Array 1 1440973-1442063 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT963434.1 Massilicoli timonensis strain Marseille-P3755, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1440973 36 100.0 30 .................................... GCGTCTCCATAACGATTGAGATCTTTTTCA 1441039 36 100.0 29 .................................... TAAGCGAATATGCTAAACTTGCGCAACAA 1441104 36 100.0 30 .................................... ATAATTTCTTCCATTTTTTTGCTCCTTTCT 1441170 36 100.0 30 .................................... ATCGGCTTTCCCTTCCCAGTCCAATACGCA 1441236 36 100.0 30 .................................... CTTGAAAAACTATGCTCTTAATATGTTTGA 1441302 36 100.0 30 .................................... ATGCTAAACGCAACTGATTGATTGTAGCTA 1441368 36 100.0 30 .................................... ACATCAGGAATATAGACGGTATAGGTGTTA 1441434 36 100.0 30 .................................... ATAATTTCTTCCATTTTTTTGCTCCTTTCT 1441500 36 100.0 30 .................................... ATCGGCTTTCCCTTCCCAGTCCAATACGCA 1441566 36 97.2 30 ...................................T TTTGAAAAACTATGCTCTTAATATGTTTGA 1441632 36 100.0 30 .................................... ATGCTAAACGCAACTGATTGATTGTAGCTA 1441698 36 100.0 30 .................................... ACATCAGGAATATAGACGGTATAGGTGTTA 1441764 36 100.0 30 .................................... ATAATTTCTTCCATTTTTTTGCTCCTTTCT 1441830 36 100.0 30 .................................... ATCGGCTTTCCCTTCCCAGTCCAATACGCA 1441896 36 97.2 31 ...................................T GTAAGTTTTTAATATCATTTAATTTCTGCCA 1441963 36 100.0 29 .................................... TTGTGTTCTTCAAAAAATCGATCTGATCG 1442028 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.5 30 GTTTTGTTACCATATGGATTTTTGCTAGACTTAGAC # Left flank : TAGATTTCATGAGATCGATGCTAAGCAGTTATCAAAATTGCTTAATGTAAGTATTGTTCAAGATGAATTAGAGAGCAATGTAATGAATCTATCATATGAGAATTACTATACTCTTCAATTGGCAGTGCTTTATGCGATTGAGCAAGAAAAGGTATTTCAGACAGAAGTGTATTGTATCGTAAAAATGGATGTTTTAACACCAAAGATATATCATCAATTAAAAAAGTTCAAACAGATTAAGTTCATAGTTATCTTGAACCGACATGAATGTAAGATAGATGTAAAAGACATTTATTATTTCAGTTATGGAAACATACTTGATTTTGCAAATGAAAACCAAATATATGATTTGTTTTCTTATAAGTTGTTTAGAATGGAGGATATTATGAATCGAATAGATCAATATTTTAATGATGGTAGTGGAACTGGAAACAATATTGTAGATTTAATAATGAAGTAATATACCCTTTTTTCAAAATATGTGATAAAATAATTTTGAG # Right flank : TCAGAAGCATTAAAACACATGATGCAAGAGCGTTTTGTTACCATATGGATTTTGCTAGACTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTAGACTTAGACATAATTTCTTCCATTTTTTTGCTCCTTTCTGTTTTGTTACCATATGGATTTTTGCTAGACTTAGACATCGGCTTTCCCTTCCCAGTCCAATACCCAGTTTTGTTACCATATGGATTTTTGCTAGACTTAGACTTGTGTTCTTCAAAAAATCGATCTGATCGGTTTTGTTACCATATGGATTTTTGCTAGACTTAGATCAGAAGCATTAAAACACATGATGCAAGAGCGTTTTGTTACCATATGGATTTTGCTAGACTTAAACAATGAAAATAACACTTACGTTAGCGGACATCATGAAGAAAAAGGGAGTTATCCCAGCGGAACTAGCCAGAAAAAGCGGGATTTCTCCGTCGGCGATCAATCACA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTACCATATGGATTTTTGCTAGACTTAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 1442227-1442458 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT963434.1 Massilicoli timonensis strain Marseille-P3755, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1442227 36 100.0 30 .................................... ATCGGCTTTCCCTTCCCAGTCCAATACCCA 1442293 36 100.0 29 .................................... TTGTGTTCTTCAAAAAATCGATCTGATCG 1442358 36 97.2 30 ...................................T CAGAAGCATTAAAACACATGATGCAAGAGC 1442424 35 94.4 0 ..................-..............A.. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTTTGTTACCATATGGATTTTTGCTAGACTTAGAC # Left flank : CTTAGACACATCAGGAATATAGACGGTATAGGTGTTAGTTTTGTTACCATATGGATTTTTGCTAGACTTAGACATAATTTCTTCCATTTTTTTGCTCCTTTCTGTTTTGTTACCATATGGATTTTTGCTAGACTTAGACATCGGCTTTCCCTTCCCAGTCCAATACGCAGTTTTGTTACCATATGGATTTTTGCTAGACTTAGATGTAAGTTTTTAATATCATTTAATTTCTGCCAGTTTTGTTACCATATGGATTTTTGCTAGACTTAGACTTGTGTTCTTCAAAAAATCGATCTGATCGGTTTTGTTACCATATGGATTTTTGCTAGACTTAGATCAGAAGCATTAAAACACATGATGCAAGAGCGTTTTGTTACCATATGGATTTTGCTAGACTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTAGACTTAGACATAATTTCTTCCATTTTTTTGCTCCTTTCT # Right flank : CAATGAAAATAACACTTACGTTAGCGGACATCATGAAGAAAAAGGGAGTTATCCCAGCGGAACTAGCCAGAAAAAGCGGGATTTCTCCGTCGGCGATCAATCACATTTATTGGCAGTTGGGGAAGCATATCAATCTGGAATATCTTGCCAAGATCTGTAAAGCGTTAAATTGTTCTGTTTCGGATATTCTGACGATAAGCAAATGAATTTGTGATATACTATGTGTTGTATATTAAGGAGTGATTTTGTGAAAGAAATGAAATTCAGAAATATGGCCGACTTTGAAAAATACTTATATGATTTCAAAATCATCTTTGCTTATCATTCAGGTAAAATTGAAAATGAAAATATTTCTTATCACAATACAAGGGATATTTTTGAATCCGGAAAAGTCGTTGGATATACCGGTGATTTAAGAACACTCTATGAAATAGAAAATCAAAAGAATTGTTATGAATTTTTGAAGCCATATATTTTAGATAAGTATGAAATAGATATTG # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTACCATATGGATTTTTGCTAGACTTAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //