Array 1 9516-8703 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZMS01000013.1 Moraxella lacunata strain CCUG 57757A contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9515 28 100.0 33 ............................ CGAACGGGTGCTGACCAAGCTCACCCAAACGCT 9454 28 100.0 33 ............................ TACGCTATTCAAAAACCCCCAAAACTCACTCAA 9393 28 100.0 33 ............................ TAGATGCAGAGATTGGTGCATTACTAGGCTAAC 9332 28 100.0 33 ............................ GATTGGTATTTTAATGCCCAAAAAGCCCCTGCA 9271 28 100.0 33 ............................ GCTAATCTCAATCGCTCTTTTGACAACTTTGAC 9210 28 100.0 32 ............................ AATCATACCCCTGCTAACCCTTGCTATATAAG 9150 28 96.4 32 C........................... CGATGACCTAGCAGATTATTTGCGAGATGATA 9090 28 100.0 32 ............................ TTTGTACTGATGTTTACCGTAGCCTTTATGCT 9030 28 100.0 32 ............................ TTACTGATAGCAAATTGGTGTTTGGTAGTACC 8970 28 100.0 33 ............................ AGTATCAAGAATTGGATAGGGGCAAGGCAAGGG 8909 28 100.0 32 ............................ TTGTAAACTCTTAAATGAGAACAACACCCATT 8849 28 100.0 32 ............................ GTAAAATCCAACTCAAAACACAGTGCCATCAA 8789 28 100.0 32 ............................ AACGGATATTGTGCGTTTTAATCGCATAGAGG 8729 27 89.3 0 ..........A..C..........-... | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 33 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : CGATAGCGGACGTGGGCGAGCGTGCGACAGGCTATGTGGTGGTAGAACGCCAACAGCGAGCGGGTTTGCAAAAACAAGCCGAGCGATTTGCCGAGTTTAAAAATCTGACGGTGGAGCAGGCGTTGGAGCATTGTTTGGCGTACAAAAAACAGCCAAAGGCGTATCCGTTTATTGAGCTATTCAGCCAAACTAATCAAGTGCCGTATCGGCTGTATGTCAAACAAACAGTCGTGGATAAGGCGGTGGACGGCGAGTTTACGGTCTATGGTATGCACAATCAAGGCGGAGCGATGACGGATAAGGCAACTGTTCCACATTGGTGATTGAGTTTGGTTGTGCTAAAATAAGGGGTATGATACAGGTTTATGCCCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAACTACTTATAACAAGGCTAAAAAACATTGGGTAAATGCCCAAAATATGGCTTTAAGTCTTGATATAAGTGGGTTTTATGTTGTATAATTCTA # Right flank : TTGTATTGAACCGTATCGCAATACAACTCAATACAATCCACGCCGCACAGATAGCTTACAAAGCAAAAAAATGCTATAATAACCCACATTTTTCAAAGAATTAGGCGTATGCCAAAGGATTTTTATGAGCGAGCAACTTCCTACCAACGACTACAATGCCAGTAGCGTGCGAGTTTTGCGTGGACTAGAAGCGGTACGAGTCCGCCCTGGTATGTACATTGGCGACACCGATGACGGTTCGGGCTTGCACCACATGGTGTTTGAGGTGGTGGATAACGCCATTGACGAGGCACTCGCTGGGCATTGCGATGAAGTGCTGGTTACCATTCATGCCGATGAGTCGGTGTCGGTGTCGGACAACGGACGAGGCATTCCTGTGGATATTCACCCCGAGGAGGGCGTGTCGGCAGCCGAGGTTATCATGACGGTCTTGCACGCAGGGGGCAAGTTTGACGACAACAACTACAAAGTCTCAGGCGGTCTGCATGGCGTGGGCGTGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 9889-9341 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZMS01000091.1 Moraxella lacunata strain CCUG 57757A contig_67, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 9888 37 100.0 27 ..................................... TTTGGCAAGCCCCCATTATTATGTAGA 9824 37 100.0 25 ..................................... AGTACTTTTAAGGTCTTAGGCGACT 9762 37 100.0 27 ..................................... CCTGTAAAATCAATGGAGAAAACCCAT 9698 37 100.0 27 ..................................... TGGCAAAATCAATAACCCTAGCTTTTA 9634 37 100.0 28 ..................................... GATATGACAGGAGAAAGATATGAGTCAA 9569 37 97.3 29 ....................................G CAATAATGTTTATGCGTGTGAAGTGATTG 9503 37 100.0 26 ..................................... CTATCATTATAGTCGTGGTTTTTGAA 9440 37 97.3 26 ....................................C AGCAGTGGTTAGAGAAATGGCAGGAC 9377 37 89.2 0 .................................TTGG | ========== ====== ====== ====== ===================================== ============================= ================== 9 37 98.2 27 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATA # Left flank : TGGTTTTGATGTTGCCAAATTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGACATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGACAGGTTGCAATATTCGGTCTATGAAATTCAAAACAGCGAACGCATTTTAAACATCATCACCGAAAAAATAAAAGCAGAATTTGAGTCTTTATTTACAGGAGCGGATAGCGTCATTATCTTTCGGTTTACAGAACGTGAAGTATTAAGATTTGGTCATGCCAAACATCGTAATGAGGATTTGTTAATTTTATAAAAATCCTTGGCAAAAATGATGAGGTTTGTTATAATAAGAGATCTAAATCACACCCAAATGTTTACTTTACAAACCTAAGTCTTAATGTGTGATTTATCATGTTTTGGCGGTAAAAATGATGATTTTTTGTACAAAAAACTTGCTAATTTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : CGTTTAAGATGATTAACCCCACTGCCTGTCCCGAAACGCTACTGCCGTGTCTTTGGCTTTTTTGATGGCAAGTTTGCGGTTATGACTGGCGAAGAGCTTTAACTGCCACAGTTTTTCTTGGTATAAGGTCAGATGGTCGCTTGGGTGCATGCGATTGATAAGGCGTTTGCTCGCCAGTACCGCATCAGGTGAGCGAGTGGCAATCTCATCGGCTAGGGCTTTGGCACGTGTCATCGGTTCATCATCGAGATGGGTGATGAGTCCGTAGTCGTAAGCGGTCTGGGCATCAAGTAGGCGAGCGGACATGGCAAGCTCTTTTAGCTTATCCTTGCCGATGTCTTTGGCAAGACGGGTCAATCCCATGTCAGCGACCAATCCCCATTTGGCTTCAAGTACTGACCATGTCGCTGATGGGTGGCTGATACGTACATCCGCCCCCATGGCAAGCTGTAACCCCGCCCCAAGGCATACGCCATCGACCACGGCAATCACTGGTACAG # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //