Array 1 8987-9321 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGA01000011.1 Rhizobium sp. FKY42 NODE_13_length_66655_cov_187.110886, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 8987 30 100.0 31 .............................. CGGCTTGCTGGCTGGCAGCGCCTATGGCGCA 9048 30 100.0 31 .............................. CACGCCTGAAGGCGGCGTCATAAGGTTGTCA 9109 30 100.0 31 .............................. TGGGACGAAGCCGAGGCTCGCGAACAAGGCA 9170 30 100.0 31 .............................. GCCTTGAACACCATGCGCAGCATCTCGCGAT 9231 30 96.7 31 C............................. TCGACCGGATCGACAGGGCTTTCGCCTTCGA 9292 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 99.5 31 AGGTTCCTCCGCACTCGCGGAGATAGACCC # Left flank : GTGGAACGCTTGACCCGACAACGCGCGGCAAAGCTTTTCCGCCAGCGAGACGTTATTCCCACAATGATAGACCGGATCAAGCTTCTTGTCGGACCCGAAGCAGACCAGACCGGCGCCCCGAACGAGGACGACGACTAATGCCGATGGTGGTGATTATGACGCGTGATGTGGAAGCCCGCTATCGAGGCTTTCTTGGATCGATAATGCTGGAGCTATCGGCCGGCGTTTATGCGCACCCCCGCATGAGCGCCGGCGTTCGAAACCGCATATGGGATGTCATGATGGATTGGCATGGCCAGCTGCGGCAGGGCAGTATCGTCATGACCTGGGCCGATAGCGCCGCCCATGGTGGCCTTGGATTGTCCACCCTTGGCGAGCCACCCAAGCAGATTGTAGCGCATGATGCGATGCTGCTGGTGAGGCGTCCTCTTGCAAACGTCAACCCCTGATCGTTGACTGCTCTTTGACATTGTCCAGATAATCAGGCACTTAGAGGCAAG # Right flank : CGATGGGAAGCTCATGCGTCCGGCTTCGACCGGAATACCCAAACCATGTCTGGTCTTACGACCTCGTCGAGGATCGTACATACAACGGCAGGAAAATCCGCATGCTCGATGTGATCGACGTGCTTTCTGACCTGTTTATCCTGCGCGGCATCCCCACCCATATTCGTTCCGACAACGGCCCGGAATGCATCGCCAAGGCGTTGCGTGAATGGATCGCGACGGTGGGAGCCAAGACCGCCTACATCATGCCGGCCAGCCCGCAAGTTCGGTCCCAGCTGATTGGCGTGCTTGGACGAACAGTCTATCTCGCTCTTTACTCCCTTGCCTCGACGCTTGTGCTCATCTGGCTTTTCGCCTTGGACCTGAAAATAGACTATGTCGAGCTATGGCCGCCTGCCGCGTGGCAGGCGGCAGTCAATTTTGTGCTTTCTACCATCGGTCTGTTTCTGGTGATTGCGGGCCTTCTCAGCCCCAACCGCTATTCAGTCACCTTGCGAAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTCCTCCGCACTCGCGGAGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 93355-92894 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGA01000016.1 Rhizobium sp. FKY42 NODE_18_length_121770_cov_212.675339, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 93354 37 100.0 31 ..................................... GTGCCATAGGGTTCTCCTCTTGTTGGCAACT 93286 37 100.0 34 ..................................... GATGCTCCTTGTGGGGTTAAACCCCCTATCATAC 93215 37 100.0 41 ..................................... ATGTGTCATGCGGCGAACCTCCTTAGTTAAGCGCCTGCAAC 93137 37 100.0 33 ..................................... CCAAGCGGGCGGGGGGTTACGGCAAGGCCGCTT 93067 37 100.0 32 ..................................... GCTCCTTTCTTCGGAGGGTTCGCGTTGCGGAT 92998 37 100.0 31 ..................................... CTGTAGGTTCTCGGCGGTGTCTCGTATGGGT 92930 37 94.6 0 ...................................TT | ========== ====== ====== ====== ===================================== ========================================= ================== 7 37 99.2 34 GTTCGGAACGACGGCCATTTTGACGGCCGACTGCACC # Left flank : GAGGCGTAGTTCCTATGAGCCGTTATCAGCAGCTACGAGTGTTCTGCTACGATGTGTCCGACGACAGGCGGCGCCGAAGGGTTGCGAAACTGTTGGAGGAGGAAGCGGTCCGGGTTCAGTATTCTGTGTTTGAAGCGCGAATGAGTGACCGCGCCTCTGCCCGCCTCGCAGCATCCATAGAAGCCGTGCTTGCGGAGAGTGATAGCTTGCGAGTCTACACGATCGGTCGATCCGGTGAGACGAAATGCGACGTAAGAGGCGCCGGGGTACCCATTGAAACGAGTACCGGCTTTTGGATGATGTGAACCAGAACCACGACTTCTGTTGAGCCTAGAGGATGAAATTTGCCTCAGAATTAAATAACAACTTGGAATACAAGAGATTTTTGCGCAAATTCTCACGCTTAGTGAGTGGAATTGGTCGATAACTTGCCTGTTTGCTTTCAGTCTCAGGTTTGTATGCACTTGCGGCAGTATCATCAATGCGTTATCGCATATGGT # Right flank : GCAATTCGCCTCATCAAGCTTCTTCGAGGCAGACGGGTAGTAAATCACAATGTTCGTGTTCAGAATTAAATTTGAGGCAACTTGACAAACATACCTGGCGATGTCCGATTGACCGTAACGATGGAGCAAAGTTTTCTACCCTCTGTTCTCGCGAGATTTCTTCATGGATGGGCAAGCCGGAGAAGCGCTGTTTTTTAGTACCAAGATCGTGTTTGGCAGGCAGAAACCCGGTGAGTTTATACCGCGCCAAGTGGAGGTTGGGATAGGAGATCGACCGGGACTCGTCGGTGACTGCTTATCGCTGAATCACAAGGTCCCTGATGCACCATTGCGATCGGCAACGGAGTTCGTCGCACGAGCAAGCGAGGACGATCTCAATTCGTGGCGGGCCGCAATTCCATTGTTTGGTGCCGAGAAACCGTTTTCTGGATTGACCATAGCTGTTGAGGATGCATCTCCAGACACATGTCTTGCCCTTTACTGCTTAAAGGAACGATTGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGGAACGACGGCCATTTTGACGGCCGACTGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 96204-95889 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGA01000016.1 Rhizobium sp. FKY42 NODE_18_length_121770_cov_212.675339, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 96203 37 100.0 32 ..................................... GTGTCTCCTTTAAAAACGTGTCAGTGTATTTC 96134 37 100.0 30 ..................................... AGAAACGCAAGAGGCCCAACGCCCTTTGCT 96067 37 100.0 33 ..................................... CCCTGTGGAAAGTGCCCTGTGGGCGGTTGAATT 95997 37 100.0 33 ..................................... CCTCTCCTGCGGTACGTGTGAAGATAAATCAGT 95927 37 91.9 0 .................................GT.T | G,A [95891,95893] ========== ====== ====== ====== ===================================== ================================= ================== 5 37 98.4 32 GTTCGGCACGAGGGCCATTTTGAAGGCCCACTGCACC # Left flank : GAAGGTTTGGAGATCACCTGGACGCTGGGCCATGAACGGTTGCGAAAGGCCCGTGTGGCACCGCGCCTCATGCCGCATCTTGAATTTCTGCCGCGTGACCTTGATGACTGCCGCTTCGCACTGCCACGTGTCTCGGCGCGATATGCATCAATGGTCAAAGCCTTGTTCGACCATGACCATGGTGGGAACCGGACAAGAGAGAAGACTGGAAAGAAAGATAAGGATGACAAGGACATCTACGCCGCGCGCGGCCCCTTGAAATATCCGGCGTTCCCAAAGGAAAGCCGCGTACCGCCTGAAATCGGCAGTTGGAGTGCCTATCACGGTAGGGATAAGGCCTGATTAGCCTCAGAAATCATGCAAGACGCAGATTTTGTTGTCGTTTTTTGACCGAGTGTGGAGCTGAAGTTCGAGGATATGGAGCTGAAATTTAGCTTGTGGCATCAGCCTTCGAAATATCGTCTGATTGACAAAGCTTTCCATTGCTTTACCGATAGGCA # Right flank : TGCGCCTTGATGTTGGCCTTGGCATTCTGGTCCAATTGGCAAATTTGATATTCCTGAAGGGCATTGATGGACACTTCCGGACCGGACCTCTGGTCGCACATCACTTCGATGGAAGCTCTGCAAGAGGCCTGGGCGCGCGTGGCCATGAACGAGGGCGGTCCGGGCGGTGATGGCATCAGTCTGGAGGAATTCCGGCGTGATCTTTTCGGCAATCTGACGCAATTGCGGGCCGATCTTCTGGCGGGTTCCTGGCGGCCGCTGCCGCACAGAAAGGTAGCAATACCAAAAAAGAAGCCGGGATATCGTGTTCTGACCATCCCCTCCATCCGCGACCGAGTGTTGCATACAGCCATCGCTCAGGCGCTCACGCCCGTGCTTGAGCCGATGTTTGAAGATGGCTCGTTTGCTTACCGTCCGGGCCGAGGCGTGCAGGATGCGGTGCGCCGCATCGAACATTGGCGCAACCGCGGCTATTCAATCGTCATCGAGGCCGACATCGT # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGGCACGAGGGCCATTTTGAAGGCCCACTGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.10,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //