Array 1 3018-3771 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3018 30 93.3 36 ........A......G.............. GCTAAGACAACCTCATTGTTACATTCGTTACTACAA 3084 30 93.3 37 A..............G.............. TTAAGTTTGTAAAAAGCTTTATGAAGTTCTACAATAG 3151 30 100.0 36 .............................. TTTCTTGTATTGTCATAGAAATAACTTATATCAAAT 3217 30 93.3 36 A...............G............. GTTATAGGCTTGAAAGGGTCTGTAGAATCACCTTTT 3283 30 90.0 34 .C......A......G.............. ATATCTTCAACTATTTGTTGAAAAATATAATCTA 3347 30 96.7 34 ........A..................... GAACATATCCCGATTAAAGCATTAAAACCATCAC 3411 30 93.3 35 .G......A..................... TCTAATATTAATATATAACTATTTGCTTTTAATAA 3476 30 93.3 37 ........A...........A......... GTTATATATTTTAAGTATTGCTTAGTCTTGCTAATTA 3543 30 96.7 36 ...............G.............. GTTGTAGTAATACTATAATCTGTACTTATAGATACA 3609 30 96.7 36 ................G............. TAATATTTTTCTTTATTTAATACATTAATATTGAAT 3675 30 100.0 35 .............................. ATTGCTGTTACAGAATCTTTACCAACATTATCAGT 3740 30 96.7 0 .............................A | TA [3764] ========== ====== ====== ====== ============================== ===================================== ================== 12 30 95.3 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : TGGCTAATGCTATAGTTAAAGGATTAGTAAGGAAAACTACAAGCAATAGCACACCAAGCGAACCAACAAATAATAATAATAGTTGGATTAATTTAGATGGAAAAACAGGTACTATATGTACCCCAAGCGGTGTAAATATTAGAGAAAAGAAATCTACATCTTCTAAAATATTAGGGGCTTTACCTAATGGTGCCAAGGTTAATTTATATCGTAAAGAAGGAGATTGGATACATATTTATTATCCTCCGCATGGGGGTTATGTCTATGGGAAATATATAAGATATTAATTTTAAAGGTACTTCTATTATGGGAGTACCTTTTATTTTTCCAGCCTACTTTGATTTCAAAACCTATCTTAGTCATTGCTATGCAAGGGCTTAAAGTAGATTTTTTATATAGATTTCAAAATATTACAATCGGTTGAAAAATTTTTTAGAGAACCTTGTAAAATCAATGGTTCTATGTTATCCTTAAAATTAAAGAATGGCTATTTTGCTATG # Right flank : AATGGTAGTTGTAGCTTATGCCCTATAGCTATTCTTTTTTGCATTTAAAGGAATTTTTTAACATTTATAGAATATTAAATATAATGCTTCCTAATAGGTTAAATACAAACGTCCTTATTTAAATAAAAAGAACCCCAATAAAAGGGGTTCGTTTTGTGTGAATCTAATATAGGTCGGTGATGCGTCTTGGTTTATTTTTATTATATCCAGATGTAGAAAAGTTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTATAATAGGAGTATCTTCTTTTTTTTTATTGGAAAAATTGTTATAAATTATATAAAAAATTCATAAAAAGGTGTTGACTTCTTATACTACACGTAGTATAATTATAATTGTAGGGAGGTGAGATAAGTGGTTGAAACAATAAAGGACTTACTTGAAATTGTTGTATTAGTTCTAACAATCTGGACATTGGTCAATGAACTAAAAAACAATAACAAGAAGTCCTAAGCTAAAGG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 139807-140310 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================== ================== 139807 31 100.0 36 ............................... CAAATAGATCTGCTTTTATTCTTCCTGTATATCCTA 139874 31 100.0 33 ............................... TTTTAGGTATAAGTGACCCAATATTAGGCACGT 139938 31 100.0 35 ............................... TGCTATGCCGCAAGAGGTAGAGAAGGAAAAGCACC 140004 31 100.0 34 ............................... GGGAAAATAATCTCAGAGTTGCTTGTCCTGGTAG 140069 31 100.0 35 ............................... ACTATAACATTTAAAAGAGGAATAATTCTTAAAAT 140135 31 96.8 114 ..............................A GGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAAC 140280 31 87.1 0 A.......T......A..............A | ========== ====== ====== ====== =============================== ================================================================================================================== ================== 7 31 97.7 48 GTTGAACAATAACATGAGATGTATTTAAGCT # Left flank : GCATGACATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGTTCTGTGCCAGTTACTCCATCTCTAAATTCTACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATATGATTAGGTTAAGGAAGTTGTCATTTGGGTATCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAACCGACTCTAGTTCCAAAATCTATCTTAACCTTTGATATATAAGAGGTTAGGGGGTGCTTTTTATGTAAATTTCAAATTATTTAAAACGGTTGGAAAATTTTGTTTAGAACCTTGTAAAATCAATGGTTCTATGATATTCTTCAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGGGAAGGAGTTTCATTAAGTAATTATATACTTAGTATTTTAATACTAGATATAATACATAAGATTAAATATTAATATAGTATGTAATACATATAATGAAAATTATTAAAAGTCTTAGAAAAATCTAAGACTTTTATTTTATGCAAAATTTTAGAATTAAATATAACACTAGATTTAAAAATATTTAATGGAAGCAATAATATTTTCAAATTTAGTTTTTATAAAAATTAAGTAAAATAATTGGTTATATAACTAAAGAACTGTATGGTATAATATAGATAAAATTGTATAAAGAGGTGTATAAATGGAATTTTGGGAAGCAATTGTAACAGTCATGTTAAAAAAAGACATATATTTTGAAGATTGTGGATATATAATAGGGAAAAATATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAAGAAGTACATCCAAAGAAACAGTACA # Questionable array : NO Score: 4.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-1.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 3 153919-154428 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 153919 30 100.0 35 .............................. AAGGCAGTTATACAGGTTAATAGATTGGTTTTATC 153984 30 100.0 38 .............................. ATTTGTCCAAATAACAATATTTATCACCCCCTATTCGT 154052 30 96.7 36 ................A............. TTTCTATTTTCTTTAAAAAATTGCCTATCTACATTT 154118 30 93.3 37 ............T....A............ ATAGATAAACAACTCTGAAGATATGCTTTGCTTACCA 154185 30 73.3 118 .......CT......GAT..A.......GC AGAGAACCCAAATCTGTGATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGACACTTAGTATTTTAAGCTTAAGTATGATCTGAAAAG 154333 30 90.0 36 ........T......GA............. TATTTACATTCTGTTATACCACAACATTTACAACAT 154399 30 86.7 0 ........A.......A...........GC | ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 7 30 91.4 50 GTTGAACAGTAACATAGGATGTATTTAAAT # Left flank : AAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGCCTATTTTACTATGATTGAACAATAACATAGGATGTATTTAAATTAGTTTAGCAAACTACTGCCTTACCATTAGGCTTATGTTGAACAATAACATAGGATGTATTTAAATTCTTTATATAGATGCATATCTTCTAATACTCCACCTGTTGAACATTAACATGAGATGTATTTAAGCAGGGAATCCAAATTCCTGATTTGGTATGAGTCGCTTACTCCTTCGAAAAATAGAAGAAGTAGTTTTATTAATGAACATAGTGTATATATAATTAAATTTTTCCAAGTGAATTTAATCTTCAAACCTATCCTACCCATTGAAATATAAGGATTAGGATAGGTTTTTATTGTGTATTTATGAAAAAACAAAATCACTTGGAAAAATTTCTACAAAACCTTGTAAAATCAATGGATATATGATATTCTTGTAAATAAAGAATGGCTATTTTACTATG # Right flank : CAGAGAACTCAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGACTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTTCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGATTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTAAAATCAATGTGTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATTCTAAATCTTTTGCACTTGCTAATTTACCTTTTTCGTTGAACATTAACATGAAATGTATTTAAATTTAATATATTTACCAAGGTTTTATATTATCATACTTAAGTTGAACATTAACATGAGATGTATTTAAATACTACTGCAGTAACGGAATGTGGTGGCAAACCTAATGTTGAACATTAACATGAGAT # Questionable array : NO Score: 3.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:-1.39, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 4 154709-155003 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 154709 30 100.0 35 .............................. TCTAAATCTTTTGCACTTGCTAATTTACCTTTTTC 154774 30 96.7 38 .................A............ TTAATATATTTACCAAGGTTTTATATTATCATACTTAA 154842 30 100.0 36 .............................. ACTACTGCAGTAACGGAATGTGGTGGCAAACCTAAT 154908 30 100.0 36 .............................. AAGGGTTCTCCACACTCTAGTTCTTTCATAAGTTCA 154974 30 90.0 0 .......................C....GC | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 97.3 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TTAAGCAGAGAACCCAAATCTGTGATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGACACTTAGTATTTTAAGCTTAAGTATGATCTGAAAAGGTTGAACATTAACATGAGATGTATTTAAATTATTTACATTCTGTTATACCACAACATTTACAACATGTTGAACAATAACATAAGATGTATTTAAGCAGAGAACTCAACTTTACGATTTGGAGTAAGTTGTTTATTTCCTGTAGAGGAGAAGTATGAGACTCATTAATGAGCATAGTATATATATCATATCTAATTAAATTTTTTCAAGTGAATTTAAATTTAAAACCTATTCTAGCCATCGATATGTAAGGATTAGGGTAGATTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGGGAAAATTTCTTTAAAACCTTGTAAAATCAATGTGTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAAGAAATGCAATCATCTGATTTAGAATAATCATTTATACATGGCAATAATTTTTTGCTTTATTACTTCTTGAGTTAAATTGTGGGATTTTATTGACTAAAATATTTTTAAAATATAGTTTTAATTTTGGTTGTGCTTTAAAGTAGTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGGGTTTATATAAATTGTAAGATACTAATTATTTAAAAATTTATTTAATGAATCATTATCTTTAAATAAGTCTTTTAAGTTACCGTATTTTTGTCCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTCTCTACATTAAATTTAATAATTTCAGCATTTGGTATAAGAGACAATAATATCACTGCATTCTTTTCTAAGAGTTCTTCAACTTTTTTGTCCTTCCAAAATTTATTATAATTTTCTTCCCCTAAATTTTTATTTGTTTTATAGTTAACGGTTATTTCATAGGGCTCTT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 161639-162067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 161639 30 100.0 37 .............................. GGAATTTCATTTAATATTGCTATATTATTTATTATCC 161706 30 100.0 34 .............................. AAGTTATCTCTTCCAAAATATCCACCAGTATAAA 161770 30 93.3 35 A.......A..................... ACCATACTAATAGAGCTATAACAATTAATTTAATG 161835 30 96.7 38 ...............A.............. TATGCTCTTTTAGCTGCATAACCAGCTATTTGTGTTAA 161903 30 93.3 38 ...............AG............. TGCACTAGCTTTTATTTTTTCTATAGTTTCGGTTTTAC 161971 30 96.7 37 ........A..................... AAGGCTTTGTCAGTCAGCCCAGCGCTATTTTTCATAG 162038 30 86.7 0 A.................G.........GC | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 95.2 37 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : GTTTTTTGCAGTAAACATTTATGATACGATTGTTTTAGATATAGGTCTTTTTTGTCATAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCGTGGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTTATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTACTTCGAGAATGGGAGAAGTAGTTTCATTAATGAGTATAGTATATAGCTTATATATAATTGAAGTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGGATAGGTTTGCTTTATGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTTTCAAACCTTGTAAAATCAATGGTTCTATGCTATCCTTTAAATTAAGAAATGGTCATTTTACTATG # Right flank : CAGAGAACTCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGTAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTAT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 6 162605-162899 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCV010000003.1 Clostridium botulinum strain Cam3A-KM20-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 162605 30 100.0 37 .............................. TACAAGACTATATTGATAAGCATTAAGGTATAATTTA 162672 30 100.0 36 .............................. AGTTTATCTCATTTATTGATGCGGATTTGATGAAAT 162738 30 93.3 36 ........G......A.............. TGAACTTATAATATATAATGTAATTAAAGGTTAAGA 162804 30 96.7 36 ..................G........... CCAGTTAATTTATCTATAACCTTAAATACCATATAA 162870 30 90.0 0 ...............AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTCCTTAGAGGTAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATAATCTTAAAAATAAGGAATGGCTATTTTACTATGG # Right flank : CAAATTAAAATCCATGATTTTTTCCCTTTAAATTTATTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGCCATTTTAGACTTCCCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGACATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATAT # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //