Array 1 11169-11000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCZW010000009.1 Streptococcus lutetiensis strain P432802 KS_38_NODE_9_length_63236_cov_608.857_ID_643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 11168 36 100.0 31 .................................... CTTTGGTCTATGGCGAATGAAAAGGCTTCGC 11101 36 100.0 30 .................................... AAATATACGCTATAATATACTTGTAAGATA 11035 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 3 36 100.0 31 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCGCCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTGGTTTGGGGAATAAAATAATTAAGTATGGAATTATTCGGAGCTGAAGTCAGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAAATGGTCCACGAGG # Right flank : TGTGGCTACTAAATATGAATACACCAAAACCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGTAATGAGTTGAGTTTTTATTACCTTTGGTTAAATAATAGCGCTTTCTGCAAAATTTGTAAAATGATTTGTGGTAGCTGGTTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 12870-11772 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCZW010000009.1 Streptococcus lutetiensis strain P432802 KS_38_NODE_9_length_63236_cov_608.857_ID_643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 12869 36 100.0 30 .................................... AATTCACAGAAGTGTCATTCACGTACTTAA 12803 36 100.0 30 .................................... AATGCGATTGGTTCTTATTTTGCTGTTAAT 12737 36 100.0 30 .................................... AGGCTGAAGGAAGAGAGAGCGAAGTAAATG 12671 36 100.0 30 .................................... ATTCGCATCAGCATCTTTCGCATCATCAAT 12605 36 100.0 30 .................................... TTATAACGGGTGTGAGGGGATATAAACATT 12539 36 100.0 30 .................................... ATATAAGAGATGGATATATCAGCGCAAAAG 12473 36 100.0 30 .................................... TTTTTTGGTATAATAGATGCATAAGTAGTT 12407 36 100.0 30 .................................... TTGAGTAGCCTTCTTCAGCTTGGTGTAGTG 12341 36 100.0 30 .................................... CGCAGACTGTACAATCTGTGGCAAGTTCTG 12275 36 100.0 30 .................................... GCTCTCTAATGTCTGTAATTTTGTAATGCT 12209 36 100.0 30 .................................... ATTTTCTATTTTTTATGCGTGTTTCAAGTA 12143 36 100.0 31 .................................... CATTTTTCTTGAAGCTTTGGGAGGTTGAAGG 12076 36 100.0 30 .................................... TTGAAAATCGTATTAATTGTGTTTAGAAAG 12010 36 100.0 29 .................................... TCCGCAAATTGGTGCGACGCGCCACAATA 11945 36 100.0 30 .................................... TTTCATACATGCAAAATTTGCATTGATTGT 11879 36 100.0 30 .................................... TATACCACGACTTGTTTGTTTTGAAATCAC 11813 36 88.9 0 ....................T...AAA......... | T,AAT,C,A [11777,11779,11784,11786] ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.3 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TTTCACAAAGAAGAAGGTGGAAGTTTTTGGGTAGAATTTCCAGGATTCGGTGGTGAAACTGAGGGTAAAGATATCGAGGAAGCTATGAAGAATGCACGTGAAATGCTTGAGAGTTCGTTAGCTGCGTATTTAGATGAAGGACTTGCTCTTCCAAAAGTTATTGATATGAGTGAGTTAACCGTTGATGATGGCTTCATTACTCTGATTCAAGCTGATCCTTCACTGTATTTAAAAAAGACAAAAGCTATTCGTAAAAATGTTACGGTAGCAGAATGGTTAGTCAGATTAGCTGACTGTGAGCAGGTAAACTATTCTGAGGTTTTAACAAAAGATTTGGAGAAAAAAGTTGCAACTATAAGTTTTAAGATTGTTCAGGAACGTTGAAAAATCAAGGTTTTTAAGGTATAATAAAACTAACATTATGGAGCTGTTCGAGACTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAGATTTCGTGAGAAAAATTGGTCCACGAG # Right flank : TGTAGTAAAAATTACTTTCAATGTTTTTCAAAAGTTTTCTTTTATGGTAAAATTGAAAGTGAATTTATTTTAGTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGCGTGAAACGCGGACTTGTTAGTGAAGTACTTAAACGTATTGAACGTCGTGGTTTCAAAATTGAAAAATTAGAAATGCGTATGGCAACTCCTGAGTTGTTAGAAAAACACTATGAAGACTTGGTTGATCGTCCATTCTTCCCACTAATCGTTGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATGTCAGGAGAAGAAGTAATTACTTCTTGGCGTACAATGATGGGTGCAACAAACCCTAAAGAAGCTCTTCCAGGAACAATCCGTGGTGATTTTGCTCAAGCGCCAGCTGAAGGTGCTGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCAGTAGAACGCGAAATTGCCCTTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //