Array 1 197073-194794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRK010000004.1 Robertmurraya massiliosenegalensis isolate MGYG-HGUT-01412, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 197072 32 100.0 34 ................................ AATCTCTCCTCAATGGATTACCAAGTGACACCAT 197006 32 100.0 33 ................................ AGCTATTGTTGCCGGAGCTGGGGATGCATCTGC 196941 32 100.0 36 ................................ TGTTGCATATCCGTTCGGCTTTCCACACTTCTTACA 196873 32 100.0 34 ................................ CTTACACATGGGATGGCTCTGACTGGGTTAAGGC 196807 32 100.0 33 ................................ AAGATTTCACGAACAAAGTTCCTATCTGAACCA 196742 32 100.0 33 ................................ ATATTTATGCTCACATATCTCACCCCCTTCCAT 196677 32 100.0 34 ................................ AGGAACTTGGACTTTTCCTGCTGTATTTATTGCA 196611 32 100.0 33 ................................ AACTCAGTTAAAGAGGCAATAGAGAAGTATTTA 196546 32 100.0 36 ................................ ATTAAATAAAATCAAGCGAATGAGCATATCGATATA 196478 32 100.0 34 ................................ AATCAAAATTCACTCCTACTGAGGATCGTGATTT 196412 32 100.0 34 ................................ AAAAGTCTGCGGGTAAACCGACTCTTGCTCCAGC 196346 32 100.0 34 ................................ CCGCATTCGCACAAGCACCTCCACACTACACGAC 196280 32 100.0 35 ................................ GGTGTATTTGTTGGAATGTTTATAAACGAAACGAT 196213 32 100.0 34 ................................ TAACGATGGGTCATGCTTTATAAATTCGCCAATT 196147 32 100.0 34 ................................ AAAGGTTGTTGTATTGGGGAACATTTATGAGCAT 196081 32 100.0 34 ................................ CATTAGTGCTAAATCCGTCATTTTCTTTTCCTCT 196015 32 100.0 33 ................................ TAACCACTTGGCGATTTCTGCCCAAAGAACATC 195950 32 100.0 34 ................................ ATTGCTTTAGTAATCAAAAGGTAGGATTTGTACA 195884 32 100.0 35 ................................ AGACTGACTCATCTGGAAAGATGATCGCTATCAAT 195817 32 100.0 35 ................................ TTTTGCAGTGAGATTTGACCAGTTTAAGTGAAAGT 195750 32 100.0 34 ................................ CTGATGTCACGTCTCCTAAAATAGCTGTTAAAGC 195684 32 100.0 34 ................................ GTCTGGTCAAATAGACCAGCTGCACTTAATCCAA 195618 32 100.0 35 ................................ CATCGATACAAATGAGTACAGCGAGAAGGCAAAGC 195551 32 100.0 34 ................................ TGTTTGCATACTTTCCATTATCTTCTGGAGGAAA 195485 32 100.0 33 ................................ TCGCTGGTGCTGGTGTTTTATATGGATTAGGAA 195420 32 100.0 36 ................................ AATAGAAAGGAAAGATTATATGAATAAAAATATGGA 195352 32 100.0 34 ................................ TGATGAGTGGGAAGATGTTATCAAGACAAGGGCT 195286 32 100.0 35 ................................ ACAGCAGAGGGATGCTGCGAGAATTAGGCTACATA 195219 32 100.0 35 ................................ CAGTTAAGATGGCTGACATGGATGTCCCACGCAAT 195152 32 100.0 33 ................................ ATAAAGGAATGGCTGAACATAATTTGGTTTGTA 195087 32 96.9 33 ....T........................... CATAATCATAGGTAACTGGTTAAGGAAACCTGT 195022 32 100.0 34 ................................ GGTCTAGCTGCCTTTTTTACTTTTTTAGGTTTTG 194956 32 100.0 34 ................................ AATAAATTGTTTGAAAGTGAATTACTTGATTTTA 194890 32 96.9 33 .....................A.......... TGACCATTTCACAACAAGATTCTGTTGATGCTC 194825 32 78.1 0 .......CT...T.AG...C........T... | ========== ====== ====== ====== ================================ ==================================== ================== 35 32 99.2 34 GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Left flank : TTGAGGAAAGTGTAAAGAAAGAGAGTTTTTGAAACAAGTCTCATTTTAGAAAAAGTAAACTTCCAGTTGCCAATCTTAATTCCAAATTGTCTGAGAAAATGTTAAGTTTTACTATAATAGGAGAAATGCTTCATACGTGTTTGCTGTTATTCAGGGAAATTAAACTGGTCTGTATGAAAAGTGTATGTATGTGCTAAATCCAAAGAAGACTAGTTCTTGTGCCAATTCTTATTCATAAAGAAAATTGAACTTAATTATGAAGTCGTACATTAATAATTAGTACTTTAAAGAAGATAGAAGTCTAATGTTATATAGAGCACTTACAATTTTAAGTGCGAATGTGAAGCTCACATGTTTTTCCTAGGAGATTCGCACCTAGTAAATGAGGACAATTCCATTAACTTTAATCTTTTTATTTAATAGTTTCTTGTACAACAAGAAAAATAGCGTTTTTATCTCTAAAAAAAGTGTAATTTTACTTATTTAGATTAAAAATCGCT # Right flank : TTGCACAAAGCGAACCATTCCGTTTGATCCGGGTGTCGCAACATAAAAAGGTTAGTAGATTAATAGTCGACAAATTTTCACATTAGAAACACATTTATTACTTTTTATGAAGAGTAGTAGCAGAATTCATTTTTATTCTTCGACGTTAATTAGGCAAGGGCGAATGTTCTGAAATTAGGATTTCGATATCTATTGGTGATGTAGTTGTATTATTCATATACATAAGGAATCTTCTTTTCAAGGATTAATTTGTTGTGCTGATTTAAGAGCACCAAAATGAGAGGTTTTATATGGTTTGCGCACATTTTGTTGATTGGAACGGAAGGTGGCGTGTCCTGCGGGAAAAGCGTGACCAGGTGAGATTTAAAGGGGCTTGCTCCAATCAGCTCACGGTCCGCCTACGGAAAGCTTCGCCTACAAAGTACATAGATAGTACAAAAACAGAGGTGCCATAAAAGCTAAGCTTTTTAAAGCACCATCAACTCCCTTGTTAATATCTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1107892-1095566 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKRK010000001.1 Robertmurraya massiliosenegalensis isolate MGYG-HGUT-01412, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1107891 32 100.0 35 ................................ TTGTGCATCTGCCCCTTTTGCTCGGACCGCTTCTC 1107824 32 100.0 33 ................................ TTCCATCGACCAACCTAAAGAGTTAGCACTAGG 1107759 32 100.0 35 ................................ GATTAGGATTGCTGGCTCATACGTCTGTGTTAGTA 1107692 32 100.0 35 ................................ AATCTCTCCTCAATGGATTACCAAGTGACACCATT 1107625 32 100.0 33 ................................ CGAAAGGTCCAAATCGAAGAAGGAGACAAAGCA 1107560 32 100.0 34 ................................ ATTTGCCCTGACCCTTACAAATACTCTAGCTCAA 1107494 32 100.0 35 ................................ GGCTACAACAACGGGTGTTAGCGCTGCAGCTACAG 1107427 32 100.0 34 ................................ AACGGTGGAATGTCATTTGGTAGAAAACTTACTA 1107361 32 100.0 34 ................................ GGTAAGGATCTACTTGGGATTATCCGGAAAATCC 1107295 32 100.0 36 ................................ TTTTTCACCGATAAAGTCATATCTTGATATTCAAAA 1107227 32 100.0 32 ................................ TCCTGCTTGTCGTGCTTTAATGGCATCTTCTA 1107163 32 100.0 33 ................................ CGTATCTTGCGTAAATGGTGCAAAGTGTAAATC 1107098 32 100.0 35 ................................ CCATGAAGTCTTTAATCCTTTTTTGCTGGAAGCAC 1107031 32 100.0 35 ................................ TGTTGGAATGTCCATATCAAGCAGAGGTCATTGAA 1106964 32 100.0 33 ................................ TTTATACGTTCTAGATTCTCTTCAACTTTTGAT 1106899 32 100.0 37 ................................ TTCAGGGCGAAGGTGACGACCAAACGATTTTTGACGC 1106830 32 100.0 33 ................................ GTCTATGGAGTTGTGTAAGACAAAATCATTTTC 1106765 32 100.0 36 ................................ ATTTTCATAAGTTCGTATGCGTATCGGTTGGATACT 1106697 32 100.0 34 ................................ TCTTAAGTCATTACCTCGGCACCATAACAGCAAC 1106631 32 100.0 36 ................................ CCCTTCACGGGTTATGAAAAATAAAGTCGGTAAGAT 1106563 32 100.0 33 ................................ TTGGGTTAGTAGCGGCATATGCGGCGTATTCCA 1106498 32 100.0 34 ................................ AATCGTCCTAATTCGACAGCAAGGGAGGAAATCC 1106432 32 100.0 35 ................................ TATTAAACAAATTGTAGAAGCTACAGGGATTTCTC 1106365 32 100.0 33 ................................ ACGAAGATCCGCATTATAGATCTAGTGAAGATC 1106300 32 100.0 33 ................................ CTCTATCCAACTACATTAAATATCGTTGCTTAT 1106235 32 100.0 36 ................................ AAGCTTTAGCTCTTTTTGTTTGAGTTGGTGCTTTTT 1106167 32 100.0 34 ................................ CTATCTGAACCAGAATAGTCCAAAAGATAAACAT 1106101 32 100.0 36 ................................ TGCTGGTGTGCCCTCAGGTAAAACTATCTCGTTATC 1106033 32 100.0 34 ................................ TATTTGGTCATAAATTAAGTCAGCTGCTGAACGT 1105967 32 100.0 35 ................................ TGCTTAGCCACATTACAAAAGCAACAATACCTAAT 1105900 32 100.0 34 ................................ AAATTTAAGCTGTCACGTTCGGTACGTTCATGAA 1105834 32 100.0 36 ................................ ACCGCAAGGTGAAACACGATCCAAAATAGGGGAAAC 1105766 32 100.0 34 ................................ AGTAAATATAGCTAAAACTTCAGTAACAGTAGTA 1105700 32 100.0 34 ................................ CTTGAATCCTGAGTATATTGTAGATGTTGATTAT 1105634 32 100.0 35 ................................ AATTGAGTAATAACTTGTAAAAGCAGATCAATATC 1105567 32 100.0 35 ................................ CTTTTAAATCCAATTCTTCAAAACACTTTGAAATA 1105500 32 100.0 35 ................................ AATTGAGTAATAACTTGTAAAAGCAGATCAATATC 1105433 32 100.0 33 ................................ TAGATGTCTATGTTTGTTCGAATGATCATGAAT 1105368 32 100.0 36 ................................ CATTGGATTCCTTAAAGACTGAACTTGCACAGATAG 1105300 32 100.0 34 ................................ AATTGAATCGTTCGATTCCAGCGAGACAAAGCAC 1105234 32 100.0 35 ................................ TCCTATCTCTACAGATATTAATTTGTTAGCTCAGA 1105167 32 100.0 33 ................................ TTTTCGCAAAAGCATTAGTATTTCGTTATTGAT 1105102 32 100.0 34 ................................ AATCAAAAGACGTAGCAGAAGCAATGAATGTCGC 1105036 32 100.0 34 ................................ AAGATACACGTTTAAGACCAGGGAGGGATTTCGA 1104970 32 100.0 35 ................................ TTAGTAAACAATGAACCAGTAACCGACAGCCTAAC 1104903 32 100.0 33 ................................ CATCTGCTTTTCTAACCAATCGAGCGACTACAT 1104838 32 100.0 33 ................................ TTGTGGGGTTGGATTGTCAGGGTCTGGTTCTTT 1104773 32 100.0 33 ................................ ATGCCACCGAGTTAGAATGAGAATAACAATTGC 1104708 32 100.0 36 ................................ AAGCAAGGCACGTTACTTTATCCTGCCAAACTTGCA 1104640 32 100.0 36 ................................ GACCACTTACGAATCAACGGTGTCGATGAAGCTATG 1104572 32 100.0 35 ................................ TCTTTCGTCCTCACGGTCTAGGTTGTGACGGCTAT 1104505 32 100.0 33 ................................ TTAACGAGCGAGATTTAAAAGACCTCATCGATT 1104440 32 100.0 33 ................................ TCTTTAATTTATTGACGTTGCTACCGTCTTATT 1104375 32 100.0 34 ................................ TCGGTGGGTATTTAGGATTTTCACTTTGTAAAAT 1104309 32 100.0 34 ................................ TTCTTTTATTTCTTTCTTTTTACGGACCAATGTA 1104243 32 100.0 35 ................................ TCTGAACATCGTGTCGATTCGAGTTGAGGAATTAC 1104176 32 100.0 33 ................................ AACAACTTTTAGCAAATGTGTATCGTAAAGAGC 1104111 32 100.0 33 ................................ GAAAGCGTGGAAAGAATTCAGGAACGCTTACAA 1104046 32 100.0 35 ................................ ATTACTGACTCATTAATGATCAATTCTTGCTTGAA 1103979 32 100.0 34 ................................ TGTGGACTAAACACCGTACGATTTTTCGAATCGA 1103913 32 100.0 34 ................................ TGACGGTATGCCGTTTGGTCCAGAGTGCCATGGT 1103847 32 100.0 35 ................................ AAAAATTTAGGGACAATTACGCTAACTACGATCAC 1103780 32 100.0 34 ................................ ATGAGTTAGGTCATCCATTCCAGCATGTAGGTTC 1103714 32 100.0 34 ................................ GTTACAGACTCTGCATTATCAACAAAGATCGGAG 1103648 32 100.0 34 ................................ ACGAGGGAAGAAAAGGTTATTTTACTTGAAGCTA 1103582 32 100.0 35 ................................ TTCGGTGAGGTAAAGTTCCTCTTCTAGTTTTTCGT 1103515 32 100.0 33 ................................ ACCATTCTGTTGTTTTCCCACTCTTGTCTAACC 1103450 32 100.0 35 ................................ TCACTTCCAAGACTTTGCACATATTCCGGTTGCGG 1103383 32 100.0 35 ................................ AGGAAAGTTGGGGCAAGGTCAGTATAAAGTCCATT 1103316 32 100.0 33 ................................ TATAGACGCAGTGAAACTTAAAGCGCAGAGGTT 1103251 32 100.0 35 ................................ AAACACATTAAACATGTTCCAGTAAACCTGATATA 1103184 32 100.0 35 ................................ TCCACATAATCGGCTCTTTATAAAGGGCGTCAATC 1103117 32 100.0 33 ................................ CTCCTGGATGCGAGTCTTTAACTGGTAAACCTT 1103052 32 100.0 35 ................................ ACCGAGTTGTTTCGATGTTAGTTTATTTCTTTTCC 1102985 32 100.0 35 ................................ ACCTAATAAATAATCTGTTGATACGTCAAAAAAAT 1102918 32 100.0 33 ................................ AGAACAAACCCAGTAAACTCTTGCCCCCTACTA 1102853 32 100.0 33 ................................ CTCGGCTAAAGCTCCAGCATGTTTCGCTAAAGC 1102788 32 100.0 34 ................................ GTCGAAGCCTTAACAACAAGCCTGCACGCATCAT 1102722 32 100.0 35 ................................ TCGACCCACCAAGCACTTTTTATCGATTTTCCTTT 1102655 32 100.0 37 ................................ TTTATTGGTGCAATTCGTCCAGTACAGCAAATTCAGC 1102586 32 100.0 33 ................................ TCCAGTAAAGCTTTCTGTCACCATGACCTCCAT 1102521 32 100.0 33 ................................ CTCCTGGATGCGAGTCTTTAACTGGTAAACCTT 1102456 32 100.0 35 ................................ ACCGAGTTGTTTCGATGTTAGTTTATTTCTTTTCC 1102389 32 100.0 35 ................................ ACCTAATAAATAATCTGTTGATACGTCAAAAAAAT 1102322 32 100.0 33 ................................ AGAACAAACCCAGTAAACTCTTGCCCCCTACTA 1102257 32 100.0 35 ................................ AGCAAGTTGATTCCTTACAGAATTAAATTCATTTA 1102190 32 100.0 35 ................................ TCTTCAATCATCCCTAGCTGCTACGAATAAATCAT 1102123 32 100.0 34 ................................ TAGCTGCAAGCGGTCAAACACTATATAAGCTTGT 1102057 32 100.0 35 ................................ CACCTACGACCCATTGCGTATAATCGTCAGTCCGT 1101990 32 100.0 35 ................................ ATCACTCATACCCTCTAATTCAGGTACGGCTTGCT 1101923 32 100.0 36 ................................ TCCATACCACCACATTTATGAAGTCTGCTTCACGTT 1101855 32 100.0 35 ................................ GGGAATATTATAATCATCGGCTGACGAATATCACC 1101788 32 100.0 35 ................................ CCCATGTAAGTATGACGAGCGATAATCTTATATAC 1101721 32 100.0 33 ................................ TCCAATCTTAATCACCACCTAAAATGCATTCTT 1101656 32 100.0 35 ................................ CTTATACAATTTATCAAGTTGTTCATCCGTTAAAC 1101589 32 100.0 34 ................................ CGGTATTGGAATGTCGGGAATAACCTCAAATCGT 1101523 32 100.0 35 ................................ TTAGCTCATTTACAAGAAGTGTTGCCAGAAGTATA 1101456 32 100.0 34 ................................ TCCTTTCGTATAAAAGAAATCTAAGAAGGGGCTA 1101390 32 100.0 33 ................................ AAATTTTGATAAAATAAATTCTTATCCTTTATT 1101325 32 100.0 37 ................................ TCCCATTTACTCAACCTCCCAATACAAAAATAAAGAG 1101256 32 100.0 34 ................................ GCTTACTAATGAGCGTGAACGAGCCTATATTTTT 1101190 32 100.0 33 ................................ ACTTACTCTTGTGTTTACTTCTGAATAATATCC 1101125 32 100.0 36 ................................ TTCTTTAAGTCTGTCTATTTCGTCAAAGGGAATAAG 1101057 32 100.0 33 ................................ AGGCACAACAATACCACTAGCAAAATGAAAAGT 1100992 32 100.0 33 ................................ AAACATTCCACCTTTATGACTACCTGAGTTGTA 1100927 32 100.0 33 ................................ TTGTCTAATAACACTTTTATCAACAATACCACC 1100862 32 100.0 33 ................................ TTTGCCCAAATCATATAATTTAACAGCAAACAT 1100797 32 100.0 33 ................................ AGCATTCCTCCAAAATTGTTCTTGCAAGTCTTT 1100732 32 100.0 34 ................................ AATAATTACCTTTATAGCGTTTTTATCAAACTCG 1100666 32 100.0 35 ................................ ACTAAATCCCGTTGGAATGTATTGAGCAGGTGTTT 1100599 32 100.0 35 ................................ TGAATCTGGTTTGTAAGCAACTTCATGTATCCAGC 1100532 32 100.0 35 ................................ ATATAATCACCTCATATCAATTGTACATTATATAG 1100465 32 100.0 35 ................................ TTTTAGTTATGTAAAACTCATAAATTGCCACTAGT 1100398 32 100.0 36 ................................ TATTATTGTTTCTACTGATGATGTCCCCTTAGTACC 1100330 32 100.0 36 ................................ CAATCTAGACTTAGACCCACTAACATCCGCCACCGC 1100262 32 100.0 36 ................................ TTTGCGTCAGATTCTATATTTAATGCTTTAAACAAA 1100194 32 100.0 33 ................................ TGTTATGGCACCTGCATCTAATAGGTCTTTATA 1100129 32 100.0 32 ................................ ACTTTGTACCCAAGTTCAGGTAATTCCTTTAA 1100065 32 100.0 36 ................................ ATTTATTCGGGCCAACTGACTTCGAGTGATCAGCTG 1099997 32 100.0 37 ................................ CAGAGTTAGATGAAGCAGATAAACGGAAGAATGCAGT 1099928 32 100.0 35 ................................ TTGATTGAAGGATGGGCTAGAGACGGTCTTACGGA 1099861 32 100.0 35 ................................ TAGCGAATCTCTTACTGGAACAGCAGAAACGAAGA 1099794 32 100.0 33 ................................ AAACATACTCTCACCCTTTCAATCTTCTACGGA 1099729 32 100.0 34 ................................ AGCAAAATAAAAAGAGGTCCGGCAGATACTCCGA 1099663 32 100.0 37 ................................ ACTTAAGGACTTATTAGCTGAAGCTGAAGTTAAGAAC 1099594 32 100.0 36 ................................ GATATTGCCTATAACTAATACTCTTGATGGCTGCTT 1099526 32 100.0 33 ................................ TTCTATTCAACAAATCCTACCTTGTGTTTACTT 1099461 32 100.0 36 ................................ TCCAAATGCATCTCTTACATTTCTCCATGTCTTTTG 1099393 32 100.0 34 ................................ CTCTAATACAGTTAACAAACCGTATTTATGACCG 1099327 32 100.0 36 ................................ TTTTCTGCGGTATCCGTATGTAAAACGCCATATAAC 1099259 32 100.0 34 ................................ AAACTGCACTTTCCAAATCGGTACTAAGTTGTCT 1099193 32 100.0 33 ................................ AAATGGATTGTTGTTATGTAATGACTGTCACAA 1099128 32 100.0 34 ................................ CAACTCGATACTGAATATAATCTTCTGTATCGTT 1099062 32 100.0 33 ................................ GGAAAATTATTTAGTGTTATATGGTCCGTTATC 1098997 32 100.0 34 ................................ CGTTTTCGTATGCAGTGTATGTAACACGAGCAAC 1098931 32 100.0 36 ................................ TTCCATGATGGTATCGAATAATCCTTGAGCATAACC 1098863 32 100.0 34 ................................ TCTTACAGCAGTTCGTTTGAAAAAGAAAAAAGAG 1098797 32 100.0 34 ................................ AATAACACCGAGCTTATAATTAGCTTCGATCAAC 1098731 32 100.0 33 ................................ TACAATCGATTTTTGTAATAATGAAAGAACCTC 1098666 32 100.0 34 ................................ TACCACGAGTAGGGTAGAGCGACAAGAACTTTTG 1098600 32 100.0 36 ................................ ATCTACTTTCCACCTCGTTTACAGAAGGCATGTTTT 1098532 32 100.0 34 ................................ AAGAAGATAAAGATGGGTATTTCAGAGTCAATCT 1098466 32 100.0 36 ................................ GTCCTCAATCCTCATGCAAAATTCACGGTTTACGAT 1098398 32 100.0 34 ................................ AGTTTACTCACCCTCGTTCCCTCCTTCCTTTTCT 1098332 32 100.0 33 ................................ ACATCAAAACTATGTATACTATTATCCATTAAT 1098267 32 100.0 36 ................................ GTCTAATGTAATAAGGAGAATGTGAGTGATGTAAAC 1098199 32 100.0 34 ................................ TTACCGAGTGAGAGGGGATTACAAGAAGTATTCG 1098133 32 100.0 35 ................................ GATTATAAGGATGAGAGGAAACAAGTGTATGAAGT 1098066 32 100.0 36 ................................ AAATTACGTTCATAGGTACGGTTAAACCTATTAAGG 1097998 32 100.0 36 ................................ ATCAATACTGGATTCAATCTTATCAGGGTTCCCAAA 1097930 32 100.0 34 ................................ CAGACCACGCAAGCACCTGAAGCTCTTGCAGCTT 1097864 32 100.0 33 ................................ AGTAAAATAATCATCAGGATTAATGGATAAATC 1097799 32 100.0 36 ................................ GCTCTCGATGGCTCTGAGTGTTCCATCCTCAAGCAC 1097731 32 100.0 36 ................................ GCTCTCGATGGCTCTGAGTGTTCCATCCTCAAGCAC 1097663 32 100.0 32 ................................ GCAAAGGTCTTTTTGATTAGTGCCACCACAAG 1097599 32 100.0 35 ................................ TTTAGGACGTCTGGCAAAACCGACAGCCAAAATGC 1097532 32 100.0 35 ................................ TTAGCTGTATACGAAATCACTTGAGACACTCCTAT 1097465 32 100.0 33 ................................ TAAATCCGCAAAATCAAAATCAAACTTTTTATC 1097400 32 100.0 37 ................................ GGTCGTGGTTAGATTCGCAAGAAGATGGGGCTATGCT 1097331 32 100.0 36 ................................ CATCTGCTCCCTTGCGAGATAATAGCCCCCAATAAT 1097263 32 100.0 34 ................................ ACTTCAAAACTATTTAACAAAATGTATTGAGGAT 1097197 32 100.0 36 ................................ TTGGAAGGTTTGATATTGATGTGTATACCGAGTTGG 1097129 32 100.0 34 ................................ TAAAGATGAGTACTATGTACTTTGAGGATGCAAC 1097063 32 100.0 33 ................................ TTTCAACTGCAACAATATCAGATAGCGAATACT 1096998 32 100.0 36 ................................ ACCAATTCCAGCAAATTCATCGATGATTGTATCATC 1096930 32 100.0 36 ................................ TAGGCTCCTGGTCCTTACTCCAAAACTTAAACCCGT 1096862 32 100.0 35 ................................ ACCACCACTTACTTTCTTATCTAAGGCCATCTTGA 1096795 32 100.0 36 ................................ AGTAACTTCAATCGGATCACCTTTAAGTAGTTTTAA 1096727 32 100.0 34 ................................ GCCATCCATCCGCTCGACTCGCAACTGATTGCGA 1096661 32 100.0 33 ................................ ACGCGCTTTCCTTCGCGAATGTTATTACTTCCG 1096596 32 100.0 35 ................................ GCTATATTCCATTTCGGTCAGCTCTCGGTCTACGA 1096529 32 100.0 37 ................................ TAAATTCACAGAAAGCTATTTTGTGGAATTGCTATCT 1096460 32 100.0 36 ................................ TATTGCTTTCGATAATACATGGAATAACCCATTAGG 1096392 32 100.0 35 ................................ TCTTTTAATTCCAAAAGGGTATTATGTTCGTCTAC 1096325 32 100.0 34 ................................ GGACTTGTTGTTACATCCGTCTACGATAAAAGCG 1096259 32 100.0 33 ................................ GATTGCTAGATTCGAAGTGTATACGGTCGGCAG 1096194 32 96.9 33 ...................A............ GTATATTTTATGAAGCACGCGCCACATTTTCGC 1096129 32 100.0 36 ................................ ATTGTCGTGGACCCGGCGTACATTAGCGATCATCGT 1096061 32 100.0 33 ................................ TCTGTCAAATGCTCGTAATTGCCCTTCTGGACC 1095996 32 100.0 36 ................................ CAGTACCGTTCCCGAATACTTGTTGAGCGAATAGAT 1095928 32 100.0 34 ................................ CGTTTGTACTTTGCTAAATCCAATACGGTCACGG 1095862 32 100.0 33 ................................ CGCAAAGTGGAGCATGTTCAATGCGTATATAGT 1095797 32 100.0 35 ................................ TGATGTATTCCCTTTTGAAAGGAGACTCATCTATC 1095730 32 100.0 33 ................................ TATCAGCCATTAAATTCAAAACAAGATTTTCAC 1095665 32 100.0 36 ................................ GCTTTTAGCACTAACAGTTTCCGCATAATCCTTGTC 1095597 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 186 32 100.0 34 GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Left flank : TGGATGAATATCCGCCATTTTTCTGGAAGTAGGTGATCATTTGCTTGTATTAATAACGTATGATGTTAGTACAGTTAGTGTTGGGGGACAGAGAAGGCTACGAAAAGTTTCAAAGGTATGTCAAAACTATGGTCAACGAGTTCAAAATTCAGTATTTGAATGTGTTTTGGATTCAACACAATTCGAGTCTTTGAAATTTGAGTTGATGGGTATTATTGATGAGAGTACGGATAGCCTTCGATTCTATCGATTAGGGAATAACTATAAAACCAAGGTTCAACATATTGGAATTAAGGAATCACTAGATATAGAGGGTACCATGATTCTATAAGTGCGAATGTGAAGTGTACATGAAATACTAGGAGGATTCGCACTTAATTTCGTTTAGAACTTTTTGTTTATTTAGAATCATTATAAATATTGTCCTTTCATTTAATAAAGGAAATAGTGGTTTTTTTAATAAAAATCTATATATAGTGTTAGTTTGTTAAAAAATCGCT # Right flank : CGCAGAACGCATAATCGCACCACCTGGACCCAACGGATCTAACAAAAGAAATGTTGGAAAATACAGCGAATCATCTAAGAACACAATATCCAAATATATTCTATGTACTGGCAGATGCGGAGTCACTTCCTTTTATGGATGAATCATTTGATATAGTGACGTGTCGGATTGCCCCACATCATTTTCCGAATCCAGATGATTTTATCCGTGAGGTAAGTAGAATGCTTAAGCCAGACGGAAAGTTTATTCTAATAGATAATATTGCCCCAGAGGATACGAAAAAGGGTGCATTTATGAATGAAGTAGAGAAATCAAGAGATGTTAGTCATGTCCGTTGTCTATCTATGTCAGAGTGGCAAAAACTTTTACAAAGCAATGCTCTAGAAGAAGTTCAATCCCGAGAAAGAAAAAAGAAATTTATATTTCCAGAATGGGTTAAGGTGACTACTAAAAGCCAGGAGCAAAGGGATGAGGTAGAAAAACTATTGTTAAATGCATCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //