Array 1 320513-322066 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEZH01000001.1 Streptococcus mutans strain UA140 UA140_NODE_1_length_637469_cov_147.642, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 320513 36 100.0 30 .................................... CCCCTTAATAGAAGCACGTTTTAAACGTTC 320579 36 100.0 30 .................................... GCAATTCAGTTTCATCCCATGGGAGCAACA 320645 36 100.0 30 .................................... TCTTGTGCAAAAACAAGCAGAAGCGTCCTC 320711 36 100.0 30 .................................... GATAAACTTGACCAAGTAATTGGTCTTCTA 320777 36 100.0 30 .................................... GTGAATTTAAGATTGGCAGTCAGACACCAG 320843 36 100.0 30 .................................... AGTCTATGATGTGCCTTCTGATTTTGTTGG 320909 36 100.0 30 .................................... TCCGCTGAGAAAGCTTATTAAAGGTCAAGT 320975 36 100.0 29 .................................... GCTAGACGGGTTTAATAAGCACGGTTTAG 321040 36 100.0 31 .................................... CTAACAATTGATGACGACCCGATTTTAAAAA 321107 36 100.0 30 .................................... ATCGAGCAAGTCAATAGCATTTCCGCTAAT 321173 36 100.0 30 .................................... CAATTCGTCAAATTCTCCACCAAGAAGTGC 321239 36 100.0 30 .................................... ACTGCAGATCAACATTTGTAAACGGAATCT 321305 36 100.0 30 .................................... ATTCGCAGTGACTCTATGGAAATGGATACT 321371 36 100.0 30 .................................... AAGTGTTCTTTGCATAAAATCGGGCAGTTC 321437 36 100.0 30 .................................... AGAACTTCAAGCCAAAATCGAAGAGGTATT 321503 36 100.0 30 .................................... CAGCACGCGCCAAGAAAGTCAAAAATGACA 321569 36 100.0 30 .................................... ACCCTACAAATTCATTGGTTCAAAGCCTGA 321635 36 100.0 30 .................................... AAAGGACATGCTGATACTGTGGCACCTGTT 321701 36 100.0 30 .................................... CATTGAGTCAACTGGCGGGTTTTATCTTAA 321767 36 100.0 30 .................................... GATAAAGATGAATACAAAGACCCAAACACT 321833 36 100.0 30 .................................... GATAAAGATGAATACAAAGACCCAAACACT 321899 36 100.0 30 .................................... TATCTTTTGGCGGAATGAAATCTATTGTAT 321965 36 100.0 30 .................................... AATAGAATCAAATTCTCCTAAGTCAGTTAA 322031 35 75.0 0 ..........CA.......A.TG..-T.A.T..... | A [322047] ========== ====== ====== ====== ==================================== =============================== ================== 24 36 99.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAATCGCTAGAAAGATTGATTTCTAGCGATTTTTTAGGTATAATATCAGCAATCAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATGAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : CGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTATTGACGTCCAAAGGTTTGATACAAATCCTTAGCTTTTATCACATTATCCCAATGAATAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //