Array 1 1542594-1540614 **** Predicted by CRISPRDetect 2.4 *** >NC_021181.2 Lactobacillus acidophilus La-14, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 1542593 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 1542532 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 1542471 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 1542410 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 1542349 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 1542288 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 1542227 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 1542166 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 1542105 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 1542044 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 1541983 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 1541922 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 1541861 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 1541800 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 1541739 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 1541678 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 1541616 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1541555 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541494 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541433 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 1541372 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 1541311 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 1541250 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 1541189 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1541128 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 1541067 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541006 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 1540945 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 1540884 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 1540823 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 1540762 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 1540701 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 1540640 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //