Array 1 8983655-8981247 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIN01000001.1 Streptomyces sp. SID5469 SID5469.c1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8983654 29 100.0 32 ............................. CGGCGGCAGCAGCAGCCGAGCGGGCCGTGAGC 8983593 29 100.0 32 ............................. CGGTCCGTAACTGGCAGAAGCGTTGCTCGGTG 8983532 29 100.0 32 ............................. CCTGTACTACGCAGGCTGGAATGCGGGCATCG 8983471 29 100.0 32 ............................. GAGCTCCCGTGAATGCTACCGCTTTAGCACCT 8983410 29 100.0 32 ............................. CGGACACCACCAACGTCCACGGCATCGCGAAC 8983349 29 100.0 32 ............................. ACGGCCATCACCCTGATCTGGGTCACCGTCTC 8983288 29 100.0 32 ............................. CTGAACATCTCCAACTGGCAGTCGCAGATCGA 8983227 29 100.0 32 ............................. CTGGGCGATCTGCTGCTCTAGGTCCGGTACAG 8983166 29 100.0 32 ............................. GTCCACCGGCAGGACCGTGCACGGGATGGATG 8983105 29 100.0 32 ............................. TCGCTGCCCGCGTTGAGCTCGGCCGTCGTCGG 8983044 29 100.0 32 ............................. CCACCGAAGCCCTTGGCGCTGGCCAGCTTGGC 8982983 29 100.0 32 ............................. GCTTCGGCGTCGACACCTACCGCCTGTCGACC 8982922 29 100.0 32 ............................. GCTTCAGGTCTCGGCCAGACCACACTGTCGGT 8982861 29 100.0 32 ............................. CACTGTCCGAGCCCCTCGCGAGCTGAAGCGGG 8982800 29 100.0 32 ............................. TCGTCACGGACCTTCTTTGCGTGGCGGCTGGC 8982739 29 100.0 32 ............................. TCGATGAAATTGGTTCCGCCCGTTACCGAGAC 8982678 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 8982617 29 100.0 32 ............................. TCCCCGTTCTTGTCTAGCCAGCCCTCACTGTC 8982556 29 100.0 32 ............................. ATCTGCGAGCCCTCGACGGAGCAGCGGCCCAT 8982495 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 8982434 29 100.0 32 ............................. TTGGCGGGCGGCTTCGGTGCGGAGGTCTTCGT 8982373 29 100.0 32 ............................. CTCGCAGCTACACGGCGGGGCCCGAAACGGGA 8982312 29 100.0 32 ............................. TCGAGGGCGGCCATGCGCTGGAGGTGCCAGGG 8982251 29 100.0 32 ............................. TTCGGGTTCCGGCCGAGGCTCTGGTGCCAGTA 8982190 29 100.0 32 ............................. ACGCACCAGCTTCTCGTGCGGCCGGACACCCC 8982129 29 100.0 32 ............................. TGCAGGACGGCTTGCTCGACGAGGAAGCGGTC 8982068 29 100.0 32 ............................. TGGGGCTCCGTCTCCAGGGACGACAACGGCCA 8982007 29 100.0 32 ............................. CTCGCCGACGGCTTCGAGGTCTCGGTGCCGCA 8981946 29 100.0 32 ............................. CCGGCGCGCTGGCGTTCCTGCAAGACGAGAAG 8981885 29 100.0 32 ............................. ACGGAGCTGCGGGCAGAGCTGACAGCGACGAA 8981824 29 100.0 32 ............................. TGGGTGATGCTCTCGTCGATGCCGAGGATGAG 8981763 29 100.0 32 ............................. CCGTTCCCCTGGATCCAGCGCGGTGAGGTCCA 8981702 29 100.0 32 ............................. ACGGTCGGCCAGCAGTTGCGGCGCGACCCGTT 8981641 29 100.0 32 ............................. CCGAGGAAGCCGAAGGCGCCGACTTCGCCATG 8981580 29 96.6 32 ..G.......................... GCCGTCACCACCACGAACCGGAAGCTCACTTC 8981519 29 96.6 32 ..G.......................... TAGTCCCGCCTCCAGGCCCCGCCCTGAGCCGC 8981458 29 93.1 32 ..G..............A........... TAGTGCGTGCCAGTCGACACCGAACTCAGGGT 8981397 29 93.1 32 ..G......................A... CGCCGCGCCGTGGCTTCTTCGTTCGGCCGGCC 8981336 29 86.2 32 ..G..........A......A..T..... TGCTTCCCGATCAGCGAGGGCGGGAAGCGGGC 8981275 29 86.2 0 ..G................G...A.T... | ========== ====== ====== ====== ============================= ================================ ================== 40 29 98.8 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCGCATCGTCGGCGACATCCAGGAGCTCCTCGGCCTCGGCTCCGCCTACGACATCCCCGATCCGGAAGAACAGCTCGTCGATCTATGGGACCCCATTTCCGGACCAGTCCCCGGTGGCATGAACCACGGGACGGATACATGACCACACAGAAGAGGGAACACACTCAGTGGCCTCAATGATCGTGCTCTCCGCCACCGCCGTCCCCGACCACCTCCGCGGAGCACTCACACGCTGGTTGTTGGAAGCCACCCCAGAGCTGTACATCGGAACCGTGTCCGCCCGTGTCCGCGACGAATTATGGACTGCGGTCGCCGCATGCACTGGTGACGGCATGTCGGTCCTTGCCTACCCCAGCGACAACGAGCAAGGCTTCGAGCTCCGCACTGCAGGATCCCGCCGCCGCCACCCCGTCGAATTCGACGGCCTCACCCTGATCGCCTTCAATCGAGAAGATAAAGAAAAGGCAAACCCCCTGTAGAAACGCAGGTCAGGAAGG # Right flank : ATGGCCAAGGGCGCCGAAGAGATCCGCGGCAAGTCGTCCCCGCGCCCACAGGGGCAGCTCCGCCAGGGACGCCATCGGCCGGGCTGGCAGTCCTCATGCCGCTGCCTGGCGGTGTCCTCCACTCGAAGGTCATGCGCTCATCTGCCCAAGTTGCAAGGCAGTTGATGCCTCTAGTGGCGTCGGACATCGACGTAGCGACCTCGCTTACGCCGCGTCAACCGACACCCCGCCTGCGGCCGGCCGCAGGCGGACAGCGTGCAGTTCGCCCAAGCGCCAGCGAAGGAGGAACTCGACGGTACGGCGGCCCGCCGCGTCTGCAGCCTCTTCCGCACCGCGGCCGCGGTGCCGCAGGCACGCCTCATACGCGGCGTCGGCCTCGACCACCACATCCTCCGCCCCCAGCAGCCGGCGCAGCGCCGCCGCGCGCCGTTCGTCCCGGATCTGTTGCGCCACCTGCGGCGCGTAGAACGCGACCAGAGCCGGATCGGCGTCCGGACCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8993350-8996981 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIN01000001.1 Streptomyces sp. SID5469 SID5469.c1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 8993350 30 96.7 31 .............................A CACGGCTGTTGAGCCGGACGGCGCCGAGACC 8993411 30 100.0 31 .............................. CCCGATCGAGGGCGGTGTGAGCATGAGTATC 8993472 30 96.7 31 .............................A CGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 8993533 30 96.7 31 .............................C AGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 8993594 30 96.7 31 .............................C CCCATGATGATTTGGCCAGGCACCCGAACCA 8993655 30 93.3 31 ............................CC ACTAACTCAAGACGCAATGATCACAATCGGA 8993716 30 100.0 31 .............................. CGATGATGCCGGCGTCGACGGCGATGGGGAA 8993777 30 96.7 31 .............................T CGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 8993838 30 96.7 31 .............................C CGCCCGCGCCGCACTCATCCCCGACCAGGCG 8993899 30 96.7 31 .............................C CCGTGAGCAGCCGACGTTCGGTGACCGGGGG 8993960 30 96.7 31 .............................C CGTCGATGAGCGCCTAGCCTTGCTGGAACGA 8994021 30 96.7 31 .............................T CCATGCAGCACCGCGGCGACCGCCACCCCCC 8994082 30 96.7 31 .............................T TGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 8994143 30 100.0 31 .............................. AGAACTACGACGAGATGGCCAAGAAGACCGT 8994204 30 96.7 31 .............................A ACGACACGGCCGCCTTCAGCCCGCCCCAGAC 8994265 30 96.7 31 .............................C CGCCCGCACCACTGACGTGCGACGAGTGCGG 8994326 30 100.0 31 .............................. CGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 8994387 30 96.7 31 .............................T CCACCACGCGCTCCAGGAAGCTGGTCCCCTC 8994448 30 96.7 31 ............................T. GGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 8994509 30 96.7 31 .............................C TCGGCAAGTCCGGCGCCGACGCCCTCTACGA 8994570 30 96.7 31 .............................C GCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 8994631 30 96.7 31 .............................C AAGCGCGGTGTACACGATGTGGGGGTGGATC 8994692 30 100.0 31 .............................. TCCGCGCGGACCCGGGCGTCGGTGTCGACGC 8994753 30 96.7 31 .............................C AGTTCGGCAGCCTCCTCGGCGACATCTTCGG 8994814 30 96.7 31 .............................T GTGACGCCTGCCCCATCGCCAACGCGACGCC 8994875 30 93.3 31 ............................TT CTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 8994936 30 100.0 31 .............................. CCCGCACCTGCAGACGTACGTCCAGTCCAAC 8994997 30 96.7 31 .............................T CCTGGGACGCCCTCAAGGTCCCGAACGTCTG 8995058 30 100.0 31 .............................. TGGGGGAGGCTGCGGAGGCGCAGACCACGTT 8995119 30 96.7 31 .............................T ACGCGTGGGGCGGCATCCTGGTGCGCACCTC 8995180 30 100.0 31 .............................. CTGCCATCGAGTCATCCCCTGCGACCCCGGG 8995241 30 96.7 31 ..T........................... TTTCGTACCCGAGGGCCGGGCCGATGATGGT 8995302 30 100.0 31 .............................. ACATGATCGCAGCCCGATTCCTGCGGCAGGA 8995363 30 96.7 31 .............................T CCACGGACGGCAACTGATCCCCGGCATGAAC 8995424 30 100.0 31 .............................. TCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 8995485 30 96.7 31 .............................C CTGACCGGCTGGCGTTCCAGGCGACGTCGAC 8995546 30 96.7 31 .............................T ACGCCATCGCCTGGCGTAACGCGCTCCTCAC 8995607 30 96.7 31 .............................A CCGTCACGTTCGACACGCGGGTCGGGTTGTA 8995668 30 93.3 31 ............T..A.............. ACATCCACGGCAACCCGCTGAAGCTGACCCG 8995729 30 96.7 31 .............................A AAACCGGGCGCGCCGTGCAACCTGACGGCCC 8995790 30 96.7 31 .............................A TCAGCAGCATCGCCAAGGCCATCGTGGCGGG 8995851 30 100.0 31 .............................. AGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 8995912 30 96.7 33 .............................T CCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 8995975 30 100.0 31 .............................. CCCTCAACAGGCCGTCAACCGAGCACGCCAA 8996036 30 96.7 31 .............................A CGGACAAGGGCATCACCGTCCTTTTCACCTC 8996097 30 100.0 31 .............................. AGACCCTTGCGAAGACCAGGCGTGCCAGTGC 8996158 30 96.7 31 .............................T CGCGGTGCCGCCACAGCGACGGTCGGGCGCC 8996219 30 93.3 31 ............T................C TGATGCTCGACATCGCGAAGGGCATGCAGGC 8996280 30 100.0 31 .............................. CCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 8996341 30 100.0 31 .............................. CCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 8996402 30 96.7 31 .............................T CGGACACCGAGGTCAGCGCGTGGCTGCTGTC 8996463 30 96.7 31 .............................C CACCGGGGACGTAGCCGACGTCCGCCGCCCC 8996524 30 93.3 31 ............T................T CGGAGCTGGCCAGGGAGCTGACCACCCGGGT 8996585 30 93.3 31 ..........T..................C TTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 8996646 30 90.0 31 ...........A.......T.........A AGCCGGAGACCGAGCAGCAGGACCAGCCTCA 8996707 30 93.3 32 .............C...............T ACTGGATCTTCCCCGTCCGTGACGAGCACGGG 8996769 30 93.3 31 ......C......................C CATGGTGATCTACCACAGCGAACTTGCGGGC 8996830 30 100.0 31 .............................. TCCGCCTCGACGGTCTGCACCGGGCGAAGAT 8996891 30 93.3 31 ...T.........................T ACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 8996952 30 93.3 0 ......................C......A | ========== ====== ====== ====== ============================== ================================= ================== 60 30 96.9 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : TCGTTCCGTACGGCCGCGAACGCCTCCGGAACCTGGGCCTGAAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGCCAGCACCCGCCGAGCCTCGGCCACCGTCAGCCCCAGCGCCCGTGCGACCTTCTCACGCATTTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACTCCCGCGGTGTCCAGCAGATGGCAGAGCACTGGGTACGGGCGCGGAAGACCATGCTCCTTGCCCCAAAACCGGGTGTCGACCGGGACATGTCCCGGCGAGACGGACTCACGCTTCATCATGACAGCCATGCATAACAGCCCCCACTGACAACGCATCCTCACCTGCACGGATACCAGAACAGATCCCAAGCAGGGCCGTAGAATCCAAGCCGTGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCAAAGCACCTGAAGGAGGCCAGGTCAGGAAGG # Right flank : ACGAAGACGCTTGTCGGCGACGCTTGAAATGTGGCTCAGTCAAGATTTCCGTGAAGCCGATCGTGCGCCTGTGCGCCGGTGACGCTCCGTCACAGGCCGCGTGATACTCGCCGAGTGTGGGGAGCTGCTGAAGACCATGTTTCCGCACCTCGAAGGGGTGCTGGTGGAAGAAGTGAGCCCCGAGGGTGGGGTGTTGCACATTGTGGCAAGAACCGTGGAGTCGGTTCCGGTGCCGTGCCCGGACTGCGCAACGCCCTCGGTGCGACGGCACAGCGGATACCAGCGCCGTCTCGCCGACGGTGCGGTCGGCGGCCGTCAGGTGTCCATCGAGCTGACCGTCCGCCGCCTGTTCTGCGACGACCAGAGATGTGCACGGGTGACCTTTGCCGAGCAGGTCGACGGGCTGACCGTGCGGTATGGGCGTCGGACGCCGCAGCTGCGGTGCTTGTTGAGCGCGATCGCGGTGGCCCTGGCCGGCCGGGCCGGAGAGCGCCTCGCGG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 9002720-9003054 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIN01000001.1 Streptomyces sp. SID5469 SID5469.c1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 9002720 30 100.0 31 .............................. ACGCCGACCGAACCGTCATGCTGACCGTGGA 9002781 30 100.0 31 .............................. CCACCGTGGATATCAAGCTGGCCGAGCGGAA 9002842 30 96.7 31 .............................T GGCGCCAGCCGATGGCCGTGCGCTCACCGTC 9002903 30 100.0 31 .............................. ACGGGGACACGCTTCGCGTGATGCTGGACCA 9002964 30 100.0 31 .............................. CGGACAACGAGGTGCGGGACGGGATCCGGTC 9003025 30 93.3 0 .....................A.......A | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : GGCCCGGCCGGCCAGGGCCACCGCGATCGCGCTCAACAAGCACCGCAGCTGCGGCGTCCGACGCCCATACCGCACGGTCAGCCCGTCGACCTGCTCGGCAAAGGTCACCCGTGCACATCTCTGGTCGTCGCAGAACAGGCGGCGGACGGTCAGCTCGATGGACACCTGACGGCCGCCGACCGCACCGTCGGCGAGACGGCGCTGGTATCCGCTGTGCCGTCGCACCGAGGGCGTTGCGCAGTCCGGGCACGGCACCGGAACCGACTCCACGGTTCTTGCCACAATGTGCAACACCCCACCCTCGGGGCTCACTTCTTCCACCAGCACCCCTTCGAGGTGCGGAAACATGGTCTTCAGCAGCTCCCCACACTCGGCGAGTATCACGCGGCCTGTGACGGAGCGTCACCGGCGCACAGGCGCACGATCGGCTTCACGGAAATCTTGACTGAGCCACTTTTCAGCCGTCGCCGACAGACGCTGGCACTCGGGACTGAGACGGG # Right flank : ACCGGCCAGGAAGCAGAGGGTGATGACATTCGGTTCGGTCCTCGCCACCATGGCCGTGCTCGCGGTGGCCGCCGCACCGAACCTGTACGCGACCAGCACAACGAGCCACGCCGCCTTGGCCCAGGCGTAGGGCGTCTCGAAGACGACCATGGGCCGCGCGATCCGGCGCGAGAACTGGAAGCACGTGGACTGATCCGCTCATGGCCAAGTCGTCTTTCGTGGGCGCTGGTAGTCCACGGAGTACACCCGGGACGGACGCGAGAGCCGGCCTGGGTTGACGGTGGTCAGGAACAGGTCGGCCAGGGGCAGGCCGGTGAGGCCGGAGCTGTAGAGCAGGGTTGGGTCCGGCATCTCCATCTCGACGCCCTGAGGTCGGACGGCACCTGCGGGAACTGCGCGAGGACGTGCGCCGGGCGGGCGGGGCGCGTGCGGCGGCCGACGCGGTGGAGCGTCTGCTGACGCGCCGGCAGGCCGGGGAGGCTCAGCCGCTGGGCGGAGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //