Array 1 2956083-2953271 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080329.1 Weizmannia coagulans strain VHProbi C08 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2956082 32 100.0 34 ................................ CGCCGACAAATACAAATGAATTTCACTCGTCAAC 2956016 32 100.0 33 ................................ ATCAAGCGGAAAGCACGTTGGCAAATGGGCGGT 2955951 32 100.0 33 ................................ TGGAACAGTTAACGTCAGACAATTTACAGGGCT 2955886 32 100.0 34 ................................ CCAAACGATCAGGGATAAAGTATGGGATGAGTGG 2955820 32 100.0 36 ................................ ATCTAATTCAACTAATGAACCGTCATCGTATCTGCT 2955752 32 100.0 34 ................................ TTCCCGCTGCTGGTTGATCAGCTTTTTCTGTTCT 2955686 32 100.0 35 ................................ AGACGACAAATACGACTTACTTTGGTACAAGTTAT 2955619 32 100.0 35 ................................ TACATCTGGCACATACACGTTAAAGCTGGACGAGC 2955552 32 100.0 34 ................................ CGGGTCAAAATCCAAAAGGTTTAAAGCATCGCTA 2955486 32 100.0 36 ................................ TTCTAGCGTTATAACCGGGCGGTCTGGCATTTTGCC 2955418 32 100.0 33 ................................ CGCGCTATGCTACTGGAATAGGGACATTGCCAC 2955353 32 100.0 35 ................................ CTAAACCGTGACAAGCAAAATCCGAAACACGACAA 2955286 32 100.0 34 ................................ CCAAGCTCGATATAATAATCAGCAAAAGCCTGCT 2955220 32 100.0 34 ................................ GTAGACAATGCGTTGTAATTCCGAGTCAAAAAGT 2955154 32 100.0 34 ................................ GAACTTAACGACGGAATCGAACTCGACAGCGACG 2955088 32 100.0 33 ................................ GCACCATGCTCATCGGGCAAAGGAAAACATCCT 2955023 32 100.0 34 ................................ GTTGCAGAACAAGGCTTTGATGGCATCGATTATA 2954957 32 100.0 34 ................................ CCGTCATCAATTTTGCACCGGATTGTGCATCCTG 2954891 32 100.0 34 ................................ AGGCAGATCACCCGGATCTTTTGGACCGGGAAAT 2954825 32 100.0 33 ................................ AGTTAAAAATTGTCGGTTTTTGCCGTCCGTATC 2954760 32 100.0 34 ................................ TATGCGCAGCTGGCCTGTCTCTACCGCCTGCATT 2954694 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 2954627 32 100.0 36 ................................ GCCACTACCACCACATTCCGGGTCAATGAATGGGTC 2954559 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 2954494 32 100.0 34 ................................ GGGTCGCTACAGCTAAAAGTAAGTGTGCATTTCG 2954428 32 100.0 35 ................................ TTGGATATCGTATTTTGCGATGTATGCGGCCACCG 2954361 32 100.0 33 ................................ GCCTTTGCTTGCAGGTCCTGGACAATTTCCGGC 2954296 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 2954231 32 100.0 35 ................................ ACGTTGCAGCCAGTCGCCGATTGCGGTCCCCTGCG 2954164 32 100.0 35 ................................ ATCAAGCCACTCAGGCGGGTTCACATGCGCGGCAC 2954097 32 100.0 34 ................................ TTTCTTTGCCATTTTTTCATTCCTCCTTGTTGTT 2954031 32 100.0 36 ................................ GCCACTACCACCACATTCCGGGTCAATGAATGGGTC 2953963 32 100.0 33 ................................ TGATCAATGGTGCTCACTCTATAAAATCACTCG 2953898 32 100.0 36 ................................ GCCAGTACATCGGTCACGTCGGTTATGACGTCTATC 2953830 32 100.0 34 ................................ AAGACGCCTACCAGTTAATTGCGGTCGATACGGA 2953764 32 100.0 33 ................................ CTGTTTGAATGCACGGGACTGACTGAATACTGG 2953699 32 100.0 33 ................................ CGGTGCATCCTTGAGTGCTTCAATATGGTGCAC 2953634 32 100.0 34 ................................ TGCCGGAGGACCTGGATACAGCTATCCAGCATTA 2953568 32 100.0 34 ................................ TGCAATGGCAGGGAGCCTTAATCTTTCCCACTTT 2953502 32 100.0 34 ................................ CATTCCTCCATGCTCCACCCCGTCCACGCTTGTA 2953436 32 100.0 35 ................................ CTTTAAATACGCGGAAACATCCCCATAGTTTGCAG 2953369 32 100.0 35 ................................ CTCCTCCAATATGTATAGATCGTCAACCTTCACCC 2953302 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 43 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AGATGAGTATCCTCCTTTTCTGTGGAAGTAGGTGGAAAATTTTGCTTGTTGTCATTACTTATGATGTGAGTACTTTGACCGGAGCAGGGCAGAAGAGGTTAAGAAAAGTAGCGAAAGTTTGTCAAAACTATGGCCAGCGTGTCCAGAATTCCGTTTTTGAGTGTTTCGTTGATGCAACACAATTTGCCTCTTTGAAGATTGAACTGTCTAATATTATTGACCCAGATGAAGATAGCCTGAGATTTTATCAGTTGGGAAACAACTATAAAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAAGACCCCTTGATCTTTTAGTGCGAAGGTGTAGTGCACACGATTTTCCCGTGTGTTCGCACCAATATGCTAACCAATATTTTACATATATTGGTTAAATGTGGAAAAATAGTCCTTTGTTTATCAGAGGAAATGGCGAAATTTGGTTGTTTTAAAAACGTACATTCGCCTTTTTGACCAAATTCCGCT # Right flank : CGTTTGCTGTATTTGCGATCCCTAGGATCATCAAGTCGCTCCCTAATGAATACTTGCTGAGCAAACCAGACAAAGCCTTGTATCTGGTTCGCTCAGCCGCAAATCTGGTTGATGCCGCCTTCTTTGTTCCTTCCATCAACCTTAGACCCGAAAAGTGGCGCTGAACGCGCAGATACCAGTGACAAACCCTTTTTGTAAAGTAACTCTTGTTTTTATAGTTCCTGGAACCGGGACCAGGGCTTTCCTTATTCAGCAGCCCCCGATTATGTATTTCTGTCATCCTCGTCGTCCAGTTCCCTGATCAAATTCCAAGTCTGATAAATCCGGTTTGCCATTTTCTCAGGATCTTTCAGCATCATTTGGTATAAATCCGGCTCATGGCTCAACGTTTCAAGCAGTTTCTTTTCCGGATTACTGACCGCTTCATTTGTCTTCAGGCCGGCATGGTTGGTAAGGCCCAAAAGATAATCAATTGAAACTTTCAACACTTGCGAAATTCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //