Array 1 13017-15214 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFUM010000045.1 Clostridium chauvoei strain BS79-01 contig00045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 13017 30 100.0 35 .............................. AGATAACAACTGGAGAATAAAACCTATAGAAGAAG 13082 30 100.0 37 .............................. AAATTGTGTTCCGCCGGGTGCAAAATTCCCTTATATA 13149 30 100.0 37 .............................. CAGGAGTCGTTGTATTTGATGAAATACATGAATATGA 13216 30 100.0 36 .............................. AAAGGAGAAATATATAGAGTTGATAAAAAAATATTT 13282 30 100.0 36 .............................. ATTCTCCTAAAGATGATAAGAATGAATCTTTTAATG 13348 30 100.0 36 .............................. AGATAAGCTAGGTAGTGACCCTGCTGGAAAATTACA 13414 30 100.0 36 .............................. GCTGAATCTGGTGAGGACAATGTTGATATAACAATT 13480 30 100.0 36 .............................. TTTGTGCAATACTATAGATATAGCAAGTGCAAGTTC 13546 30 100.0 36 .............................. CATCTGACACTAATAAAATAGAACTAGAGATTTACA 13612 30 100.0 34 .............................. CCTTCTGATGATATAACATTTGCTATAAGTTGTG 13676 30 100.0 36 .............................. GTTAAAAATTTTCACCCACAAGGAACTTTTATACAA 13742 30 100.0 35 .............................. AGTGAAAAAGAAAAGGAAATTAGAAAGAAAATAAG 13807 30 100.0 35 .............................. AAGTCAGTTTATGTGTGGATTAATCCAAAAGCATT 13872 30 100.0 36 .............................. TGGACTTTCCTCCCAAGCTTATTATTTTTTAAAACA 13938 30 100.0 36 .............................. TTGTTAGCTTTCTGTATTTGCAAATCGCATATAATT 14004 30 100.0 35 .............................. AAATTTGGAGGGATAATTTAAATGGGTATATTAAA 14069 30 100.0 36 .............................. CTTTTAACATATCCCAATCCTTGATAACGAGAATAC 14135 30 100.0 35 .............................. GATGCTTTGAAGAAGTTAAATGATGAAGAGAAGTT 14200 30 100.0 36 .............................. TAGATTGAATGAGCATAAAAGCTTTTACTGTTTAAC 14266 30 100.0 35 .............................. GTACAAGTGCAAGAATAAAGAATAGTGGAAAGGAA 14331 30 100.0 36 .............................. TATATTATTTCAGCTAAATCTAACATTCCCGTATCA 14397 30 100.0 37 .............................. GTAAGTAGGAGGATAAAGAGAGCTATAAAACATTTAA 14464 30 100.0 35 .............................. ACAACTTACGAACTAGCTAACAAAATAAGCGGGGT 14529 30 100.0 36 .............................. TTAAAGTTTCGGTTAGCTACGTCCATATTTTCCCTG 14595 30 100.0 36 .............................. TTTGAAAGAGGTGTATTAATATGCCTATTTTTTTAT 14661 30 100.0 35 .............................. GAGCAAGAAGAATATAGTACATCAAAAAATAATGA 14726 30 100.0 36 .............................. TACTTAGGGTTTTCCTCATAACACCCGATATGGTAT 14792 30 100.0 35 .............................. ATTCTTTGCTTTTATCTCTATATTTAACTATCTCT 14857 30 100.0 36 .............................. CAGAAAGGCTAGGAATTCTAATAAAGAGTACGATGA 14923 30 100.0 36 .............................. ATTGTAAATCAAGTGAGACCTTTCCCAACACCGGCT 14989 30 100.0 34 .............................. AAAAGGAGCTGATGGGAATCAAGGACCAATTGGA 15053 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGGTAAAATGAA 15119 30 100.0 36 .............................. GGTAGAAAATAATGATGAAATAAAATATTGTTTTTA 15185 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 34 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAAACCTTTTTACCATTTAACTTAAAGGATGGGATGTAAATTGAAAAAACAAATTAATTATAATTACGTATTTATATTTTATGATATAAAGGAAGAACGTGTAAATAAAGTATTTAAAGTATGTAAAAAATATTTATCACATTTTCAAAAATCAGTATTCAGAGGAGGAATAACTCCTTCAAAATTAATTTTATTGAAAAAAGATTTAAATAAAGTTATAGAAAAAGAAGAAGATTTTATATGTATTATTAAACTTTTAAATGGGGATGTTTTTGGAGAGGAAATAATAGGAGTTCAAGGGCAAACAACAGGAGAAAGTTTAATAATATAAAATTACCAACCTAATAATATAGGTTAGAGCTTTAAAATACTACGGTATAAGTTATTTTTGTATTTAACTTTTATTTATAATAAAAAGCTGGTAATATATTTATATAAACATTATAAAATGGGCGTTGCATAGATATATAGTTATAAAAGAACTCTCATTTTTCTAAG # Right flank : ATCCGAGACAGTAGATAGTTTTGTGTAAAAACAAAACTATCTACTGTTTTTTGTATTAACAGTTGGAAGTTTTGGAATAATATACTATATAAATTAGGAGAAATTATTCTGACAAGAAAAATTGATACCAACTTTGATTACAATGAGGAAATTAAAAGATGCAAAACAATCGATGATGTAATGGGTAAAAACGGATTAATACAAAGATTAGTTAAAGATGTTCTTGAAAATATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 57548-56857 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFUM010000020.1 Clostridium chauvoei strain BS79-01 contig00020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 57547 30 100.0 36 .............................. TAATTGAAACTAGTATCACTGATTCTTTTTTTTCTT 57481 30 100.0 36 .............................. AAAGGATTTCTTGTTCCGTATTTTTTAGATAAATTA 57415 30 100.0 37 .............................. GGCACTTGGTAAAATATACCTTTTGCTTAAACTCTGC 57348 30 100.0 35 .............................. TAAAATACCACTCTTCTATTAATCTTTGGCTTGTA 57283 30 100.0 37 .............................. ATCTGCTTAGGATAGTCTTGTGTTTCTTCAAAGCTAG 57216 30 100.0 36 .............................. ATTGATGGAATGGTTAATTGATTATAAGAGATTGAA 57150 30 100.0 35 .............................. CTTATCCATCTGCCCATACCAGTTATACCATTCCA 57085 30 96.7 36 .......................G...... ACATATTTAACTTTCAAAAGCAACTGATTGCAATTC 57019 30 100.0 37 .............................. ATGGTAGGCAATATATTTGTTGGAACTTATACTAAAG 56952 30 100.0 36 .............................. GATTTATAGTTTTGACTATGATGATGAGTATATATA 56886 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CTACGCTAGCGGAGCTATCAATAATATTTGAAGATCAATTAAAAGATGAATTAGCTTAAAAGCTTGTACTTTTTATAAATTATATGCATACTATTAGATTTTTTTGAAATACTAAAAAAGGTAATAAAAAACATTATTAGTATTTCTTAAATATAAAAAAATATTACTGGAAATGAAAATTTCCAGTAATATTAAAATAATAAAAATGATAATTACACAGAATTATCTATTCTCTCAAATATCCTAACAATTAAGTATTATCTCTTATTCCCCT # Right flank : ACAAGGCAATTTGAGTACTTGAGTATACCCAATTTGATAGACACATAGAAAGTACGTATAATAATAATTAAGAAGGATGTGTTTATTAAATGGGAAACCAAAGAAGATTTACTAAAGAATATAAAGAAGAAATAATTAGGCTAGTAACAGAACAAGGTAAAAAGGTTTATGTTGGTGATATTACCTATATAAGTACTGAAGAAGGCTAGTTGTATTTAGCTACTGTAATTGACTTATTTGATAGACGTATTACAGGTTGGGCAATGGATTCTACTATGACTAGAAGACTAGTTATAGATGCCTTTAATACAGCTGTATTAAAGGATGTTGTTATGATAATGCTTGTGCAGAATTATTCTTCTTATCTTTAAAGAAGCACTTTCTTTATGGAAGAAAATTTAAAACGAGAGCGGAATCAAAACAAGCTATAGTTGAATATATTGAATTATTTTATAATGCAAAAAGATTACACTCTACCTTAGGGTATAAGTCACCAAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //