Array 1 179489-180778 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJPU01000002.1 Streptococcus cristatus strain BCC13 D8790_contig002, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    179489	    32	 100.0	    34	................................	AGGGTATTTAGAAAGCCTAATTAGTCAATATGGA 	
    179555	    32	 100.0	    35	................................	CTATTTTATACTGTGACAGAAAGTGGAGGGGCTGG	
    179622	    32	 100.0	    34	................................	TACACGATTGACAATTATGTGAAGACAAACGCTA 	
    179688	    32	 100.0	    34	................................	ATTGGATAATATTTAACTATCATCTTCCGAATGA 	
    179754	    32	 100.0	    35	................................	ATCAAGGTAATAAGATTGAGTTTGGATGTAGTATT	
    179821	    32	 100.0	    34	................................	ATAGCATTTACATTGTCATTCCGCCTAAGTTCCA 	
    179887	    32	 100.0	    34	................................	CTAATTTTACTACTGAACATTTCCAAGCTAACAA 	
    179953	    32	 100.0	    34	................................	ACAAGCTGAGATAATTTCAGGGTTTGTGTATTTC 	
    180019	    32	 100.0	    35	................................	GTAAGCGCAAGTCATTATTTTCAAAAGGGGCGGAC	
    180086	    32	 100.0	    34	................................	GGATTTAGAAAGGAATTAAAAATGAAAAATGAAA 	
    180152	    32	 100.0	    34	................................	TGATCGCTTAGTTTTTCAACATTTTTCGTATAAA 	
    180218	    32	 100.0	    34	................................	AGGAATATCACCTGTGATGCGCGTAATACGAGAA 	
    180284	    32	 100.0	    33	................................	ACACTCCAGGTAAACCACAACCCAACAAACCAA  	
    180349	    32	 100.0	    35	................................	GCTAAAGATAACTACACAATGCTCGACAACCTAAA	
    180416	    32	 100.0	    34	................................	TGGTCGAAAATTACCCGTAAATGAAAAAGTACTC 	
    180482	    32	 100.0	    35	................................	TTCCCAAAAACCAACTAAGATGCTGACAAATGTCT	
    180549	    32	 100.0	    34	................................	TCGAAGCCGTGTCGAGTATCAGAATTGATTTTAT 	
    180615	    32	 100.0	    35	................................	GTGGTTATTTCGGTAGGCTTCGGCAGAATGATCCA	
    180682	    32	 100.0	    34	................................	AAATAATCAGGGATTTCATCCCCTACATTTAAAC 	
    180748	    31	  87.5	     0	..................A........-..GC	|                                  	
==========	======	======	======	================================	===================================	==================
        20	    32	  99.4	    34	GTCGCTCCCTTCACGGGGGCGTGGATTGAAAT	                                   	       

# Left flank :   CCAAGACAATCCGTGGAGAATTGGAATCCTATCCACCGTTTTTAATATAGGAGCCGGTTTATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCGCAAGGCAGGAAAAGATTACGTCATGTGGCAAAATTATGCGTTGATTATGGGCAACGCGTTCAGAATTCAGTTTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAAGCTAAGCTTTTGAGTATAATTGACACTGAGTCCGACAGTATTCGTTTTTATTTGCTAGGAAAAAACTGGCAAAATCGTCTAGAAACGATTGGACGTGATACAAGTTATGATCCTGATATAGGGGTATTACTCCTTTAAATAGTCTAGTGCGAATGGATGTTACTCAGAAAAAAGCAGGACTTTCGCGCAAAAAATAAACAAAAATAAGGCAAAAATTCGAAATTCTAGAAGAGTTTACTTTCCTCGAAAGATAATTTTTGCCTAAAACAGTGCAACTACGCGCT
# Right flank :  CATTGGCTGACAGACTTGTTGTCTGTCGCTCCCTCCCAGAATGTGTTTTTTCATGAAGCCACTGTAATTAACAAAGAGCTAACCTCTCCTTTTGGTTGAAAGGTTATTTGTCAGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACGACACGAAGCTCCCCATAGTCAAATAAATCCGATTCTTGAAAGGAGAGTCGGATTTTAGTTATGTTTGATTTCGATTTTCTTACTATAACTTTTTTGTAATTTCTGGTTGTATTTTTTTAAAATTCTGCTATAATGGTATAATATTTATTTAGGAGGAAGAGAATGAGCTATATTTTGGAAATTTTACCTAGTCTTCTAAGTGGAGCGGCAACTACCTTGCAGGTGTTTGCTTTGGTCTTGGTTTTTTCGATTCCTTTGGGAATTATGCTGGCATTTTCAATGCAAATTCGCTTGAAGCCCCTGCAATGGCTGCTCCATATTTACATTTGGATTATGCGTGGGACGCCGCT

# Questionable array : NO	 Score: 9.23
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCTTCACGGGGGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.40,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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