Array 1 1195446-1197658 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059404.1 Corynebacterium incognitum strain Marseille-Q3630 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1195446 36 86.1 28 A.C....G...GC....................... ACCGGGAAGCCCCGCCGTAAATACCTCT 1195510 36 100.0 28 .................................... ATGAACACCAACCACCCGTCAACCACCA 1195574 36 100.0 28 .................................... TCTACTCATCGTCCCGCTCCCTATCTAG 1195638 36 100.0 29 .................................... ACAGGTGAGATGGCCGTCATCGCGGACCA 1195703 36 100.0 28 .................................... CTTACGAGCAACAGCATCACGGTCATCC 1195767 36 100.0 28 .................................... AATCGTGACCAGTACGCCCGCGTCCTCA 1195831 36 100.0 28 .................................... TAAGCCGCGCCAGCAACCCAGACTCATC 1195895 36 97.2 28 .......................G............ CACCGCGGGGAACCGCGTCCTGGTACAT 1195959 36 100.0 28 .................................... CCGGGATACGCCCATCATCCACGCACCG 1196023 36 100.0 28 .................................... CGCCCCATGATCCCAACCTTCGGCCCAT 1196087 36 100.0 28 .................................... GTTACGCACCAGACGAATCACTGCATCA 1196151 36 100.0 28 .................................... AACTTAGAGTTGCGTGAGTCCAGGTGGA 1196215 36 100.0 28 .................................... CGCCGCATCCACGAGTACTGGGCGACGT 1196279 36 100.0 28 .................................... CTCCCAGCCATCGCAGATGAGCTAGAGG 1196343 36 97.2 28 ...........................G........ GCGAACGTGTGGAACCGCGCCCGTGAAG 1196407 36 100.0 28 .................................... GGTGTCCCCCGCGTTGAGTGCGTCGATG 1196471 36 100.0 28 .................................... CATGAAGTTTCACCCCCGCGTCACCGAG 1196535 36 100.0 28 .................................... GTCGGCGACGGAACAAGCCCTTTTCCAT 1196599 36 100.0 28 .................................... CTGGCTGACCGGCGCGCTCGCTACCAGC 1196663 36 100.0 28 .................................... GCATGGCCTGGGATAACGGAGGGCAACC 1196727 36 100.0 28 .................................... AGTTCAGCGACATACCGCGGTGCGGCAG 1196791 36 100.0 28 .................................... CCAGGACACCTACCCACTGCCCCTCATC 1196855 36 100.0 28 .................................... AAAGCACTAGAACCATGACCCCACACGA 1196919 36 100.0 28 .................................... ACACCCGTATCCTTGCCATCCTGCGTGC 1196983 36 100.0 28 .................................... GGGAAAGGAATCTTCATCGTCACGGACT 1197047 36 100.0 28 .................................... GACCATCGCATCTGGATGGAGCTGGAAC 1197111 36 100.0 28 .................................... TTCTCGTCCAGGTTAATCTCCTGGTACT 1197175 36 100.0 28 .................................... GGATGCGTTACCGCGAGCTGCTCGCTCT 1197239 36 100.0 28 .................................... TGTTAGTCACGGTTGTCTCCTTTTCTGT 1197303 36 100.0 28 .................................... GTTTCCGCCGCCGCAAGCTCCGGCAACT 1197367 36 100.0 28 .................................... CAAACGGGCCAGCCGTCACAGACTCGGA 1197431 36 100.0 28 .................................... CAAACGGGCCAGCCGTCACAGACTCGGA 1197495 36 100.0 28 .................................... GGGTGCAGGTGCGTGAAGATTTTTCTAC 1197559 36 100.0 28 .................................... ATCTGCATCCCGCCAAGGGTTGATGCAT 1197623 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 35 36 99.4 28 GCTGGGGTTCAATTCTCGAAACCCCTGATAGACTTC # Left flank : TTGGGCGGCATTGAGACTGACTTGGACGGCCAGTGCCTCACTGACACCGGCCAACCCATCCCCGGCCTGTACGCTTGCGGCGAGGCCGCCGGTTTCGGCGGCGGAGGCATGCACGGCAAAAACGCCCTGGAAGGCACCTTCCTCGGCGGCTGCATCCACTCCGGCAAGCGCGTCGGCGAAGCCCTGGGCGCGTTCGGTCATTAGGACTCACTTACACCCTCAGTGGCACCTTCATGTGCAGAGTTGTAATACTCAGTGGGAATTTACAACAAGATTCCCACTGAGCTTTCTCAATTCCCACTGAGAACAACAGTAGAGGTCAGGCCACTATTTTCCCTTGTCAACTGCATCACTTGGAATCCATTTTTGGCGTTTTCCCACTGAAGAATCATTTCCAACTCTCACCAAAACAAGCGAACCATCAGGACCGCTCCGCTGCTTAGCCGGTTCCGCGAGACCCAATCACTCCAAGCACGCAGGGCTACGAAAACGGAGAGAAC # Right flank : CAGTTAAGTCGAAAAATCGCCTTTAACTGGGGTCTTTTCGGGGTCCCTTCGTCAAAAAATGGTCATTTGTGTTGGAGTTTCTTCCGTTTTGGCTTCTTGCGCACGAGAAAAGCGAATCGCTTTTGCCCACTGAACGTCAGTGACGCTGATAATTCGGATGTCGCCGCCGCGCGGGAGCTGCGTTTTGAGTATCTTAACTACGTTTGCGACCCTTGCAGCGAGTGGGAAGTATTGGACATAGACACTGAATTGTGCGCGACCGAACCCAAGGTCTTGCAATTGGTTCCTAAATCGAGTGGCTTCCGATCGTTCACGTTTGGTACCTACTGGTAAATCAAACATTACAATGCACCACACTGGCTCTTTACCTTTCGCTGGCATTGAGCTCGCCATCCCATTTGGGAACATCTAATGTTGGCACATCCAACTCGACATATTTTCCGTAAAGCTGTGCGAACTCGACAAACACCGTTGGAATTGTTTTGCCGCTACGAGAGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAATTCTCGAAACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.42 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //