Array 1 7607-9950 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWQW01000028.1 Streptobacillus moniliformis strain ATCC 27747 contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7607 36 100.0 30 .................................... GCCGGTATCATTCCATTTGGTTTAATTTGT 7673 36 100.0 30 .................................... AGGAATTACAAAATTTCAAGTAAACAATAT 7739 36 100.0 30 .................................... CGACTTTATTTTTTATGCAGAAAATTATAT 7805 36 100.0 30 .................................... TTTAATAGTTCAAGAGTAATGCAAATGAGA 7871 36 100.0 30 .................................... ACTTTTTTTTATTATTTTTATGTAAAACCT 7937 36 100.0 30 .................................... TTCAACTCCAAGCCTATTTATTGCCCATTC 8003 36 100.0 30 .................................... AAGGTGGCACCTTTTATAACTCAATCCCAG 8069 36 100.0 30 .................................... AGAAGCAGAAACTTATAAAAAAAGAATGTA 8135 36 100.0 30 .................................... AGTAGATGATATTATAATTAATATAATTAA 8201 36 100.0 30 .................................... TCGACAAAGAAGGAAACGAATTAAAAAAAG 8267 36 100.0 30 .................................... TGATTTAGATAAAAGACCTATAGGAGGAGG 8333 36 100.0 30 .................................... ATGTTTTTGTATTTAATCCATTAAAAACTG 8399 36 100.0 30 .................................... CAACACAGAAAAGTATGAACTTAAAAATAA 8465 36 100.0 30 .................................... AAATACTTCAAGAATTATCTAATGATATAG 8531 36 100.0 30 .................................... ATCTTCCCATTCTTTCCATAGAAGTCTGTA 8597 36 100.0 30 .................................... TCTTATTTTATATCTTCATATTTTTCTATT 8663 36 100.0 29 .................................... TCATATGAAAAATAACGGCGAATTGATTT 8728 36 97.2 30 ...............................T.... AAATAAAAAAAGATATGTATAAATTAGCTA 8794 36 100.0 30 .................................... GGCTCCCTTCATTCTTCAATCGCAAGCTAT 8860 36 100.0 30 .................................... GAGAAAAAATGGTTATTTATGTTCAAGAAA 8926 36 100.0 30 .................................... TTTTGGTGTCCTTATATTATAATTCGTGTT 8992 36 100.0 30 .................................... TCCCTCTTTTAGCTTATAATTTAATTTTTA 9058 36 100.0 30 .................................... ATTCAGTTTTTGGGAAAATGCAATAATTAA 9124 36 100.0 30 .................................... GATAAGAGAGAAGTATAACATAGGAATATT 9190 36 100.0 30 .................................... TTCAAGTAGTATCAATAAGTCAAAAACATA 9256 36 100.0 30 .................................... ATCCTTTTTTTCTTTTGTTTCATCTTTAAT 9322 36 100.0 29 .................................... ATTTAAAGAATTTGAAAATGAAATAAAAT 9387 36 100.0 30 .................................... GTCAAGTGGAAAAATTGTAACTAATTGTGA 9453 36 100.0 30 .................................... GCTGAAGAGTGGGGTCTAATAATGTCGTTA 9519 36 100.0 30 .................................... GAACGTCTAATAAATTGGCCAATTCTGGCG 9585 36 100.0 30 .................................... AGGTGAAGACATAGGAGGACAAATTTTAGA 9651 36 100.0 30 .................................... TTAATGAAGTAATGTTTATGAATGAAGATA 9717 36 100.0 30 .................................... TATTAAAAAAATTATTATTGGTGCTGAAAA 9783 36 100.0 30 .................................... AAACGGACAAAGAATTGAATGAAAAAAATG 9849 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9915 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 99.3 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : GTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATATCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //