGCTGCACTCTGGAAAGTATCCCAAG 746983 35 100.0 37 ................................... TTTACAGAGCCTCCCTTTACTCCAGAAACGTTACTAC 746911 35 100.0 38 ................................... ATAGAAGGTGAAGGTGAAGAATGTTTTAACATTCCCCT 746838 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 9 35 100.0 38 GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Left flank : TCTTGTCCTAGTTTAAAATATCCTGGAACTGTCAAGAATTGGCAAAACGAAGGATTAAGGTCGGAAGTACGGGGAGAAGGTTTAGATTTCCTTTATAGTAGTGGCTTTAAAGGTGTCAATCAAAAAGGAAATGGAAATGCTAATGTTGGCGGACGAATCAGCCGACAAGGAGAAACTGCTTCTACACCTTCTTATGTGTTAATTAAATCTAATTTTCCCCCACAACAGAAACCTTATCAAACAGTAACAATTTTTGGAGTTAACCAGCGCGATCGCGCTACATTTATTCAACAATTAAACTCATTAAACCCTATGCAAATTCAGTAAATTAGCCCGATGCCAACCAACTCAGAGATTTTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGTTGAATGGGATTCCGATGGAAAGTATGCTTTC # Right flank : ACTAGCTTGTCAAAACTAGGCTGTACAAGGATTGTACAACGATTTTTCGTGGGATATTGAAAAGCATAGACATTATTAATAATATTTCTCAATAACTACCTCGGTCATGAGGCTCAAAGCCTTACTGGGCAAAGCATCGACGCACCTCAACGAAAAATATAGATTTTCAGCCATTCTGTCTAACCCGCGAAAAATGTTGAGAACCCCCCCATTCCATCGGCATAAAACAATAGAAATTGTTCCACGTTAATGCCTATGTGATCGGGAGCATATCACCTTTGTATAATTACTCACTGGCATAAATGAGATGCTCCCAGTAGAAATACCTGTCAAGACAACTTGAGTCACAAGAATCCTTCGCTTTGAGCGATGGGAGTGTCAACTTACACCACCATAGCAGCAGACTCTGATAGCTCTGTATTTGTTGCTCAGGGTTGATTTCTCCTCATCTTTTCGGGATTCGCATCAGCACCCCGATTTTTCTTCAGATAGGTTCTAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 755711-756716 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973365.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 755711 35 100.0 41 ................................... AATGATACCGGCGTTAGAGTCCTTAATCCAGTCCGATAAGG 755787 35 100.0 44 ................................... GCCAGGATCCCCTTTTGGAACATCCAGTACCGGATAAAAATTTT 755866 35 100.0 35 ................................... GGGTAGCCCCCCTTGCCTAGGCAAAATTTTGTTCC 755936 35 100.0 33 ................................... AGAGATCATACGAGTGTCAAAATTGACGCTGAG 756004 35 100.0 43 ................................... AAGAAAAGCTCGGCTTAGGGTACTACGATTAGGCATTTTTCTT 756082 35 100.0 38 ................................... ATTCGCAAATGGCGAAAAACCCTCCAAACAAGGCAAAG 756155 35 100.0 44 ................................... GGCAGAGTCGCTGGTCCTTTGTGTAAAAGCCAGGGTTGGTAAAG 756234 35 100.0 39 ................................... TAGCGGGCTTAGGCTCAGGGAAATGCACCAACACAGCTT 756308 35 100.0 44 ................................... GCTTCAGAGCTTAAAGGAGTAACGATTCCTCGGTTGAAACTCAA 756387 35 100.0 40 ................................... AAATATTACCAAGTCGACACACCCTAGGGTGTATCCTAGG 756462 35 100.0 41 ................................... AAAAATAATAATCTGCAGTAGGAAGCTGATTATTTTTAATC 756538 35 97.1 37 T.................................. GGTTTTGTGGGGCCTGTTCTTGCTGGATCTGAATCGT 756610 35 100.0 37 ................................... CATCCAAGTAGGGGCAATTCATGAATTGCCCCTACTG 756682 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================ ================== 14 35 99.8 40 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : CTGGCATAATCATAAATTGCTAAGGCCTCTGTTTAAACTTTATCACGAAAACGAAAATAGTTAAGCAAAATAATTGATTAACTATCGCATCTGACAGGGGGACAAGCTAATAACCTAGAGAGCATCTCATTTATGCAAATGAGTAATTATACTTGTCCCTAAAACTGTTTTCTAGCAAGGTTTTCAATAGCTTGACATAAAAACCTGATTTAGGGGTTACAAAGGTGAGATGCTCCCGATCTCATAGGCATTAACGTGGAACAATTTCTATTGTTTTATGCCGATGGAATGGGGGGGTTCTCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGCTGGGCAAGGCTTTGAGCCTCATGACCGAGGTAGTTATTGAGAAATATTATTAATAATCTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTATACAGCCTAGTTTTGGCAAGCTAGT # Right flank : CCCTTGTTGTTGCAAAGCAAGATACTCGGCTCTTCTAGGTTCTGTGTGAGCATGGTAAGTAGTCGTGCAAAATTAATTTCCTAGTGAAGATAGGCAAGAGGCAAGAGGCAAGAGGCAAGAGCGGGGTTAGATATGTGTAATTAATTTTGCCTAGGTACTTATAATGGCAATACAGAACAGGAGGTGGGTTATGTGGATAAATTTTAATCAACTCCTCGATTTACCAAATGTAACAGGTTCTTCAGTTTGTATTATGCAATGGACAGGATTATAAGGAATGAAACCCTTATAGAGAAAGACGTTTGGCGATTTTTGTCAAGTGTTTTTTATCTAGAGCGAACTAATCAATTAAATCTCTTGCCGGATAAAGATTTAGTCGATTTATGCCCTCTGATCGAACTATACCAAGTAACGAAGAACCATATTTCTGAAACAGTTGAGTTTATTAGTAAAGCCAGACCCGTTTACATCAACGAGGCATAACATCGTTGAGAGAGAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 149959-150527 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973319.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 149959 36 86.1 42 ...A.G.A....AT...................... TAAAAAAGTAGGGCTAATTCCGGAATTAGCCCTACCCTTATC AA,A,T [149966,149976,149981] 150041 36 97.2 37 ...................................T CACTTTTTATCGAATCTAATTCTAGGTGGTGGACAAT 150114 36 100.0 37 .................................... GCAATCGCCTCGGGGTTCGTAATGACCAGAAACCCCA 150187 36 100.0 39 .................................... AGTTTAGAAACGGTATATTTTGACATATAACCGTTCTTT 150262 36 100.0 38 .................................... GCCTCGGAAATTGAGGATAGGGAAGCGTGAAAGGGAAC 150336 36 97.2 42 ........................G........... ATCAAGGCTATTCCCCAATCCGGCTCGACGGTTTCGAGTAGT 150414 36 88.9 42 ...............T....C.........A...C. TAAAAAAGTAGGGCTAATTCCGGAATTAGCCCTACTCTTATT 150492 36 86.1 0 ....T........A.......A........A....G | ========== ====== ====== ====== ==================================== ========================================== ================== 8 36 94.4 40 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Left flank : CGATAATAAAGTCATAGATTTAACTCATGTTCATCCCTTTATCAAAGATGTTCGCACTATTGCTAAAGAATGGATCACCTTACGAGAAAATATCCTCAAAACTCCCGATAATAGTGCTAAGTTGCGAGAAAGTTGGCATCCTAAAAATGTCGAAGTTTGGGGAAAAATTGCCGAAGATAAAGATGATTCTCTAGCCATAAAATGGCTTCACAAAGCCTATCAAAAATTGGATAATTTAAGTATCTATAAAACCTCGGTGACAGGAAGTATCGATCAAATTGGTCGTCTTTGGCATCGAATGTATCCCCTTGTGAAGGTTATCACTACTGAACAGGGCAAAAAAAGACCGAAAGACACCTACAAATATCTAGAATTATTAACAATTTTTCCCGATGACTCTGATGATTGTGCTGATTTTCTAGGTTTTCTAGACGAGAATAATGGTCAAGAGGGAAAATTTCAAAAACTTTGGCCGAAATAATCCCGTTTACAGTTAAGTA # Right flank : GCAGAAAAAGGGTTTCTTTTAGAAACCCTTTTTCTAATAAATTGTGTCAAATATATCTTGACAAAAATCGATAAAAATGCTAGAACCTAACGGCAATCTTCGCTTTATTGCATGAGTAGAAAACGGGTTTCCCCGAGAAACCCGTTTTCTGCGATCGCCAGTCAAGGAAAAACCCGATAATTCAACCTATTCCCTCGGATCAAAATCTGGCAGCGTCCCCAGCTTGCGAATGGTTACTTTAACATCCATAGACAAAAAGTCATCGGCATCACCAAACCAAGAACCAGAAAGAGGAATGATTTGACCGGGATGACGAGCGATCGCCACTCGAATTAAATCAAAGCCGGCGGTAATTTGATTAGTCGGATCATAATTACGCCAACCGGCCCCCGGTAGATAAACCTGTAACCAAGCATGGGTAGCACCAGAGCCAGTCATTCCCACTTCACCACCGTCGAGGGCAGCATCGTAGAGATAGCCACTGACAAAACGACAGGCTA # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 33606-27028 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE973363.1 Microcystis aeruginosa PCC 9807, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================================================== ================== 33605 37 97.3 36 .................G................... TTCGAGCCGGGATGCCAATTCGATAATGCTTTAATT 33532 37 97.3 35 .................G................... ACGAAACAAAAGCAGGGCGGTAAAGGTGGTGGGGG 33460 37 97.3 40 .................G................... GCACCCACGCCTATTTCTATATTGCCACCCCGATAAAAAT 33383 37 97.3 34 .................G................... AGGGTATGGTGTGGATTGAGAGGGTTTATTCGGT 33312 37 97.3 42 .................G................... TAAAAACCAACCTTCAATTAAAGGCGTTCGAGCATTTTCCTG 33233 37 97.3 36 .................G................... TTGTTACTGCGGGCGCTGGCACAGCGAATGTAATTG 33160 37 97.3 37 .................G................... CCAAACGCCAACCTTTTTCGTGAGTATTTCTGCTCAA 33086 37 97.3 39 .................G................... CACGATCCGCTTTACTGCCAATACTTCTATCGCTGGCTA 33010 37 97.3 35 .................G................... CCTTATTTTGCGGCTTTACACCGAAATCAAAAATA 32938 37 97.3 40 .................G................... CAAAAGTAATTATGCCAGTATTAAAATTCACAGACCACCC 32861 37 97.3 35 .................G................... CTTCGCCACCATCACATCGATTTCATCCAAGAAGC 32789 37 97.3 34 .................G................... GGATAGACACTGATCGGATAGACGATATAGAGAC 32718 37 97.3 39 .................G................... AATTCCCTTTTTTCCTTGAGAGAATTGTACTCGGAATTG 32642 37 97.3 34 .................G................... TTACTACACGCAGCCCAATCCAATTGCATCCATG 32571 37 97.3 33 .................G................... TTCACCCTTAAAACTATATCAAAAATTAGCCAT 32501 37 97.3 36 .................G................... TCCTTCGCTTTTGATGAAGCATTATCAAAGGCACAG 32428 37 97.3 37 .................G................... ACAATACTAAAAGTGATAACAGGAAAGGAGACTAATA 32354 37 100.0 35 ..................................... AAGGCTGTAATCTTTCATCCATTAAGAAGGCCTTT 32282 37 100.0 35 ..................................... TTTCCCCCAGCAATTGCCGGGGGGGAACATTTTAA 32210 37 100.0 39 ..................................... CCCTCAGTCCTCATCTCTAAGCCTCTAAGGAGACATCAG 32134 37 100.0 34 ..................................... TGCACTACCTAGGACCGGAACCCCCTTTTTTAGG 32063 37 100.0 35 ..................................... TGGCCAGATTCCCCCTTCCCAGTCTTGCCTTAGTC 31991 37 100.0 35 ..................................... TGATGATAGCTTTGGCTCGAATGTAGAGGCCGCGA 31919 37 100.0 35 ..................................... GGGTCATTGAGAAAAGTCTCACGATTTGTGGATCC 31847 37 100.0 34 ..................................... TCCTGATTTTTCTAGGATGAGACAAGGATGTGAC 31776 37 100.0 35 ..................................... AAAATACTTAATCTCAATTTGAGTGGGAAGATCAG 31704 37 97.3 36 .................G................... AGTACCCTCCACCCTTTCTTTTTGGACAACATCTCT 31631 37 97.3 36 .................G................... GGTTAATTTACTCGATCGAGCTTTATGGCGATCCGA 31558 37 97.3 35 .................G................... CAAACTCTTCAAGCCGTGTAACACAAGCTTGAAAG 31486 37 97.3 36 .................G................... CTAAAAGTAGCTCCCCCGCCAAAAATATCAAAAATA 31413 37 97.3 40 .................G................... AGCCAATTCAGCGCTCCCATGTCAGCATTATCAATTTCTA 31336 37 97.3 34 .................G................... ATTATAGAAATGGAGGAACTTTAGGGGAAAAATA 31265 37 97.3 34 .................G................... TTATTGCTAATAGCCAAGAAGGACAAGAAAAATT 31194 37 97.3 35 .................G................... GCGCTACTTCAACGGAAAAAGCTCTATTTCCGAAA 31122 37 97.3 34 .................G................... TATTCCTATTTATATCAATTCACCATCAGAACGA 31051 37 97.3 34 .................G................... CGATTCCTTCACCACCACCGGCATCAGGCGCTTC 30980 37 97.3 35 .................G................... GCATTGCTTAACTGACAATAAAGAAACTCTCCATC 30908 37 97.3 35 .................G................... CATGGAGGCTCTTGCCCGCGAAGCAGGATTTAAGA 30836 37 97.3 41 .................G................... ATGGTGTCCCTGCGTGAGGTATCCCACCATCCCAGCAGTTT 30758 37 97.3 36 .................G................... CTTGTACTGAATATCGCCTATACCCCACTTCCAATC 30685 37 97.3 35 .................G................... ATTAAATTTTGGATGGACAAAATAAAAAGCGTGGA 30613 37 97.3 35 .................G................... AAAGTAAACCGATTTACTATCTCAAGAGAGAATCT 30541 37 100.0 34 ..................................... TGCTAATTGCACAGCCTATTAAGCTACATGATTG 30470 37 100.0 35 ..................................... TTTTCCATGAAGCATTCATCCATGCGATCGTCTCT 30398 37 100.0 35 ..................................... GTTTATCATCGGACAGAACGCGAAATTCGAGGGAC 30326 37 100.0 35 ..................................... TGACTGGTGCGTAGGCGGGTCCTGGATAGTGACAT 30254 37 100.0 33 ..................................... AGAAGGATTAGGCATTGTACAGCAAGAAATCAG 30184 37 100.0 34 ..................................... AGAAGGATTAGGCATTGTACAGCAAGAAATCAGC 30113 37 100.0 36 ..................................... AACCCCCTGTTTACTTATTTGTTTACACTATCTTTA 30040 37 100.0 34 ..................................... CAAAAGGCGATCCCGGGAAGGACGGGAAACCCGG 29969 37 100.0 43 ..................................... ATGCCTAGTGCTTGCCTGATCTGCTTCAAAGGATTTTCTTTAA 29889 37 100.0 34 ..................................... TCATCTCACCCCCCCCCATAGGGGGTAAATTCTC 29818 37 100.0 35 ..................................... TTCTACCCAGCAATCACCGGGGGGGAGTATAATGA 29746 37 100.0 36 ..................................... CGGACTATGGCGAGCGTAAACTCCCTGCTTACTTAC 29673 37 100.0 35 ..................................... TCTTAAGAACCCGTTTATACCTCTTTAGGAGTAAC 29601 37 100.0 35 ..................................... TCTTTTGCTAAGACAGACTCCCGGCGCTCGCTATT 29529 37 100.0 36 ..................................... GGTTTGTTCGTGGGGTTACATGAAAGGGATTGTCGA 29456 37 100.0 34 ..................................... GTCAGAGATTTGATAGGCACTGTTTTTACTCCTA 29385 37 100.0 36 ..................................... ATCTAAAAAAGAAGAGTTAGGAGATATTTTTGAAGT 29312 37 100.0 37 ..................................... ATAGGTATCGAACCACCACTCGTTACCAGTTTGCTGA 29238 37 100.0 35 ..................................... TGGCAGTCTTGCCTTGACTATTCACCAAATACCCT 29166 37 100.0 35 ..................................... TAACCAATACCATGCCTAGTGATACTGATCTTTTT 29094 37 100.0 37 ..................................... TTCCAGTCTCACAATGTAATTGGTGAGGCGATCGATC 29020 37 100.0 35 ..................................... CGCTTTTTCTTTTGTACAAATTCGACCTGCTTGTA 28948 37 100.0 37 ..................................... ACGGGTTCTTAGAGACCAGCTTGAGGTGACGAAACAG 28874 37 100.0 33 ..................................... GTACTGCAAAACTTTAGAAAAAATTGCCAGACT 28804 37 100.0 34 ..................................... AATTTATCTTTACAGATGAAGAAGGAGTTGCAGA 28733 37 100.0 43 ..................................... CTTGAAATAGTTCATCGCAAAGAGAGAGATAATCCTGTTCCAA 28653 37 100.0 34 ..................................... TATAAAATGGCACTTTTAACCTTATTCTCCAATT 28582 37 100.0 34 ..................................... TCTTGTTTGCTCATTGGTATTAATCCTTAATCTT 28511 37 100.0 34 ..................................... CCCACAGCTATTATTACAGCCGAAACACCAGAAC 28440 37 100.0 35 ..................................... GTGATAAAATCTAGTTCTTTCAAGAAATAATTCAT 28368 37 100.0 35 ..................................... AAAAGCGAAGCAATCGAGACTAACAAGCAACTTGA 28296 37 100.0 35 ..................................... AGTGTGAGCATAAATATTCACGGAAAACCAGAAGA 28224 37 100.0 36 ..................................... AAAGAAATAGCAAAACCAATGTATGACACTTTTATT 28151 37 100.0 39 ..................................... AAGCTCACGAATTTCTTTAATAGTTTTTTCAACGTCAAA 28075 37 97.3 35 .................G................... AGAGTCGGAAGGTTAATTAGGTTTGGGCATTCTTG 28003 37 97.3 36 .................G................... CGATCAGTGAGGTGAAAAAAAATTGCTGCCAACCAA 27930 37 97.3 39 .................G................... TGGATTTAGCAATTAATCAAGCTAAAGACTTACTAAATG 27854 37 97.3 37 .................G................... CATAATTTTCTAGATATTCAGAAATATCTAGTCTCGT 27780 37 94.6 35 .................G.................C. ATATAAGTTTTACTTATATACTACAAACCTTATTT 27708 37 97.3 41 .................G................... GGCCTAATAAATCCATATCGTAAAGTAAAGCGCGTCGCCTT 27630 37 97.3 35 .................G................... CGCTCGGAAACATAGTTCTTACCGTTATCCGTTTT 27558 37 97.3 230 .................G................... ATTTAGTTGTTCGGACTACAGCCCTTGATTTTAGGTTCTTCGGTTTGTCTTATGCAATCGACGGGGTTATAAGGAATGAAACCCTTATAGAGACAGACATTGCCGCAATTTTTGTCAATTGTTTGCGATCTGGAGCGAACTAATCAATTAAATCTCTTGCCAGATAAGGATTTAGTCGATTTATGCCCCCCTATCGAACCATACCAAGTAACGAAGAGCCTGATTTTATT 27291 37 97.3 38 .................G................... TCATGAACCGAATATTGTGCCTTATGTTGTTCCTGAGT 27216 37 97.3 43 ....................T................ TTTACTTGACATTTCTAGTAGGGTTATGGTAGATTTAAGTTAG 27136 37 100.0 35 ..................................... GAAGTCTTGACACTGAGCGAAGTCGAACCCTTCGG 27064 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================================================== ================== 88 37 98.7 38 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTATCAGTTACGATATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCTATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTTTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCCGGGTAGCTGTAAAAATCCTTAACTATTATGTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGTGAGGCGCACCTTATCCCGTAAGGTTTTGCGGGTTCTTGAAGAAGTGGGTCACTTGTTGTACAATGGGTTTATTGCGGGTGCGGCGCAACGGAACCTTGAAAACCCCATAGCGTATGGCTTTTACCACTGGGCG # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATATGCTTATTGTTCCTCACTCTATTGTTATTCCAATTAATGTTAATCCCTATTAGGGATTGAAACACCCTAAAGATTCAACGGCATTAGAAGCGATTATCGCGCCAATTCAGACTTGAATTGGCGTTTTTGTTCAGAATTTAAGTGATTAGGGGCTGACCTAGATAGGGCTGGCTGAATAATGGTAAAACCCTTTTAAAATAAGGCTTTTGACCTGTTAAAATCCGATGTTCATGCTGCGAAAATAGGATTGGGACATTCAAAAACCTGGCATTATTCTTTTGATAGTACATAAACTGGTATAAAAAAAAAGAAGGGCAACAAAGCCTGAAACGACCGACGACCGGCTACTGACGACCGGCTACTGACTCCTAACCCCATCAACAAACTTTTTCA # Questionable array : NO Score: 8.73 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.20, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAGCCCTATTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //