Array 1 77710-75790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOSK01000076.1 Escherichia coli 1-392-07_S4_C1 e139207S4C1.contig.75_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 77709 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 77648 29 100.0 32 ............................. AAAACAGCCTTTAGATTAGTCCCTGACGACCG 77587 29 96.6 32 ....C........................ TAAACGCACCTGGCGCGCCACTTTATCAACAA 77526 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 77465 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 77404 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 77343 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 77282 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 77221 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 77160 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 77099 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 77038 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 76977 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 76916 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 76855 29 96.6 32 ....C........................ ATCCGGCTATATCTTTGAGCATTACAGAAATA 76794 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 76733 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 76672 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 76611 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 76550 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 76489 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 76428 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 76367 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 76306 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 76245 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 76184 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 76123 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 76062 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 76001 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 75940 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 75879 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 75818 29 89.7 0 .A..C.......................A | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //