Array 1 18923-15109 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAACBW010000042.1 Corynebacterium macginleyi strain 14T168 HBRU114_42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18922 29 100.0 32 ............................. CAGAACCAGCAAACGGGTCGATGATGGTTCCA 18861 29 96.6 32 ............................G ATGCGAGATTGCACTCCTCATAGAAGCGTACA 18800 29 100.0 32 ............................. ACCAGGGATTCTGTGAGCTAATCCATGAAGGA 18739 29 100.0 32 ............................. CGGGCCCTGAGGGTAAGCCGGGCAAGCAGGGG 18678 29 100.0 32 ............................. CCCTGGATTGCCTCGTTAAAATCGTCTTGTTG 18617 29 100.0 32 ............................. TCCCACTTGGAGCGCTCCCACAGGTGCTTCCA 18556 29 100.0 32 ............................. TCGAGCTTCGGCATGGTCTCAGCGCTGGTCTA 18495 29 100.0 32 ............................. AGTGGGTGATAACCAATGACTTTGCCAATGAA 18434 29 100.0 32 ............................. CACGACGAGCCGGTTACCGGAACGTTGTCGCC 18373 29 100.0 32 ............................. CGTTCCAGACTGACACCCATGCAACGTTGCAG 18312 29 100.0 32 ............................. CGCAGCACAATGGTTCACCTGGCTCGAGGAAG 18251 29 100.0 32 ............................. GCACAGCTTAAACCGGACACGAAGCAAAAAAT 18190 29 100.0 32 ............................. ACGCCCGCGAAACATCGTAACCGGGCCGACTG 18129 29 100.0 32 ............................. TCACGTTTACATGCGCGTATGTCGTCCACGTG 18068 29 96.6 33 ............................A CTTGCCCGCCTACAGCGCTATTTGCTTGCCGCC 18006 29 96.6 32 ............................G CGTTTATGCGCTCGGTCGAGGGGGTCGACGGC 17945 29 100.0 32 ............................. GCGCACGATGCCGAGGAATGTGGTGTGACTAC 17884 29 96.6 33 ............................A CCACGGGATTGTATCGAAGTAGTCATATGAATA 17822 29 100.0 32 ............................. AACCACCGAGTCGTACCGCTCGGTCAAGCATA 17761 29 100.0 32 ............................. CACCGCCGCGACGGTGAGGATGGTGTTGGCGG 17700 29 96.6 32 ............................G CGCTGGCTCGAAGAAGGCTTCTGCACAGGCCG 17639 29 96.6 32 ............................G CGTTTATGCGCTCGGTCGAGGGGGTCGACGGC 17578 29 100.0 32 ............................. AGGATGTGATGGAACATTTCATCTAGTGCTTC 17517 29 100.0 32 ............................. CGTGTGTACTTTGACAGGCAGTTCGGGCACTG 17456 29 100.0 32 ............................. GCCACAATGACAGAAACTAATCCCGGCAATAG 17395 29 100.0 32 ............................. GGGATTAGGGAATGCGCGGAGTGTAGAGCCAA 17334 29 96.6 32 ............................G CCGGGTGCAGAAGAATCGTGTTCGGCTCATAG 17273 29 100.0 32 ............................. CGACCGTTCTTCGACCGCTCCTGAGCCACACC 17212 29 100.0 32 ............................. TGCCCGCCTGGATGCAAGCAGTCAAGCTACAG 17151 29 100.0 32 ............................. GCGCTTCCCGTCCACACGTACAGGTCGCCATC 17090 29 96.6 32 ............................G ACCGAGACCGAGCTATCAGGGATGCTCTAGCG 17029 29 100.0 32 ............................. TTATCGGAGCTCGCGAAGCGGCGGGCATTCTT 16968 29 93.1 32 .....................G......G TAGTCATACGTCTCATTATTGCCCTAACCTGG 16907 29 96.6 32 ............................G TTTTCCAATCAGGTTGGCTACTGCTCCAATGA 16846 29 100.0 32 ............................. GCTCTGGTGGGCATGAGTCCGCAGGACCGTGG 16785 29 96.6 32 ............................G CACGGTCCAAGTCCTGCAGCTTCGACGACGAC 16724 29 100.0 32 ............................. CACGGCGTCGCACCGTGGAAAGTCGGCGCCCT 16663 29 96.6 32 ............................G CTACCGCAAGGCCCAGTAGGCCCCGCAGGACC 16602 29 96.6 32 ............................G GTGCACCGTCACCGGTCAAGTAAACGGGGTTA 16541 29 100.0 32 ............................. GAGCCAAGCAACCGGGCTCGAAGATCGCTTTG 16480 29 100.0 32 ............................. CGGACCCCGAGGCCCACGAGGAGAAAAAGGCG 16419 29 100.0 32 ............................. AACCCTATCCCATTCCCAGCAATGGGAGCAGC 16358 29 96.6 33 ............................G GATCGCTACGGGGATGAGGGGCCGAGCCTGTCC 16296 29 100.0 32 ............................. CGCAGCTATGGATTGGCTGAGGTTCATCTTGA 16235 29 100.0 32 ............................. AGCGTGAGGACATGCGCGCCTACCTCGAATCC 16174 29 96.6 32 ............................G ATGGGGTTGTCTAGCGCGGCGTTGCCGATGTA 16113 29 100.0 32 ............................. ACGTAGCCCGGCCCGCGCCGCTGTATCCTCGC 16052 29 96.6 32 ............................G TGATACGAGCGGTCGAGACTACCCATGCGGTA 15991 29 100.0 32 ............................. TCAGTCGACGTCAGCCGGGCCAGGCGGAACTG 15930 29 100.0 32 ............................. CCCTAGACCTACCGGCGCGACGTGGGGGCCGA 15869 29 100.0 32 ............................. GGCAACCTTATCGCTACCCGAAACATTGGTGG 15808 29 100.0 32 ............................. CGTTGGCGAAGTACTGGCTGCATAAGCACCCC 15747 29 100.0 32 ............................. ACCACATCGCCTTAAGCCGCTGTCATTCTTTG 15686 29 96.6 32 ............................G TGGCGAATGCGCTGCCAATTCGCAGCAGTCCT 15625 29 100.0 32 ............................. CTCACTATCACTACGGATTTCCTGCATGAAAC 15564 29 100.0 32 ............................. TAAATTCAGGCCCCTCGAGGGTCGAACCCCGG 15503 29 96.6 32 ............................G CTCGAGTTGTGCACGTCAGCCCAGAGTGCGAC 15442 29 96.6 32 ............................G CTCGGCAAGGCGGCAAGCGCATGGACAACCAA 15381 29 96.6 32 ............................G CTCGGCAAGGCGGCAAGCGCATGGACAACCAA 15320 29 100.0 32 ............................. GTTGCCACGGAGTCTATCGGCGTGGGCTCTGA 15259 29 100.0 32 ............................. CAGCTTGATGACTTGAACGCAACTTTGGGCAA 15198 29 96.6 32 ............................G TCCGCGATGACGTATACGGGAACGCCGACATC 15137 29 86.2 0 .......................A.AT.A | ========== ====== ====== ====== ============================= ================================= ================== 63 29 98.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GCGAACTTGAAGTCATCGCTTCCGGTCTTAACTGGGCAGAAGAGGACACGCTGTCATGATGGTGCTGGTTGTTACTGCTTGTCCCGCTGGGCTACGGGGCGATCTGTCGAAGTGGCTCATTGAGCTGACCCCCGGTGTATTCGTCGGACGTCCTTCTGCTCGTATTCGTGATTTGCTCTGGGAGCGTACAACCGAGCTTTGTAAAGATGGGCGTGCACTTATGGTGCATTCAGCTGCGAATGAGCAGAGAATGGAGTTCAAAACTCACCGACATCATTGGGAACCCACGGATTTCGACGGGATTACCTTGATGAGGCGGCCGGCTAAGTCTAAGCAAGCACCGCGAAAGACTGGGTGGTCTCAAGCCCGACGTAACCGTAATTCTTATAAGAAACAGAAGGGCAGGTAGTAGGCCGCGCGGAGCTTCGGCAGTAGCTTCCTTAAATTACAAGTTGTACGTAGAATTGACCTAAGGCTCGAATTTCTGCTGTTCAGCAAGA # Right flank : CCTTGTTTTGGTAGCCCGAATCTACTGCTGGGCTTAGTAATCAAGATATCGTAAGGCCATCCAGCAAACAGGTTCGTCGCTTGACTGATGAGAACGGTATTCATTCCTGCTGATGCTCCACCGTCGGCTGCAGCCGCAGCATTGAACGCCATGTTCGACTGATACTGTCCTATGCCTGTGACACTTGGCTCAAGTAGAAAACCGTGCGACGCAACTTCATCGATGTGAATTTTGGTTCGCGTTTGAGCTAAGCCGAATTGTTCCGGCGGCTCCGTTCGAAGTGAAAAGGCGTGACTAACCAGCAAGAGTTGTTTCTCGTAGGACCGAGAATTGGTCTTTCGCGAGCAATTGACTAGTCTTTTGAGAGCGGGATGTCGTAGTCTACGACATGAATCCCGCGTGGGGCTATAGCTCAGTCGGTTAGAGCTCCGGACTCATAATCCGTCGGTCCCGGGTTCGAGCCCCGGTGGCCCCACGGTAGAAGGAGGCGTCGGCAAGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //