Array 1 87255-86434 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGBA01000058.1 Escherichia coli strain KS-P055 sequence058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 87254 29 100.0 32 ............................. CAACAAAACGCTGGAAGCCGGAACAGATATCT 87193 29 100.0 32 ............................. CTTATTGAGTTGGCACAGGAATTACATGAGGA 87132 29 96.6 32 ..A.......................... CCGCCGTCGAGTGTAATACCCTGATCCATCGC 87071 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 87010 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 86949 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 86888 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 86827 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 86766 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 86705 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 86645 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 86584 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 86523 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 86462 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAGATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 106704-105333 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGBA01000058.1 Escherichia coli strain KS-P055 sequence058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 106703 29 100.0 32 ............................. CCAGGGTGAGCCAGCGCCGCAGGAAGACACGC 106642 29 100.0 32 ............................. CGTTCCCAACGCTGAATATTGCTGGCATAGCC 106581 29 100.0 32 ............................. CCAATACGGAGAACCTTCATCGGTAATGGGGT 106520 29 100.0 32 ............................. GAGCGTAGAGATTCTCGAAACCGATCCGGACG 106459 29 100.0 32 ............................. GAAGTTGCGCGCACTAAGAAAAACAGGTTCGA 106398 29 100.0 32 ............................. CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 106337 29 100.0 32 ............................. TCATCGAAAACCAGCGGATCGAATGGGACGCC 106276 29 100.0 32 ............................. AGACGGCGCGTAAAACTCATACGGCGACAAAT 106215 29 100.0 32 ............................. CTCGCGGGCGTGGAATTTAACGAACGGTTACC 106154 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 106093 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 106032 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 105971 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 105910 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 105849 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 105788 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 105727 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 105666 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 105605 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 105544 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 105483 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 105422 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 105361 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //